# STOCKHOLM 1.0 #=GF ID Keratin_B2_2 #=GF AC PF13885.1 #=GF DE Keratin, high sulfur B2 protein #=GF AU Coggill P #=GF SE Jackhmmer:Q6L8G4 #=GF GA 23.00 10.00; #=GF TC 23.00 10.00; #=GF NC 22.80 9.90; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF SQ 95 #=GS KRA91_HUMAN/80-122 AC A8MXZ3.1 #=GS KRA96_HUMAN/80-124 AC A8MVA2.1 #=GS KRA98_HUMAN/65-109 AC Q9BYQ0.2 #=GS Q6R637_CAPHI/57-98 AC Q6R637.1 #=GS KRA92_HUMAN/32-75 AC Q9BYQ4.2 #=GS Q64526_MOUSE/118-164 AC Q64526.1 #=GS Q8CAY5_MOUSE/64-107 AC Q8CAY5.1 #=GS KR291_HUMAN/115-159 AC A8MX34.1 #=GS KR291_HUMAN/165-209 AC A8MX34.1 #=GS D2HIQ1_AILME/153-197 AC D2HIQ1.1 #=GS D2HIQ2_AILME/253-297 AC D2HIQ2.1 #=GS D2HB39_AILME/26-71 AC D2HB39.1 #=GS KR105_HUMAN/199-244 AC P60370.2 #=GS D3ZKB5_RAT/71-114 AC D3ZKB5.1 #=GS A2A4L9_MOUSE/69-113 AC A2A4L9.1 #=GS D3ZV25_RAT/107-151 AC D3ZV25.1 #=GS D2HR48_AILME/30-74 AC D2HR48.1 #=GS Q9D122_MOUSE/68-114 AC Q9D122.1 #=GS D3ZMV5_RAT/79-121 AC D3ZMV5.1 #=GS KR104_HUMAN/349-395 AC P60372.1 #=GS Q14C04_MOUSE/24-68 AC Q14C04.1 #=GS A2A4M2_MOUSE/84-127 AC A2A4M2.1 #=GS A6NFW2_HUMAN/170-213 AC A6NFW2.3 #=GS D3ZEA5_RAT/163-207 AC D3ZEA5.1 #=GS D3ZNL6_RAT/173-218 AC D3ZNL6.1 #=GS D3ZTU8_RAT/141-185 AC D3ZTU8.1 #=GS A6NC61_HUMAN/114-158 AC A6NC61.4 #=GS A4IF42_MOUSE/141-185 AC A4IF42.1 #=GS A8MPS1_HUMAN/106-150 AC A8MPS1.1 #=GS D3ZRR1_RAT/101-148 AC D3ZRR1.1 #=GS KRA91_HUMAN/37-79 AC A8MXZ3.1 #=GS A2A5X3_MOUSE/232-274 AC A2A5X3.1 #=GS KRA44_HUMAN/115-159 AC Q9BYR3.1 #=GS KRA46_HUMAN/130-174 AC Q9BYQ5.3 #=GS B1AQA8_MOUSE/109-152 AC B1AQA8.1 #=GS KR412_HUMAN/110-154 AC Q9BQ66.1 #=GS KRA93_HUMAN/56-99 AC Q9BYQ3.1 #=GS D2HR47_AILME/5-49 AC D2HR47.1 #=GS Q6R637_CAPHI/14-56 AC Q6R637.1 #=GS A2A5X3_MOUSE/75-120 AC A2A5X3.1 #=GS A6QQG8_BOVIN/23-64 AC A6QQG8.1 #=GS B6CQV3_CAPHI/24-66 AC B6CQV3.1 #=GS D3YXB3_MOUSE/75-119 AC D3YXB3.1 #=GS D3ZMN9_RAT/29-73 AC D3ZMN9.1 #=GS D3ZDT9_RAT/84-128 AC D3ZDT9.1 #=GS B1AQ90_MOUSE/79-123 AC B1AQ90.1 #=GS D3ZD90_RAT/103-146 AC D3ZD90.1 #=GS D4A5R4_RAT/44-88 AC D4A5R4.1 #=GS KRA44_HUMAN/70-114 AC Q9BYR3.1 #=GS KRA42_HUMAN/85-129 AC Q9BYR5.2 #=GS KRA45_HUMAN/105-150 AC Q9BYR2.4 #=GS D3ZV25_RAT/47-91 AC D3ZV25.1 #=GS D3ZDA4_RAT/130-174 AC D3ZDA4.1 #=GS B1AQA9_MOUSE/178-222 AC B1AQA9.1 #=GS D3ZMN9_RAT/133-177 AC D3ZMN9.1 #=GS D4A8A6_RAT/73-116 AC D4A8A6.1 #=GS A2A4M0_MOUSE/24-68 AC A2A4M0.1 #=GS D3ZJ72_RAT/72-115 AC D3ZJ72.1 #=GS D3Z5T3_MOUSE/78-123 AC D3Z5T3.1 #=GS D2HJK5_AILME/29-73 AC D2HJK5.1 #=GS KR121_MOUSE/19-63 AC Q9Z287.1 #=GS KR106_HUMAN/265-311 AC P60371.2 #=GS D3ZDD4_RAT/137-184 AC D3ZDD4.1 #=GS D4A8T7_RAT/139-184 AC D4A8T7.1 #=GS Q08EG8_MOUSE/27-71 AC Q08EG8.1 #=GS D3ZGU7_RAT/27-65 AC D3ZGU7.1 #=GS D4A2F4_RAT/27-71 AC D4A2F4.1 #=GS D3ZDU4_RAT/27-71 AC D3ZDU4.1 #=GS D4A3Q1_RAT/42-85 AC D4A3Q1.1 #=GS B9EIL2_HUMAN/41-85 AC B9EIL2.1 #=GS KR121_HUMAN/24-68 AC P59990.1 #=GS A0JN45_BOVIN/96-140 AC A0JN45.1 #=GS KR108_BOVIN/111-155 AC A6QP35.1 #=GS A8QW00_BOVIN/128-172 AC A8QW00.1 #=GS D4A8P6_RAT/91-136 AC D4A8P6.1 #=GS KR103_HUMAN/84-128 AC P60369.2 #=GS Q148I6_BOVIN/91-135 AC Q148I6.1 #=GS KR10D_HUMAN/193-237 AC A8MUX0.1 #=GS D2HIQ2_AILME/193-237 AC D2HIQ2.1 #=GS KR105_HUMAN/60-102 AC P60370.2 #=GS A0JN45_BOVIN/141-186 AC A0JN45.1 #=GS D4A2F4_RAT/73-117 AC D4A2F4.1 #=GS KR101_HUMAN/71-113 AC P60331.2 #=GS D3ZUG4_RAT/130-173 AC D3ZUG4.1 #=GS D3ZNY7_RAT/180-226 AC D3ZNY7.1 #=GS A6QQG8_BOVIN/120-162 AC A6QQG8.1 #=GS D3ZD90_RAT/24-64 AC D3ZD90.1 #=GS KRA98_HUMAN/18-60 AC Q9BYQ0.2 #=GS B1AQ90_MOUSE/24-68 AC B1AQ90.1 #=GS B1AQA9_MOUSE/24-68 AC B1AQA9.1 #=GS KRA45_HUMAN/25-69 AC Q9BYR2.4 #=GS D3YXB6_MOUSE/83-125 AC D3YXB6.2 #=GS KR10D_HUMAN/128-172 AC A8MUX0.1 #=GS KR10D_MOUSE/88-132 AC A2A5X5.1 #=GS KR10D_HUMAN/68-112 AC A8MUX0.1 KRA91_HUMAN/80-122 CCSTP.CCQPTC..CGSSCC.GQ..TS...CGSSCC..Q.PIC.GS.SC....CQ..P...CC.HPT KRA96_HUMAN/80-124 CCSTP.CYQPIC..CGSSCC.GQ..TS...CGSSCG..Q.SSSCAP.VY....CR..RT..CY.HPT KRA98_HUMAN/65-109 CCQPS.CCSTPC..CQPTCC.GQ..TS...CGSSCG..Q.SSSCAP.VY....CR..RT..CY.HPT Q6R637_CAPHI/57-98 CCSKP.CCQPTC..CESICC.QP..S....CPPACY..Q.TS..ET.TC....CR..TT..CH.KPT KRA92_HUMAN/32-75 CSSTP.CCQPAC..CVSSCC.QP..C....CRPTCC..Q.NTCCRT.TC....CQ..PT..CV.TSC Q64526_MOUSE/118-164 CCQP..CCRPSC..CQSSCC.RP..CCQPFCLNLCC..Q.PACSGP.VT....CT..RT..CY.QPT Q8CAY5_MOUSE/64-107 CCPPT.CCDPAS..CDSNCC.KP..T....CVTICC..S.TPCCQP.SC....CV..PT..CC.QPS KR291_HUMAN/115-159 CCQEK.CCDASP..CQQSSC.QE..SV...CMSGSC..Q.AACGQS.VC....CD..AG..SC.QPS KR291_HUMAN/165-209 SCPET.SCLPTI..CTASPC.QP..TW...CQGSSC..Q.PVSGEG.QP....CK..ST..YY.QPI D2HIQ1_AILME/153-197 PCMPV.PCQPST..CVFSSC.NP..TC...YVSSPC..Q.PLHCQP.AP....SI..SF..IC.QPV D2HIQ2_AILME/253-297 CCDPS.PCEPSC..SESSNC.QP..AS...CVALVC..E.PVCLRP.VC....CI..SS..PC.EPP D2HB39_AILME/26-71 CSAPS.CCQPSP..CSSSCC.TP..SS...CVSLLC..R.PVC.RP.AC....CV..PASPCC.APA KR105_HUMAN/199-244 CCQQS.SCQPAC..CTTSCC.RP..SS...SVSLLC..R.PIC.RP.AC....CVPISS..CC.APA D3ZKB5_RAT/71-114 CCRPV.CCQTTC..CQSSCC.RP..TT...CRPSCG..V.SSCCRP.VC....CQ..T...TC.RPS A2A4L9_MOUSE/69-113 CCRPS.CCRPSC..CRPSCC.RP..SC...CQPSCC..V.SSCCKP.SC....CV..SS..CC.RPS D3ZV25_RAT/107-151 CCQSV.CCRPSC..CISSCC.RP..SC...CRPSCC..V.SSCCRP.SC....CI..SS..CC.RPC D2HR48_AILME/30-74 CCRTT.CCRPSC..CVSSCC.RP..SC...GGSSCW..G.SSCCRP.SC....CI..SS..CC.RPS Q9D122_MOUSE/68-114 CCQPT.CCRPSC..CISSCC.QP..SC...GSSSCC..G.SSCCRP.CCR..PCC..SP..CC.SPC D3ZMV5_RAT/79-121 CCVSS.CCQP.C..CRPSCC.QP..C....CRPSCC..E.SSCCQP.RC....CI..SS..CC.QPC KR104_HUMAN/349-395 CCTTS.CCRPSS..SVSLLC.RP..V....CRPACCVPV.PSCCAPTSS....CQ..PS..CC.RPA Q14C04_MOUSE/24-68 CCVSS.CCRPQC..CQSVCC.QP..TC...CRPSCC..I.SSCCRP.SC....CR..PS..CC.RPS A2A4M2_MOUSE/84-127 CCQP..CCQPSC..CQSSCC.QP..SC...CQPSCC..Q.SSCCQP.SC....CQ..SS..CC.QPR A6NFW2_HUMAN/170-213 CCKPY.CCQSSC..CKP.CC.SS..SG...CGSSCC..Q.SSCCNP.CC....SQ..SS..CC.VPV D3ZEA5_RAT/163-207 CCAPV.CCQCKI..CTPACC.KS..SC...CSPSCC..Q.SSCCKP.CC....CQ..SS..CC.KPC D3ZNL6_RAT/173-218 GCGSS.CCQSSC..CKPCCC.QS..SC...CKPCCC..Q.SSCCKP.CC....SS..GS.GCN.DPM D3ZTU8_RAT/141-185 CCQSS.CCKPCC..CQSSCC.KS..SC...CKPCCC..Q.SSCCKP.CC....SS..SS..CN.APM A6NC61_HUMAN/114-158 CCNPC.CCQSSC..CVPVCC.QS..SC...CKPCCC..Q.SSCCVP.SS....CC..RS..CC.SKS A4IF42_MOUSE/141-185 CCKPC.CCQSSC..CKPCCC.QS..SC...CKPCCC..Q.SSCCKP.CC....CQ..SS..CC.RPC A8MPS1_HUMAN/106-150 CSKPC.CCQSSC..CQSSCC.KP..CC...CQSSCC..Q.SSCFKP.CC....CQ..SS..CC.VPV D3ZRR1_RAT/101-148 CCVPS.CCQPSC..CQL.CF.LP..TC...CETSCC..K.TTSIKP.TCVVLGCS..TP..CC.QPC KRA91_HUMAN/37-79 CCQPS.CCVPSC..CQP.CC.HP..TC...CQNTCC..R.TTCCQP.TC....VA..S...CC.QPS A2A5X3_MOUSE/232-274 CCRTT.CCKPTC..VI.SCC.QP..SC...CETTCC..R.TTCCKP.TC....VI..S...CC.QPS KRA44_HUMAN/115-159 CCQPT.CCCPSY..CVSSCC.RP..QC...CQTTCC..R.TTCCRP.SC....CV..SR..CY.RPH KRA46_HUMAN/130-174 CCQPT.CCRPSC..CISSCC.RP..SC...CESSCC..R.PCCCRP.CC....CL..RP..VC.GRV B1AQA8_MOUSE/109-152 CCRPS.CCRPSC..CVSSCC.RP..SC...CISSCC..R.P.CCRP.CC....GS..SS..CC.GSS KR412_HUMAN/110-154 CCRTT.CCRPSC..CVSSCC.RP..QC...CQSVCC..Q.PTCCRP.SC....CI..SS..SC.CPS KRA93_HUMAN/56-99 CCRTT.CCQPI...CVTSCC.QP..SC...CSTPCC..Q.PTCCGS.SC....GQ..SS..SC.APV D2HR47_AILME/5-49 CCGSV.CSDQGC..GQETCC.HP..TC...CQTTCC..R.TTCCRP.SC....CV..SS..CC.RPS Q6R637_CAPHI/14-56 CCRTT.CSEFSC..CQP.CC.PP..TC...CQTTCC..R.TTCCKP.TC....VT..S...CC.QPT A2A5X3_MOUSE/75-120 CCSPP.CCQPSC..CETTCY.RT.TCC...CYKPTC..A.TNCCQP.SC....YE..TT..CC.KPA A6QQG8_BOVIN/23-64 CCPPT.CYQTS....ENTCC.RT..TC...CKPTCV....TTCCQP.NC....GR..SS..CC.QPC B6CQV3_CAPHI/24-66 CCQP..CCPTTC..CQTTCC.RT..TC...CKPTCV....TSCCQP.TC....CE..SI..CC.QPS D3YXB3_MOUSE/75-119 CCRPS.CCISSC..CRPSCC.RP..SC...CVSSCC..R.PQCCQS.LC....CQ..PT..CC.RPS D3ZMN9_RAT/29-73 CCRTT.CCRPSC..CVSSCC.RP..SC...CVSSCC..R.PSCCQS.VC....CQ..PT..CC.RPS D3ZDT9_RAT/84-128 CCRPS.CCTSSC..CRPCCC.RP..SC...CISSCC..R.PSCCIS.SC....CR..PS..CC.RPC B1AQ90_MOUSE/79-123 CCQSV.CCQPTC..CRPSCC.RP..SC...CISSCC..Q.PSCGSS.SC....CG..SS..CC.RPC D3ZD90_RAT/103-146 CCQSS.CCQPSC..CQSSCC.QP..RC...CISSCC..Q.P.CCQS.SC....CQ..PS..CC.KPC D4A5R4_RAT/44-88 CCRPQ.CCQSVC..CQPTCC.RP..SC...CRPSCC..I.SSCCRP.SC....CR..PS..CC.VPQ KRA44_HUMAN/70-114 CCRPQ.CCQSVC..CQPTCC.RP..QC...CQTTCC..R.TTCCRP.SC....CR..PQ..CC.QSV KRA42_HUMAN/85-129 CFRPQ.CCQSVY..CQPTCC.RP..SC...GQTTCC..R.TTCYRP.SC....CV..ST..CC.RPT KRA45_HUMAN/105-150 CCRPQ.CCQSVC..CQPTCC.RP..SC...CISSCC..H.PSCCES.SC....CR..PC..CCVRPV D3ZV25_RAT/47-91 CCRPS.CCQSVC..CQPTCC.RP..SC...CVSSCC..Q.PTCCRP.SC....CI..SS..CC.RPS D3ZDA4_RAT/130-174 CCRPS.CDKTTC..CRTTCC.RP..SC...CVSSCC..R.PSCCRP.SC....CV..SS..CC.RPS B1AQA9_MOUSE/178-222 CCRPC.CGSSSC..CGSSCC.RP..SC...CRPSCC..V.SSCCRP.QC....CI..SS..CC.RPT D3ZMN9_RAT/133-177 CCRPC.CGSSSC..CGSSCC.RP..TC...CISSCC..R.PSCCCP.SC....CV..SG..CC.RPH D4A8A6_RAT/73-116 CCRPV.CCQTTC..CQSSCC.RP..VC...CQTT.C..R.PSCGVS.SC....CR..PV..CC.QTT A2A4M0_MOUSE/24-68 CCRPS.CCVSSC..CRPQCC.QS..VC...CQPTCC..H.PSCCIS.SC....RV..SS..CC.CPS D3ZJ72_RAT/72-115 CCDTA.CCDSKC..CKPTCV..S..IC...CSTPCC..Q.PSCCVP.SC....CV..PS..CC.QPS D3Z5T3_MOUSE/78-123 CCTPS.CCQQSS..CQPACC.TC..SP...CQPSCC..V.TLCCKP.VC....CT..PI.CCC.VPV D2HJK5_AILME/29-73 SCQTT.CYVPSS..CQTTCY.VP..SS...CQVSCC..V.PSSCQA.SC....SM..PV..IC.RPA KR121_MOUSE/19-63 SCQPS.CCVSSP..CQASCF.VS..SP...CQPSCC..V.SSSCQS.AC....CR..PA..IC.IPV KR106_HUMAN/265-311 PCQHA.CCVPVCSGASTSCC.QQ..SS...CQPACC..T.ASCCRP.SS....SV..SL..LC.HPV D3ZDD4_RAT/137-184 CCVPV.CCRPVC..CTPICS.ASSSSC...CQPSCC..APPVCCKP.CS....SL..SL..LC.RPV D4A8T7_RAT/139-184 CGVTL.CCRPVC..CTPICSGSP..SC...CAPVCC..K.PVCCKP.CS....SL..SL..LC.RPV Q08EG8_MOUSE/27-71 CCEPC.CCAPSC..CQPSCC.QP..SC...CVPSCC..A.PSCCVP.SC....CQ..PS..CC.APA D3ZGU7_RAT/27-65 CCEPC.GCAPSC..CQTSCCCQA..SC...CAPSCC..A.PT......P....CL......LC.TPV D4A2F4_RAT/27-71 CCEPC.GCVPSC..CQPSCC.VP..CC...CQSSCC..A.PSCCAP.AP....CL..TL..IC.TPV D3ZDU4_RAT/27-71 CCEPC.SCAPSC..CQPSCC.AP..C....CAPSCC..V.PSCCHC.SA....PT..PC.LLC.TPV D4A3Q1_RAT/42-85 CCEPC.GCAPSC..CQPSCC.VP..C....CAPSCC..V.PSCCQA.SC....CA..PS..CC.TPT B9EIL2_HUMAN/41-85 CCEPP.CCAPSC..CAPAPC.LS..LV...CTPVSR..V.SSPCCP.VT....CE..PS..PC.QSG KR121_HUMAN/24-68 CYIPV.GCQSSV..CVPVSF.KP..AV...CVPVRC..Q.SSVCVP.VS....CR..PV..VY.AAP A0JN45_BOVIN/96-140 CCISS.PCQQDC..CEPVCC.RP..VC...CKPVCR..T.PVCCTP.VC....CR..PV..CC.TPV KR108_BOVIN/111-155 CCRPV.CCRPVC..CTPVCC.RP..VC...CRPVCC..R.PVCCRP.VC....CT..PV..CC.RPM A8QW00_BOVIN/128-172 PCQQA.CCEPVC..CTPVCC.RP..VC...CTPVCC..R.PVCCTP.VC....CT..PV..CC.RPV D4A8P6_RAT/91-136 SCQPA.CCTSSP..CQPSCC.AP..VC...CKPVCC..KPPSCCVP.VC....CR..PV..CC.TPI KR103_HUMAN/84-128 SCQPA.CCTSSP..CQQACC.VP..VC...CKPVCC..V.PVCCKP.VC....CK..PI..CC.VPV Q148I6_BOVIN/91-135 SCQSA.CCTSSP..CQQACC.EP..VC...CRPVSC..T.PVCCTP.VY....CR..PV..CC.ESS KR10D_HUMAN/193-237 LCKSS.CCQPVV..CEPSCC.SA..VC...TLPSSC..Q.PVVCEP.SC....CQ..PV..CP.TPT D2HIQ2_AILME/193-237 TCKPS.CCQSVI..CEPSCC.SA..VC...TVPTSC..Q.PVVCEP.TC....GQ..PV..CP.TPS KR105_HUMAN/60-102 PCQSG.CT..SS..CTPSCC.QP..AC...CASSPC..Q.QACCVP.VC....CK..PV..CC.LPT A0JN45_BOVIN/141-186 CCEASLCSTSSC..CQQSSC.QP..PC...CTSSPC..Q.QACCEP.IC....CT..PV..CC.RPV D4A2F4_RAT/73-117 CVSSP.CCTPSC..CQQSSC.QP..AC...CTCSPC..Q.QSCGVT.LC....CK..PV..CC.VPV KR101_HUMAN/71-113 CTS...SCTPSC..CQQSSC.QP..AC...CTSSPC..Q.QACCVP.VC....CK..PV..CC.LPT D3ZUG4_RAT/130-173 CCKPV.CCTP.I..CSESCC.QQ..SS...CQSSCC..Q.PSCCVP.VC....CR..PV..CC.TPI D3ZNY7_RAT/180-226 CCQPS.CCVTLC..CRPVCC.TP..ICS.ASSSSCC..Q.PSCCAP.VC....CK..PV..SC.KPC A6QQG8_BOVIN/120-162 CCKPT.CV.TTC..CQPNCG.RS..SC...CQP.CC..R.PIRCQT.TC....CR..TT..CL.KPI D3ZD90_RAT/24-64 CWRPS.CV.TSC..CQP.CC.QP..SC...CGSSCC..Q.P.CCQT.TC....CR..T...CF.QPS KRA98_HUMAN/18-60 CWKPT.TV.TTC..SSTPCC.QP..SC...CVSSCC..Q.P.CCRP.TC....CQ..NT..CC.QPI B1AQ90_MOUSE/24-68 CCQTT.CCRTTC..CRPSCC.VS..SC...CRPQCC..Q.SVCCQP.TC....CR..PS..CC.RPS B1AQA9_MOUSE/24-68 CCQTT.CCRTTC..CRPSCC.VS..SC...CRPSCC..V.SSCCRP.QC....CQ..SV..CC.QPT KRA45_HUMAN/25-69 CCQTT.CCRTTC..CRPSCC.KP..QC...CQSVCY..Q.PTCCHP.SC....CI..SS..CC.RPY D3YXB6_MOUSE/83-125 CCRPV.CCQTT...CRPSCG.VS..SC...CRPVCC..Q.TTC.RP.SC....GV..SS..CC.RPV KR10D_HUMAN/128-172 CCQPV.CFEATV..CEPSCS.VS..SC...AQPVCC..E.PAICEP.SC....SV..SS..CC.QPV KR10D_MOUSE/88-132 CAQPV.CCEATI..CEPSCS.MG..SC...CQPVCC..E.ATICEP.SC....SV..ST..CA.QPV KR10D_HUMAN/68-112 CAQPL.CCDPVI..CEPSCS.VS..SG...CQPVCC..E.ATTCEP.SC....SV..SN..CY.QPV #=GC seq_cons CCpPs.CCpsoC..CpsoCC.pP..oC...CpsoCC..p.soCCpP.sC....Cp..ss..CC.pPs //