# STOCKHOLM 1.0 #=GF ID RRM_5 #=GF AC PF13893.1 #=GF DE RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) #=GF AU Coggill P #=GF SE JCSG:Target_421317_RF20609A #=GF GA 22.00 22.00; #=GF TC 22.00 22.00; #=GF NC 21.90 21.90; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF RN [1] #=GF RM 8290338 #=GF RT Analysis of the RNA-recognition motif and RS and RGG domains: #=GF RT conservation in metazoan pre-mRNA splicing factors. #=GF RA Birney E., Kumar S., Krainer A.R. #=GF RL Nucleic Acid Res 1993;21:5803-5816. #=GF CC The RRM motif is probably diagnostic of an RNA binding protein. #=GF CC RRMs are found in a variety of RNA binding proteins, including #=GF CC various hnRNP proteins, proteins implicated in regulation of #=GF CC alternative splicing, and protein components of snRNPs. The #=GF CC motif also appears in a few single stranded DNA binding #=GF CC proteins. #=GF SQ 106 #=GS A6R9C1_AJECN/311-369 AC A6R9C1.1 #=GS B9H058_POPTR/34-92 AC B9H058.1 #=GS B5DZX4_DROPS/56-110 AC B5DZX4.1 #=GS C3YSJ5_BRAFL/291-351 AC C3YSJ5.1 #=GS RBM48_DANRE/67-127 AC A4FVJ7.1 #=GS B0JZV0_XENTR/58-118 AC B0JZV0.1 #=GS A0PJB1_HUMAN/62-122 AC A0PJB1.1 #=GS B9HPX6_POPTR/42-102 AC B9HPX6.1 #=GS A9RL27_PHYPA/41-101 AC A9RL27.1 #=GS Q4DY41_TRYCC/275-330 AC Q4DY41.1 #=GS A4HK66_LEIBR/474-530 AC A4HK66.2 #=GS Q6R607_TRYCR/281-337 AC Q6R607.1 #=GS A0CTN0_PARTE/278-332 AC A0CTN0.1 #=GS A9UY72_MONBE/277-331 AC A9UY72.1 #=GS A0AUP8_DANRE/349-403 AC A0AUP8.1 #=GS D4A8L2_RAT/693-749 AC D4A8L2.1 #=GS D4A8L2_RAT/918-973 AC D4A8L2.1 #=GS A8DZ58_DANRE/153-209 AC A8DZ58.1 #=GS Q800H4_DANRE/768-824 AC Q800H4.2 #=GS Q800H4_DANRE/603-662 AC Q800H4.2 #=GS Q5R497_PONAB/513-569 AC Q5R497.1 #=GS Q6DFS8_XENTR/456-512 AC Q6DFS8.1 #=GS Q5R497_PONAB/415-471 AC Q5R497.1 #=GS Q4T9M2_TETNG/18-72 AC Q4T9M2.1 #=GS Q5BW77_SCHJA/59-117 AC Q5BW77.2 #=GS Q5BVI9_SCHJA/72-128 AC Q5BVI9.2 #=GS D2GX43_AILME/27-83 AC D2GX43.1 #=GS PTBP3_HUMAN/75-131 AC O95758.2 #=GS Q59G43_HUMAN/97-153 AC Q59G43.1 #=GS A7SAW4_NEMVE/321-376 AC A7SAW4.1 #=GS A7SLA0_NEMVE/17-72 AC A7SLA0.1 #=GS C3Z3S9_BRAFL/331-386 AC C3Z3S9.1 #=GS A8PEJ9_BRUMA/175-230 AC A8PEJ9.1 #=GS Q4RZ23_TETNG/324-379 AC Q4RZ23.1 #=GS Q28YG1_DROPS/152-208 AC Q28YG1.2 #=GS Q3L1C8_APLCA/46-101 AC Q3L1C8.1 #=GS Q5DCY5_SCHJA/120-175 AC Q5DCY5.1 #=GS Q54NR9_DICDI/63-115 AC Q54NR9.1 #=GS C4Y2H4_CLAL4/92-151 AC C4Y2H4.1 #=GS Q5CN61_CRYHO/86-145 AC Q5CN61.1 #=GS Q9U929_9TRYP/33-85 AC Q9U929.1 #=GS Q4DDU0_TRYCC/55-107 AC Q4DDU0.1 #=GS A2EB91_TRIVA/108-157 AC A2EB91.1 #=GS B9G956_ORYSJ/184-240 AC B9G956.1 #=GS D2V070_NAEGR/329-386 AC D2V070.1 #=GS B4PE28_DROYA/440-497 AC B4PE28.1 #=GS Q16NU6_AEDAE/123-179 AC Q16NU6.1 #=GS B6AFX6_CRYMR/321-382 AC B6AFX6.1 #=GS Q4DFB7_TRYCC/38-99 AC Q4DFB7.1 #=GS Q5BYU8_SCHJA/68-123 AC Q5BYU8.2 #=GS Q4RZ23_TETNG/54-110 AC Q4RZ23.1 #=GS A7SAW4_NEMVE/64-121 AC A7SAW4.1 #=GS A7SLA1_NEMVE/23-79 AC A7SLA1.1 #=GS B3P5I1_DROER/70-126 AC B3P5I1.1 #=GS A2EGP7_TRIVA/21-80 AC A2EGP7.1 #=GS D3Z816_RAT/80-135 AC D3Z816.1 #=GS A2G332_TRIVA/35-88 AC A2G332.1 #=GS D3BCG9_POLPA/110-164 AC D3BCG9.1 #=GS C6HE17_AJECH/121-174 AC C6HE17.1 #=GS C9S7I2_VERA1/297-350 AC C9S7I2.1 #=GS Q5K9T5_CRYNJ/260-313 AC Q5K9T5.1 #=GS A8QAU3_MALGO/311-364 AC A8QAU3.1 #=GS C3YS17_BRAFL/570-625 AC C3YS17.1 #=GS RBM27_HUMAN/617-672 AC Q9P2N5.2 #=GS B3RXN0_TRIAD/475-530 AC B3RXN0.1 #=GS B4M8J9_DROVI/605-660 AC B4M8J9.1 #=GS A7S3I5_NEMVE/515-570 AC A7S3I5.1 #=GS A2F8I9_TRIVA/120-173 AC A2F8I9.1 #=GS A2GBD0_TRIVA/156-209 AC A2GBD0.1 #=GS A2F769_TRIVA/252-305 AC A2F769.1 #=GS B3S3K6_TRIAD/199-259 AC B3S3K6.1 #=GS SLT11_YARLI/239-296 AC Q6C3L4.1 #=GS A9UXM9_MONBE/2113-2165 AC A9UXM9.1 #=GS Q5RB61_PONAB/618-670 AC Q5RB61.1 #=GS Q4KML1_DANRE/289-341 AC Q4KML1.1 #=GS B7P593_IXOSC/866-916 AC B7P593.1 #=GS B3RXN0_TRIAD/767-818 AC B3RXN0.1 #=GS B5VSZ0_YEAS6/315-369 AC B5VSZ0.1 #=GS B9Q1F7_TOXGO/190-246 AC B9Q1F7.1 #=GS Q8VD67_MOUSE/80-134 AC Q8VD67.1 #=GS Q4S9I4_TETNG/1679-1733 AC Q4S9I4.1 #=GS A8P915_BRUMA/467-526 AC A8P915.1 #=GS B9VTR6_BOMMO/46-105 AC B9VTR6.1 #=GS Q4S0T2_TETNG/221-280 AC Q4S0T2.1 #=GS Q5BVI9_SCHJA/186-244 AC Q5BVI9.2 #=GS A7SAW4_NEMVE/158-221 AC A7SAW4.1 #=GS Q4RZ23_TETNG/147-207 AC Q4RZ23.1 #=GS A0E9X1_PARTE/27-85 AC A0E9X1.1 #=GS A0CD05_PARTE/32-88 AC A0CD05.1 #=GS A0CTN0_PARTE/24-81 AC A0CTN0.1 #=GS A2EGK8_TRIVA/264-319 AC A2EGK8.1 #=GS A2EGK8_TRIVA/124-181 AC A2EGK8.1 #=GS A2E0T3_TRIVA/122-179 AC A2E0T3.1 #=GS A2EYF8_TRIVA/135-187 AC A2EYF8.1 #=GS B9NEW0_POPTR/108-167 AC B9NEW0.1 #=GS B9NCG5_POPTR/70-129 AC B9NCG5.1 #=GS C4YB29_CLAL4/37-97 AC C4YB29.1 #=GS Q6CPV4_KLULA/22-80 AC Q6CPV4.1 #=GS A7TR00_VANPO/24-80 AC A7TR00.1 #=GS Q74Z10_ASHGO/23-79 AC Q74Z10.2 #=GS C5DJW8_LACTC/23-79 AC C5DJW8.1 #=GS B9SAB6_RICCO/30-89 AC B9SAB6.1 #=GS A4HE44_LEIBR/108-162 AC A4HE44.1 #=GS C9ZJX0_TRYB9/104-158 AC C9ZJX0.1 #=GS B7FUQ4_PHATC/662-714 AC B7FUQ4.1 #=GS A8NYF1_BRUMA/184-244 AC A8NYF1.1 A6R9C1_AJECN/311-369 F.KDLLETF.G.D.I..KA.FHG.LPSTQ...GNV..DEFLIE...F...F.DTRAADNVVS..TL..N.GTS...V...DE..C..V.LELK...LH B9H058_POPTR/34-92 I.ASVFNTF.G.E.V..KG.IYA.ADES......G..TRVIVS...Y...S.EANSAQQALT..AL..N.GKSCADL...GG..R..S.LHIR...YS B5DZX4_DROPS/56-110 L.KTKLQCF.G.K.L..QS.LEL.EAF.......T..DVFAVQ...F...E.RLEVARRAKR..QL..D.AKQ...F...YG..G..T.LHIS...YA C3YSJ5_BRAFL/291-351 L.VKRFALY.G.A.V..QE.YRI.LHEYPA.EEFT..QAYWIK...F...D.RLQAARVAKR..KL..D.EYS...F...FG..G..V.LHVS...YA RBM48_DANRE/67-127 L.VQLFALY.G.V.I..EE.YRP.LDEYPA.EQFT..EVYLIQ...F...Q.KLTSARAAKR..HT..D.EKS...F...FG..G..Q.LHVC...YA B0JZV0_XENTR/58-118 L.IEQFALY.G.T.I..EE.YNA.LDEYPA.EEFT..EVYLIK...F...Q.RIQSARVAKR..KL..D.ERS...F...FG..S..M.LHVC...YA A0PJB1_HUMAN/62-122 L.VERFALY.G.A.I..EQ.YNA.LDEYPA.EDFT..EVYLIK...F...M.NLQSARTAKR..KM..D.EQS...F...FG..G..L.LHVC...YA B9HPX6_POPTR/42-102 L.FKLFASY.G.D.V..EE.CKP.MDAEDC.EQFT..DVYWIK...F...R.LVSNARFAKR..KL..D.ESI...F...LG..N..P.LQVS...YA A9RL27_PHYPA/41-101 L.VKLFALY.G.P.I..EE.HRL.MDEEEC.EEFT..DVYWLK...F...S.SIANARFAKR..KL..D.DYP...F...LG..Q..L.LQVT...YA Q4DY41_TRYCC/275-330 I.FTLLETF.G.G.V..VT.IRR.NHNK......K..DILTVK...M...A.SIPEADNVVQ..HV..R.KVP...F...AG..G..T.VSAK...RF A4HK66_LEIBR/474-530 L.WVLLEVF.G.N.V..NS.LKR.QFRE......R..TNVVAQ...F...Q.HPGDTLTAIQ..YL..Q.HCP...F...RG..G..V.LRLK..RFS Q6R607_TRYCR/281-337 L.WVLLEVY.G.N.V..NS.LKR.QFSS......K..SNVVAH...F...Q.NVYDARLAVQ..YL..Q.GCP...F...HG..A..T.LLLK..HFA A0CTN0_PARTE/278-332 L.YNLFSIY.G.N.I..DK.MVY.QKDK.........STLLVE...Y...H.LQKCADQCME..KL..N.NVV...F...QG..Q..T.LQIT...YS A9UY72_MONBE/277-331 A.VALACVY.G.N.V..DK.CVM.VPSS.........RTILIQ...F...Q.DEAGQQAFSQ..HV..S.KLQ...L...LG..S..Q.LNVT...TS A0AUP8_DANRE/349-403 V.LELAAMF.G.E.V..WQ.SKF.LD...........GKALIE...M...V.DWRDADIMVK..YYYSN.PLK...I...QG..K..S.IKVT...MS D4A8L2_RAT/693-749 I.RKAFQPF.G.K.I..SD.VLL.VPCR.........NEAYLE...M...E.FKKAVTSIMK..YI..E.TMP...LV.IKG..K..S.VKVC...VP D4A8L2_RAT/918-973 I.YNLAKPF.G.A.L..KD.ILV.LSSH.........KKAYIE...I.....NKKSADSMVK..FY..T.CFP...IC.MDG..N..Q.LSIS...MA A8DZ58_DANRE/153-209 L.LKLAEPY.G.K.I..RR.YYL.NR.M......R..NECFIE...M...E.RGEDAEQMAEAYKL..N.RPK...F...VG..K..R.LLIY...VS Q800H4_DANRE/768-824 F.LNIAKPY.G.T.V..IR.HWM.FRLH.........RTGLIE...M...E.TASDAEKVLS..AA..K.MKK...IT.VAG..K..H.PKIA...VS Q800H4_DANRE/603-662 L.LKIGEKY.G.D.V..AG.CCL.VRSN......RKVEKALIE...M...V.NADDAAKLEA..DC..K.KQHI.KL...GG..K..I.LRIK...VS Q5R497_PONAB/513-569 V.LKLAEPY.G.K.I..KN.YIL.MRMK.........SQAFIE...M...E.TREDAMAMVD..HC..L.KKAL.WF...QG..R..C.VKVD...LS Q6DFS8_XENTR/456-512 V.IKLAEAY.G.K.V..KT.YIL.MRKK.........NQAFIE...M...E.NKEDVQTMID..MC..E.KNPL.WF...QG..K..H.LKVD...LS Q5R497_PONAB/415-471 L.LQLVEPF.G.V.I..SN.HLI.LNKI.........NEAFIE...M...A.TTEDAQAAVD..YY..T.TTPA.LV...FG..K..P.VRVH...LS Q4T9M2_TETNG/18-72 L.FAFTEPF.G.V.L..RE.HLV.LKNK...........AFLE...M...S.SHEEAVDMVN..YH..K.ENPA.FL...YG..K..P.ISFY...LS Q5BW77_SCHJA/59-117 V.AMLAIPF.G.S.I..AN.MIL.TRKS.........CQALVE...M...D.TLESAESMFG..YY..M.TVCTPNL...RG..K.YP.IEMQ...FS Q5BVI9_SCHJA/72-128 I.ALLGIPF.G.L.L..EN.MVL.SKKA.........NQALLE...M...Q.CLESAIMMVS..YY..R.EYQV.TL...RG..R..T.LVMQ...YS D2GX43_AILME/27-83 V.INLGLPF.G.K.V..TN.YIL.MKST.........NQAFLE...M...A.YTEAAQAMVQ..YY..Q.EKSA.VI...NG..E..K.LLIR...MS PTBP3_HUMAN/75-131 I.ISLGLPF.G.K.V..TN.LLM.LKGK.........SQAFLE...M...A.SEEAAVTMVN..YY..T.PITP.HL...RS..Q..P.VYIQ...YS Q59G43_HUMAN/97-153 V.IALGLPF.G.K.V..TN.ILM.LKGK.........NQAFLE...L...A.TEEAAITMVN..YY..S.AVTP.HL...RN..Q..P.IYIQ...YS A7SAW4_NEMVE/321-376 L.FNLLCCY.G.N.V..IK.IKF.LLGK......P..GTAMAE...L...H.EHVACNTVME..NL..S.KMT...L...FD..Q..Q.LEFS...FS A7SLA0_NEMVE/17-72 I.FNLFCLY.G.N.V..IK.VKF.LTNK......P..GACMVQ...M...S.DKIASEMIIR..NL..S.GAT...I...FD..N..K.INIM...FS C3Z3S9_BRAFL/331-386 L.FNLLCLY.G.N.V..MK.IKF.MKSK......P..GSAMVQ...M...G.DPSAVERCIN..NL..S.TCV...L...FG..Q..Q.LALS...YS A8PEJ9_BRUMA/175-230 L.FNLLCLY.G.N.C..NK.IKF.MKSK......T..DTAMAQ...L...G.SVRQVYTTID..NL..H.GTM...I...FG..N..K.LALR...PS Q4RZ23_TETNG/324-379 I.FNIFCLY.G.N.V..ER.VKF.MKSK......P..GAAMVE...M...G.DCYAVDRAIT..HL..N.NTY...L...FG..Q..K.INVC...VS Q28YG1_DROPS/152-208 L.FNLVCLY.G.N.V..AR.IKF.LKTK......E..GTAMVQ...M...G.DSVAVERCVQ..HL..N.NIP...V..GTG..G..K.IQIA...FS Q3L1C8_APLCA/46-101 L.FNLFCLY.G.N.V..VR.IKF.LKSK......E..GSAMIQ...L...G.DPISVERAIA..NL..N.NVF...F...FG..N..K.LQLS...MS Q5DCY5_SCHJA/120-175 L.FNLLCLY.G.N.V..AR.IKF.LKTR......P..GYALVQ...V...G.NPETGDLIHR..YF..N.GVC...V...FG..Q..V.IQFH...HS Q54NR9_DICDI/63-115 I.FNWLCQY.G.N.I..TS.IKV.GK...........EQTLVK...F...C.DGFNAYVAHQ..FA..N.NTF...A...FG..K..N.INIY...WT C4Y2H4_CLAL4/92-151 I.YTHAAQS.G.E.I..EQ.MVV.CENENF..HLC..GNVYVR...Y...S.DTQSADKAVA..QL..N.QEW...Y...GG..R..P.VYCE...LS Q5CN61_CRYHO/86-145 I.FKELSKY.G.E.I..LE.LLI.CDNIGD..HMI..GNVYIR...F...S.TEEYAKTALL..NL..R.GKL...Y...AG..K..P.INIE...LS Q9U929_9TRYP/33-85 L.WERLEQV.A.P.V..SD.VRI.R.........G..RCAFVD...V...A.GPEAADRLIT..EM..D.GKY...I...GE..A..R.MVVQ...HS Q4DDU0_TRYCC/55-107 L.RQRLEEV.A.P.V..LG.VRI.R.........G..RCAFAD...V...P.DPETAERLVA..EL..D.GKL...I...GD..A..R.MAVQ...IS A2EB91_TRIVA/108-157 L.YEELSLF.G.Q.V..FR.VKL.L.........R..GCAVAQ...F...Y.NEESMNRAL.......N.ARY...T...CN..G..K.ISKK...TS B9G956_ORYSJ/184-240 V.CNYFSMY.G.M.V..QD.VRI.PYQE.....KR..MFGFVT...F...A.YQKTVKLILA..KG..N.PHY...I...CD..A..R.VLVK...PY D2V070_NAEGR/329-386 I.KPEMEKY.G.K.I..EK.IKL.YPEN.....PD..GVVEIR...F...K.TLHAARTCIS..EN..H.GRL...F...DG..I..K.LIAY..IWD B4PE28_DROYA/440-497 L.REECSKC.G.M.V..RK.VVI.YDRH.....PE..GVAQIN...M...A.SPEEADVVIQ..MM..Q.GRY...F...GQ..R..Q.LTAE..SWD Q16NU6_AEDAE/123-179 L.REECNKC.G.I.C..RR.VVL.FDRH.....PE..GVAQIT...M...S.DPEEADLVVK..LM..N.GRF...F...GK..R..K.LTAE...IW B6AFX6_CRYMR/321-382 I.ALFLSPV.C.N.VPFKN.IIM.SYGSDN..RMS..GEAYVV...L...S.SKDDMKVCIS..QL..H.GNR...M...GK..R..W.IEVL...PS Q4DFB7_TRYCC/38-99 I.RELIEPF.A.K.I..RR.VTM.PTPVLWLSCPT..GRAEVV...G...D.TLEDTKLVYV..HL..H.GTV...I...DG..N..R.INVS...FA Q5BYU8_SCHJA/68-123 L.MHVFPK..G.D.I..D..FPL.TKDGI....SC..GYAIVK...F...V.NENVAAEAFS..TT..N.KRL...I...RG..L..P.IFVN...FI Q4RZ23_TETNG/54-110 L.CDALKEF.G.E.I..SY.VVL.MPKK.........RQALVE...Y...A.DMNGSFTAVT..YA..A.DNQV.YI...AG..H..P.AFIN...YS A7SAW4_NEMVE/64-121 L.MQCLSQY.G.N.I..SC.ITM.MPKI.........RQALVE...F...E.EIACANTLVN..QT..QMG.NPVIL...CG..R..P.AYAN...YS A7SLA1_NEMVE/23-79 L.IQVLQPF.G.T.I..TY.VTL.LPKI.........RQALVE...F...E.SLESAIAVVT..YS..Q.TSP...LT.VLG..R..Q.MFVN...YS B3P5I1_DROER/70-126 V.FSFFSSF.G.D.L..EK.VCV.RSGTD....NL..NYAMVL...F...C.RTCSMEQAIK...S..N.PHL...I...KG..H..R.LNCR...KA A2EGP7_TRIVA/21-80 V.YRYCAQFTG.E.I..IN.VNV.FPTND...GYN..NLANVT...L...H.SIVGASNLIN..AI..N.YRI...V...DG..K..P.IYAN...IC D3Z816_RAT/80-135 V.RRFLGRF.GLQ.S..HK.IKL.FGQP.........PCAFVT...F...R.SAAERDKALR..VL..H.GVL...W...KG..R..P.LSVR...LA A2G332_TRIVA/35-88 V.RSVFSAF.G.D.I..LQ.IRK.ESD..........KIYVVK...Y...Y.DLRSPVKAIE..CK..D.PII...L...GG..E..P.CKVE...LK D3BCG9_POLPA/110-164 I.KAIFTTT.A.DAI..IN.VK...NDI......V..NTWFIT...F...D.TEENASKAYD..FL..Q.NAT...Y...KD..K..P.IKVR...IK C6HE17_AJECH/121-174 V.REFFSEF.G.N.I..VE.VTM.QPYK.........HLALVK...Y...D.SWAAARRAWA...S..P.KVI...F...DN..R..F.VKVY...WY C9S7I2_VERA1/297-350 V.RDAFSEF.G.T.I..VD.VTL.QLYH.........RLAIVK...Y...D.TWHAANTAYR..ST....KAF...F...DN..R..F.VKVF...WY Q5K9T5_CRYNJ/260-313 I.RNYFQQF.G.T.I..TS.VAL.E.GR......G..NRALVS...F...A.SNLEAYKAWK...S..D.EAV...F...GN..R..R.VKVL...WH A8QAU3_MALGO/311-364 V.NDYFKRF.G.T.I..TN.IEV.DKPN.........KKALVT...Y...A.TPAEADQAHK..S...P.DVI...F...GN..R..F.VKVY...FQ C3YS17_BRAFL/570-625 L.SGYFERF.G.T.V..SN.VQV.CFDG.....DP..ESALVT...F...S.SNAEARAAH...QC..T.DAV...L...NN..R..F.IRVF...WH RBM27_HUMAN/617-672 L.NEHFSKF.G.T.I..VN.IQV.AFKG.....DP..EAALIQ...Y...L.TNEEARKAIS...S..T.EAV...L...NN..R..F.IRVL...WH B3RXN0_TRIAD/475-530 L.NEHFGKF.G.N.I..MN.IQI.GVEG.....DK..QAALIQ...F...S.THAEAKSAHD...S..P.EAV...L...NN..R..F.IKVF...WK B4M8J9_DROVI/605-660 L.NNHFAKF.G.K.I..VN.IQV.SYEG.....DP..EAAIVT...F...S.THAEANVAYR..S...T.EAV...L...NN..R..F.IKVF...WH A7S3I5_NEMVE/515-570 L.NEYFKRF.G.N.I..VN.IQVNAFND......P..EAALVQ...F...S.NSLEARNAYR...C..P.DAV...L...GN..R..F.IRVF...WH A2F8I9_TRIVA/120-173 I.YKEFINF.G.E.I..VA.ITT.DIEN.........NYALVQ...F...K.TAESCFSAV...TS..Q.KKF...F...YN..D..F.IKVG...YA A2GBD0_TRIVA/156-209 I.YKVFKLF.G.R.I..CA.IEE.DKEN.........NVAFIE...Y...A.KLVDAYHAVK..KA..Q..KL...L...GN..K..C.LRVE...FA A2F769_TRIVA/252-305 I.FKTFSKF.G.R.I..AG.IEE.DHED.........GVCFIE...Y...S.KLAYAYRAIK......K.GAK...I...TG..N.SF.LRVD...WG B3S3K6_TRIAD/199-259 F.SDQLEKI.T.T.T..KF.DTK.FESAKY.PSFG..RIGLIT...F...E.SEEEAFKITQ..IL..S.NHK...I...ND..K..T.IDVQ...FI SLT11_YARLI/239-296 I.RKHFTET.G.G.T..IS.LLT.VVHR......A..HCGYVV...F...E.TRAAAEKAAA..AI..S.GGR...LV.LNG..C..R.LRVA...WG A9UXM9_MONBE/2113-2165 L.TPYFACF.G.N.F..VS.VVQ.SGDQ.........GRALVT...F...K.DRRSAETAKE......R.ARN...F...NG..R..A.LEIE...WF Q5RB61_PONAB/618-670 L.LPHFAQY.G.E.I..ED.CQI.DDSS.........LHAVIT...F...K.TRAEAEAAA....V..H.GAR...F...RG..Q..D.LKLA...WN Q4KML1_DANRE/289-341 L.LPHFAQY.G.E.I..ED.CQM..EDS......S..LSAIIT...Y...K.TRAEAEQAA....I..H.GVR...L...NN..Q..E.LRLA...WH B7P593_IXOSC/866-916 L.QAHFAQY.G.E.V..EG.VER.LNTG...........LVIT...F...K.TRKDAELGVS......R.GSE...F...KN..R..P.LQWA...WF B3RXN0_TRIAD/767-818 I.ITHFTQF.G.N.V..TG.VDV.GEND..........HVIVK...F...S.TRKEAEIAA....V..K.GVI...Y...KT..K..S.LVFS...WY B5VSZ0_YEAS6/315-369 L.RVDLEEY.G.E.I..DC.IKI.IKEK.........GIAFIH...F...A.SILNAIKVVT..NL..P.IRN...P...YY..Q..N.KRIF...YG B9Q1F7_TOXGO/190-246 L.SKEFGIW.G.D.V..TC.IRV.IPKK.........NIAFIT...Y...A.YRVQAEFAKV..AM..S.DQN...L...GK..QAPL.LLVK...WA Q8VD67_MOUSE/80-134 L.RTICMQH.G.P.L..LT.FHL.NLTQ.........GTALIR...Y...S.TKQEAAKAQT..AL..H.MCV...L...GN..T..T.ILAE...FA Q4S9I4_TETNG/1679-1733 L.KTLCMQH.G.P.L..IT.FHL.NLPH.........GNAVVC...Y...S.SKDEAAKAQK..SL..H.MCV...L...GN..T..T.ILAE...FA A8P915_BRUMA/467-526 L.QQLLSTF.G.T.V..VE.GGF.WIDN.....IK..STCIAK...Y...S.TVEEAVVARG..RL..H.NVVWPPC...SP..K..T.LKID...YS B9VTR6_BOMMO/46-105 L.KNLLQRT.G.R.I..EE.NGF.WIDK.....IK..SKCYVK...Y...E.TEDQAVETRH..AL..H.GVT...WPVSNP..K..T.LHVD...FS Q4S0T2_TETNG/221-280 L.KELLNRT.G.T.V..VE.EGF.WIDK.....IK..SHCFVT...Y...A.TTEEAAATRE..AL..H.RVK...WPQSNP..K..V.LHVD...FC Q5BVI9_SCHJA/186-244 L.HKIFYRY.G.K.I..LR.IVTYLKNN......Q..YHGLVE...F...G.NHIHAFVAML..HL..N.GQN...I...YT..GCCS.LRVQ...FS A7SAW4_NEMVE/158-221 L.HTIFSKQ.G.M.V..QR.IVI.FRKS......G..LQAMVEESRF...D.CVEAARHAKE..TL..N.GAD...I...YTGCN..T.LKIESQGYA Q4RZ23_TETNG/147-207 L.YTICNNC.G.P.V..QR.IVI.FRKN......G..VQAMVE...YPFID.SVQSAQRAKA..SL..N.GAD...I...YS..GCCT.LKIE...YA A0E9X1_PARTE/27-85 LFYRYFSNF.G.E.V..NK.ILI.FEKG......K.QWKCFIE...M...A.TLQQARFSQQ..QL..N.GCQ...L...YD..Q..TIMNVY...YS A0CD05_PARTE/32-88 F.FRTFSSF.G.Q.V..KK.ILI.FERK.....II..WKVFIE...Y...E.NAQQAQSAL...VL..D.GTL...F..DYQ..L..K.MRVH...LS A0CTN0_PARTE/24-81 I.YKHFSQY.G.Q.I..EK.ILI.FEKT......Q.IWKVFLE...T...K.NKETAQNLIK..QC..T.NNI...L..NQD..A..S.LRMQ...LY A2EGK8_TRIVA/264-319 L.HNLISQY.G.P.V..NK.IKV.FQNA......R.QKYAVVQ...M...V.NPFYARLVTA..HL..Q.NCP...Y...QN..G..R.L.IF...YH A2EGK8_TRIVA/124-181 I.YDECSNY.G.T.V..EK.IIC.FEKN......G..KFALVQ...M...H.DVKEAALALA..NL..S.NSSR.YL...PN..F..Q.IKIQ...YS A2E0T3_TRIVA/122-179 I.YDQCSLF.G.T.V..DK.IIC.FEKS......G..KFALVQ...M...H.TIQDAGLALY..NL..S.NCE...R...HN..PSFK.LRIQ...FS A2EYF8_TRIVA/135-187 L.YRLVAPH.G.F.V..RR.IS....TR......K..QFTFIE...F...D.TTKDAKDAFH..FL..K.SVE...Q...NY..H..G.LRVS...YA B9NEW0_POPTR/108-167 L.KKTFGKF.G.R.V..IK.LFL.SKRKTV..LGR..RFGFVE...I...L.SPLPVSDLCD..QA..S.NVW...F...DS..Y..K.LRVN...PA B9NCG5_POPTR/70-129 L.KDRFRKQ.G.K.V..IK.LFV.SRKTNQ..AGK..HFGFIT...I...L.SNLSDKTLLE..GL..N.DIW...F...DS..Y..K.LRVN...VA C4YB29_CLAL4/37-97 L.HARLEKY.G.T.I..TK.PIS.FHTKPL..NDF..YFAFVE...M...DMTAKALDKLKT..AF..N.GVL...F...MG..R..K.LTVA...TA Q6CPV4_KLULA/22-80 L.YARFLKF.G.K.V..VDESKS.FEQHD....AF..GYLNME...F...E.DASQFEKMKS..SF..N.RVK...F...KG..N..T.LRVA...EA A7TR00_VANPO/24-80 L.YKRFQKF.G.K.C..EQ.ESF.EK.H......S..NFAFLNM.SF...S.DDSSFSTLKQ..NY..N.KLK...F...KG..N..I.LRID...LA Q74Z10_ASHGO/23-79 L.YDRFAQF.G.R.C..IE.PHF.ECHP.....TF..AYLTME...F...D.DEQQYQKLKR..SF..N.NVM...Y...MG..N..M.LRVD...VA C5DJW8_LACTC/23-79 L.YHRFQRF.G.K.C..IS.TEF.ERYD.....HF..GYIDME...F...D.NEAAFLKLKQ..SF..N.GVK...F...KG..N..A.LKVD...IA B9SAB6_RICCO/30-89 L.CNLLSKV.G.IGF..QS.VDI.IRTK.....GR..SFAYID...FL.PS.SVSALPKLFN..TY..N.GCV...W...KG..G..R.LKLD...KA A4HE44_LEIBR/108-162 F.LSLFNRD.A.I.A..TH.RLI.NQDG......K..SFAFVE...F...V.SAQALTVAL...SL..D.QTF...Q...RG..R..R.MYVD...LA C9ZJX0_TRYB9/104-158 F.LRNFHED.V.V.V..TS.RLI.NQDG......K..SFAFVE...F...K.TPQALLIAL...AM..D.QSL...V...KG..R..K.LYVD...LA B7FUQ4_PHATC/662-714 I.IAMFAPY.V.K.V..DE.VVM.K.........G..NFSFVN...T...S.DPVNAERARE..AL..N.GTL...L...GG..M..P.VRIN...PA A8NYF1_BRUMA/184-244 L.MALTARQ.GFR.V..KD.IRI.IHKGP....DR..CFGFVE...F...G.DVNSAQAWME..YN..K.GTL...LL.DDG..R..P.VKLE...YS #=GC seq_cons l.hphhppa.G.p.l..pp.lth.hppp.........ptuhlp...a...s.shpsAppshp..th..s.ssh...h...ts..p..t.lplp...au //