HMMER3/b [3.0 | March 2010] NAME Defensin_beta_2 ACC PF13841.1 DESC Beta defensin LENG 30 ALPH amino RF no CS no MAP yes DATE Sat Oct 6 10:25:48 2012 NSEQ 114 EFFN 39.684998 CKSUM 3667415889 GA 22.20 22.20; TC 22.20 22.20; NC 22.10 22.10; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.8086 0.71988 STATS LOCAL VITERBI -8.0083 0.71988 STATS LOCAL FORWARD -3.5906 0.71988 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 3.34098 1.66373 3.51546 2.63269 3.71684 2.65877 3.70465 3.26800 2.38248 2.93663 4.12144 3.12443 3.64002 3.39877 2.51158 3.02749 3.24017 3.45731 4.57963 3.19933 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.00000 * 1 3.42343 6.92615 3.05489 2.65795 4.50417 5.18708 5.37404 2.58067 1.36033 5.23177 5.96659 4.65425 3.90236 3.09604 1.65693 1.95989 2.70841 4.48560 7.35834 5.94690 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 2 5.66494 0.04114 8.03806 8.11021 8.30771 6.28361 8.47655 8.04743 8.00911 7.65708 8.45072 7.30969 7.14534 8.06712 7.85368 3.59835 6.26726 7.04955 9.36592 8.61777 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 3 2.44725 6.84049 4.19543 2.71733 2.71162 2.83176 5.40299 4.60079 2.85582 2.80443 3.81543 3.40584 3.97006 2.91309 3.15099 2.44518 3.50985 3.15733 1.57157 3.34435 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 4 3.88783 6.90648 4.67212 2.96399 6.24330 2.81828 3.01882 3.51616 1.99869 2.42694 3.49039 1.80230 5.58573 3.87257 2.10466 2.46808 3.18134 4.23676 7.34414 2.65540 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 5 4.07883 6.90201 2.36451 2.77670 3.95517 2.18656 4.50620 3.02085 2.17607 1.98797 2.96042 2.32503 4.09257 3.58284 2.70620 3.80825 3.52584 2.98064 7.34090 3.90068 5 - - 2.68698 4.42305 2.77599 2.73203 3.46099 2.40593 3.72574 3.29140 2.67821 2.69435 4.24770 2.90254 2.73819 3.18226 2.89881 2.37928 2.77419 2.98353 4.58557 3.60771 0.23304 1.83096 3.04451 0.22435 1.60464 0.48576 0.95510 6 4.37221 6.87529 3.81830 3.07560 3.60063 3.01407 3.09323 3.38677 2.61033 2.44495 3.50331 2.76244 3.17272 2.02724 2.10078 2.75828 2.61620 3.81377 7.30989 2.91863 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00107 7.23608 7.95843 0.61958 0.77255 0.18225 1.79213 7 3.01580 6.98095 7.22381 7.07367 7.48830 0.14970 7.60843 7.13341 6.50261 4.50344 7.58093 6.58627 6.64183 7.00901 3.41568 4.30624 5.65289 6.32395 8.82794 4.06198 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 8 3.28216 6.66133 4.83609 3.32420 4.77553 5.27303 2.02902 2.66298 2.41292 2.94421 3.81723 3.01474 5.66302 3.23325 1.97329 3.33424 2.35883 2.79094 7.16089 2.16273 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 9 8.37149 0.00283 8.65567 8.74750 9.24176 7.66491 9.24931 9.64131 8.92368 8.71626 10.05039 9.01069 8.31587 9.22520 8.66281 8.73515 8.82168 9.20537 9.55277 9.48494 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 10 5.20491 7.54712 4.04240 3.14863 7.01754 5.88198 5.86223 6.40042 1.57335 5.79330 3.96405 5.35419 6.23988 4.16419 0.46438 5.16430 4.48682 3.63305 7.82058 6.57918 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 11 2.80662 6.92688 2.80870 2.92862 4.35788 3.76900 2.95814 5.75992 1.40530 3.06387 3.32946 2.84539 2.77774 3.45051 2.49034 2.96340 2.76862 2.92709 7.35886 5.94720 13 - - 2.68634 4.42242 2.77536 2.73140 3.46370 2.40344 3.72511 3.29371 2.67757 2.69371 4.24706 2.90363 2.73756 3.18163 2.89817 2.37903 2.77536 2.98535 4.58493 3.61520 0.04315 3.17254 8.00687 0.07040 2.68862 0.48576 0.95510 12 3.54682 6.91591 3.57655 2.14307 3.51061 5.18983 2.96143 3.16734 1.63125 3.69365 4.02531 3.01830 5.58321 3.36269 2.62132 2.29396 2.59793 2.73573 7.35095 2.87506 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 13 7.64073 0.02467 8.56822 8.61427 9.05137 7.45755 9.08131 9.32292 8.48603 8.52615 9.72684 8.66393 8.15091 8.91655 3.88364 7.92023 8.15993 8.71619 9.50669 9.26115 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 14 3.82899 6.92287 3.65508 3.61862 4.51052 3.18532 2.55754 3.58133 1.85919 1.72145 4.44430 2.53200 4.28284 2.90229 1.79075 3.26853 3.69333 5.31313 7.35598 3.29658 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 15 2.54154 6.92636 2.42651 2.22553 6.27236 4.50958 3.88125 3.56964 1.61509 3.40093 4.69754 3.68646 2.36094 3.64374 3.12367 2.10306 3.10096 3.14019 3.99623 5.94698 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 16 4.41394 6.92230 2.50173 2.41305 2.96145 1.83101 5.37523 4.13386 2.76242 3.59806 5.96322 1.81666 5.58153 2.73908 3.12172 2.37090 2.91346 3.65422 3.83875 3.93443 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 17 6.09530 9.05798 3.51592 0.08786 8.24983 5.97489 6.72977 7.92560 6.08307 7.30762 8.32301 5.40432 3.93106 4.28325 6.96093 5.85270 6.44670 7.39456 9.45722 7.70401 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 18 3.53357 6.55478 3.59730 2.86704 3.22364 5.31739 3.58112 2.18890 2.11604 2.96106 2.87476 4.87867 5.70547 2.97390 2.48906 3.68681 2.39912 2.37581 7.07784 2.14429 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 19 2.40301 6.86751 3.80324 2.90273 3.07095 5.20358 3.25820 2.61882 2.56086 2.72347 3.55781 3.90211 2.90044 2.19620 2.38938 2.79461 3.91038 2.89121 7.31578 2.50985 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 20 3.13384 6.26276 4.63865 3.15961 3.25438 5.48250 3.48784 1.42953 2.64280 2.75354 3.49209 4.09398 5.86270 3.73887 4.39816 2.72054 2.49294 2.23751 6.84089 2.18495 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 21 2.47563 6.85363 2.74477 2.81329 3.11852 1.33972 3.40575 2.80360 2.66832 3.09704 4.15185 3.91963 5.60036 3.66379 3.31410 3.25307 4.18224 2.71209 7.30560 2.92199 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 22 3.20090 6.33341 4.10209 4.65507 2.04270 2.70602 3.38966 3.41559 3.23386 1.85974 3.53617 3.27612 2.45631 4.94364 2.96207 3.89043 3.36041 4.61785 6.89939 1.63096 25 - - 2.68550 4.42450 2.77744 2.73348 3.46579 2.40149 3.72518 3.29579 2.67642 2.69161 4.23518 2.90571 2.73871 3.18371 2.89770 2.38035 2.77448 2.98612 4.56386 3.61728 0.19121 1.75037 8.00687 1.15654 0.37771 0.48576 0.95510 23 6.06338 0.07361 8.19949 8.27465 3.86449 3.22715 8.38939 8.20791 8.22217 7.67852 8.64384 7.61262 7.42237 8.28075 8.04297 6.29106 6.65568 7.36017 8.89881 7.63780 30 - - 2.68255 4.42331 2.77625 2.73229 3.46171 2.40619 3.72600 3.29172 2.67847 2.69461 4.24586 2.90453 2.73845 3.18252 2.89522 2.37838 2.77433 2.98624 4.58583 3.61474 0.26997 1.65744 3.07966 0.32691 1.27707 0.48576 0.95510 24 3.01021 6.88607 2.89057 2.00316 6.23226 2.46250 5.33308 5.71903 2.45914 2.79944 3.70311 3.56118 2.16351 2.83639 2.11084 2.63633 3.29927 3.04010 4.53179 5.90644 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00107 7.23780 7.96015 0.61958 0.77255 0.18628 1.77221 25 3.51149 6.91693 2.75460 3.62755 4.74181 5.18955 3.52325 2.69894 1.95150 2.60979 4.77709 1.50477 2.52865 3.80233 2.76500 2.60722 3.24624 5.30570 4.74815 3.49293 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 26 2.75138 5.12840 4.16712 3.09718 3.12942 1.68121 3.33172 4.64677 2.67901 2.88130 4.82995 2.50736 5.59534 3.16791 2.71741 2.59750 2.58048 3.23402 3.58243 2.97738 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 27 2.79055 6.92317 3.56195 3.60896 3.03456 4.12288 3.56268 3.78409 1.63969 2.80143 5.96397 3.48872 3.30126 2.70043 2.16677 3.24254 2.04963 4.37486 7.35619 2.53492 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 28 2.82059 6.52290 3.75721 3.95875 2.93120 5.33203 3.95678 2.02396 2.04276 1.68726 3.53184 3.24082 2.90365 3.60957 3.01064 3.15744 4.69689 2.78577 7.05262 2.83580 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00102 7.28452 8.00687 0.61958 0.77255 0.48576 0.95510 29 8.37149 0.00283 8.65567 8.74750 9.24176 7.66491 9.24931 9.64131 8.92368 8.71626 10.05039 9.01069 8.31587 9.22520 8.66281 8.73515 8.82168 9.20537 9.55277 9.48494 38 - - 2.68633 4.42240 2.77535 2.73138 3.46369 2.40357 3.72510 3.29369 2.67756 2.69370 4.24705 2.90362 2.73755 3.18162 2.89816 2.37902 2.77535 2.98534 4.58492 3.61518 0.03979 3.25246 8.00687 0.07561 2.61970 0.48576 0.95510 30 7.63962 0.02566 8.53404 8.61614 7.20506 7.48148 8.39841 8.81678 8.68264 7.95714 9.27830 8.50416 8.15017 8.81256 8.44820 7.86826 8.13566 8.43299 8.58771 3.89978 40 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00069 7.28419 * 0.61958 0.77255 0.00000 * //