HMMER3/b [3.0 | March 2010] NAME MRF_C1 ACC PF13887.1 DESC Myelin gene regulatory factor -C-terminal domain 1 LENG 36 ALPH amino RF no CS no MAP yes DATE Fri Oct 5 01:15:55 2012 NSEQ 31 EFFN 2.781372 CKSUM 3168722975 GA 24.10 24.10; TC 24.10 26.90; NC 24.00 23.90; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.1213 0.71964 STATS LOCAL VITERBI -7.6172 0.71964 STATS LOCAL FORWARD -4.9261 0.71964 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.75690 3.50555 2.75876 2.25612 3.62517 3.36576 4.31327 2.68175 2.67124 2.05575 3.61919 2.96870 4.40585 3.37538 2.77439 3.25050 2.81344 2.44726 5.21170 3.88876 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.00000 * 1 4.48497 5.70278 5.78017 5.50829 3.85382 5.24441 5.90446 3.16585 5.30793 0.21814 3.71129 5.72453 5.57163 5.40419 5.28770 5.10326 4.75759 3.43656 5.97173 4.90077 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 2 2.92088 4.38639 4.39896 3.81374 3.46498 4.03461 4.34542 2.70583 3.68394 1.84708 2.78213 4.02110 4.39786 3.09813 3.86125 3.32549 1.80877 1.60332 5.01415 3.82836 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 3 3.41425 4.75722 5.31230 4.84614 4.14720 4.70147 5.45774 1.88273 4.72644 2.79012 3.98269 4.93770 5.11234 4.98664 4.87944 3.27881 3.70969 0.55387 5.99460 4.76879 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 4 3.38201 5.89019 1.69926 2.62912 5.15434 3.72318 4.24923 4.72650 3.23832 3.31084 5.08842 0.86845 4.33130 3.41655 3.81084 3.28869 3.67400 4.30235 6.36738 4.86551 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 5 3.12701 5.66946 2.46717 1.55242 5.00754 3.68940 3.99720 4.50000 1.21300 3.95914 4.73239 3.14591 4.17662 2.77901 3.25055 3.05536 3.37058 4.06054 6.07921 4.64946 5 - - 2.68634 4.41964 2.77536 2.73037 3.46370 2.40529 3.72511 3.29370 2.67757 2.69371 4.24706 2.90363 2.73756 3.18163 2.89817 2.37903 2.77483 2.98469 4.58493 3.61520 0.10950 2.30274 5.59059 1.38711 0.28741 0.48576 0.95510 6 3.30861 5.91321 1.34214 1.72163 5.24065 2.78698 4.16544 4.76773 3.11732 4.23203 5.03628 3.14802 4.26998 3.30914 3.70029 1.63112 3.58423 4.30987 6.37408 4.87249 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 7 3.90161 5.87954 4.41489 3.62769 5.45059 4.37019 4.19896 4.80352 2.32229 4.12565 5.04824 3.93455 4.72835 2.50124 0.49703 3.88495 4.01996 4.50357 6.04984 4.97656 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 8 3.75462 4.93730 5.87523 5.44419 4.34776 5.42134 6.29758 0.72791 5.40757 2.72513 4.05512 5.60945 5.63457 5.68629 5.59289 4.88941 4.02249 1.11866 6.55620 5.31951 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 9 4.39534 5.51146 5.63108 5.38326 0.68731 5.19452 4.15559 3.77431 5.17372 1.75435 4.31409 4.89272 5.44292 4.96115 5.05088 4.57362 4.60132 3.80936 4.24977 1.86913 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 10 3.82551 5.17690 5.09646 4.68823 2.88204 4.75071 4.36504 3.33902 4.42608 2.65311 1.00189 4.64945 5.09214 4.59201 4.50306 4.13772 4.06866 3.33458 4.58803 1.27649 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 11 4.30659 6.28718 3.46705 0.19520 5.84860 4.30165 5.11309 5.58083 4.18171 5.04259 6.09014 4.05835 4.97532 4.38173 4.62388 4.23970 4.65243 5.18909 6.77095 5.68501 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 12 3.02168 5.05841 3.45878 3.30016 5.02425 3.63516 4.62617 4.49123 3.53435 4.15000 4.99596 0.96180 4.34437 3.84954 3.91044 3.13483 1.33398 3.96834 6.30608 4.99834 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 13 3.74290 4.93091 5.85485 5.42450 4.35552 5.39433 6.27301 1.40257 5.38386 2.74356 4.06687 5.58602 5.61976 5.66891 5.57106 4.86100 4.01257 0.57326 6.55064 5.30702 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 14 2.49202 4.53651 4.18088 3.65283 3.71552 1.28767 4.39812 2.97707 3.55481 1.74174 2.86496 3.91222 4.35956 3.83298 3.81048 3.21824 3.20425 2.79113 5.25504 4.05650 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 15 0.21944 5.02864 4.81472 4.76231 5.38505 3.81259 5.60274 4.71671 4.81424 4.52502 5.49336 4.56077 4.63823 5.05213 4.90950 3.40110 3.74537 4.14836 6.66179 5.64780 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 16 2.46780 4.63419 4.82168 4.40355 4.23152 3.96234 5.06806 2.68589 4.29990 3.07467 4.13159 4.39376 4.59922 4.54181 4.47504 3.39165 1.58041 0.90327 5.86447 4.67664 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 17 3.32726 5.61140 3.58337 3.00797 5.07667 3.97178 4.00561 4.45657 1.00431 3.88220 4.70583 3.47107 4.36053 1.65006 2.64904 3.29778 2.80938 4.08500 5.93307 4.69469 22 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 18 3.51826 6.04368 2.77483 0.64199 5.36390 3.80307 4.28551 4.90224 3.14004 4.35222 5.21569 3.27593 4.40617 2.14434 3.60765 3.40540 3.79446 4.47659 6.45136 5.00311 23 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 19 4.48497 5.70278 5.78017 5.50829 3.85382 5.24441 5.90446 3.16585 5.30793 0.21814 3.71129 5.72453 5.57163 5.40419 5.28770 5.10326 4.75759 3.43656 5.97173 4.90077 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 20 4.18860 0.11276 5.68792 5.67965 5.65637 4.50818 6.15754 5.14886 5.59878 4.91439 6.08746 5.50618 5.25383 5.89625 5.51840 4.45306 4.72637 4.77869 6.69511 5.90621 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 21 3.95489 5.94560 4.67570 3.66013 5.63147 4.43319 4.13369 4.84799 0.80976 4.13434 5.04225 3.93988 4.73410 3.25838 1.16329 3.91863 4.02509 4.55208 6.04281 5.01900 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 22 3.94157 5.17147 5.86468 5.29659 3.56857 5.32749 5.67645 2.54646 5.15531 0.67693 2.57887 5.47702 5.41524 5.09752 5.14137 4.71403 4.15729 1.58216 5.75464 4.76655 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 23 1.82322 4.68632 4.57139 4.37559 5.07698 3.51391 5.22766 4.29721 4.34653 4.15048 5.02164 4.18421 4.33633 4.58996 4.51765 3.00497 0.53300 3.73035 6.47481 5.34673 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 24 3.02739 3.27629 1.59520 2.76779 4.88873 1.31259 4.18409 4.36001 3.07108 3.91412 4.71243 2.58481 4.20240 3.33720 3.57496 3.03905 3.35124 3.91038 6.09699 4.70891 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 25 3.38827 5.94873 1.42252 2.60781 5.35911 3.69940 4.27228 4.90580 3.29004 4.37721 5.20692 1.23062 4.32768 3.43255 3.89578 1.96760 3.69455 4.42847 6.52002 5.00042 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 26 4.48497 5.70278 5.78017 5.50829 3.85382 5.24441 5.90446 3.16585 5.30793 0.21814 3.71129 5.72453 5.57163 5.40419 5.28770 5.10326 4.75759 3.43656 5.97173 4.90077 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 27 3.61892 6.36312 1.33921 0.83955 5.63932 3.03832 4.36731 5.22324 3.50270 4.65897 5.54141 3.18140 4.41341 3.54352 4.19288 3.44991 3.92848 4.74028 6.80008 5.19954 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 28 2.89646 5.35090 3.04643 2.26389 4.67438 3.63266 3.13381 4.14427 2.59619 3.64542 4.40511 2.66676 4.04732 2.00472 3.07726 2.73972 1.56600 3.73175 5.79497 4.39740 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 29 3.97132 5.95112 4.70884 3.67817 5.64210 4.44352 4.13773 4.85470 1.11185 4.13904 5.04952 3.95179 4.74310 3.26288 0.84128 3.93553 4.03821 4.56132 6.04517 5.02619 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 30 3.96426 5.22282 5.61694 5.34215 4.29052 5.07073 5.99645 0.33072 5.21867 2.75954 4.15763 5.48536 5.49428 5.51580 5.32259 4.76504 4.27438 2.36031 6.30378 5.09453 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 31 3.73863 6.51778 0.76070 1.28050 5.77494 3.76828 4.44730 5.39002 3.65263 4.81697 5.74326 3.21244 4.47104 3.63689 4.38702 3.54688 4.06234 4.90045 6.94157 5.31625 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 32 2.60228 5.59090 1.85966 1.34289 4.91738 3.64497 2.62527 4.41716 2.77159 3.88854 4.64910 2.83367 4.12143 2.91938 3.29524 2.81488 3.28716 3.97395 6.02222 4.57823 37 - - 2.68623 4.42230 2.77524 2.73128 3.46359 2.40517 3.72499 3.29359 2.67675 2.69360 4.24694 2.90351 2.73744 3.18151 2.89805 2.37891 2.77524 2.98523 4.58482 3.61508 0.15621 1.95979 5.59059 0.18980 1.75520 0.48576 0.95510 33 3.22641 4.69675 4.58032 3.99952 3.66894 4.32746 4.62104 2.65675 2.37221 1.02379 3.57065 4.25793 4.67068 4.06616 3.86056 3.64637 3.46074 1.69259 5.35418 4.18303 39 - - 2.68576 4.42246 2.77541 2.73079 3.46375 2.40534 3.72516 3.29260 2.67762 2.69376 4.24711 2.90368 2.73761 3.18168 2.89822 2.37862 2.77541 2.98455 4.58498 3.61524 0.13869 2.07333 5.59059 1.42622 0.27472 0.48576 0.95510 34 2.14489 5.55386 2.96777 1.04280 4.92118 3.70784 4.00725 4.38158 2.05140 3.87548 4.66322 3.19516 4.18790 3.13253 3.18875 3.06118 3.35634 3.96678 6.01257 4.61815 45 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 35 3.10448 5.38257 3.46727 2.08030 4.72998 3.84850 3.92104 3.04106 2.17059 3.34008 4.44317 3.34501 4.22130 3.04432 1.14364 3.09713 3.30838 3.77445 5.76474 4.47861 46 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01149 4.86825 5.59059 0.61958 0.77255 0.48576 0.95510 36 2.06480 4.33756 4.83300 4.22625 3.36309 4.13104 4.46016 1.82278 4.03446 1.69078 2.50985 4.26294 4.47993 4.17125 4.07270 3.44194 3.19006 2.40042 2.45345 3.78945 47 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00775 4.86451 * 0.61958 0.77255 0.00000 * //