# STOCKHOLM 1.0 #=GF ID GOLD_2 #=GF AC PF13897.1 #=GF DE Golgi-dynamics membrane-trafficking #=GF AU Coggill P #=GF SE Jackhmmer:Q6PL24 #=GF GA 27.00 27.00; #=GF TC 27.50 27.00; #=GF NC 26.80 26.90; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF RN [1] #=GF RM 12049664 #=GF RT The GOLD domain, a novel protein module involved in Golgi #=GF RT function and secretion. #=GF RA Anantharaman V, Aravind L; #=GF RL Genome Biol 2002;3:research0023. #=GF DR INTERPRO; IPR009038; #=GF CC Sec14-like Golgi-trafficking domain The GOLD domain is always #=GF CC found combined with lipid- or membrane-association domains [1]. #=GF SQ 11 #=GS C1BX34_ESOLU/132-267 AC C1BX34.1 #=GS TMED8_HUMAN/185-324 AC Q6PL24.1 #=GS Q3KQ03_XENLA/94-230 AC Q3KQ03.1 #=GS A3KP57_DANRE/365-493 AC A3KP57.1 #=GS Q5DEX4_SCHJA/356-485 AC Q5DEX4.1 #=GS D2A2W6_TRICA/302-444 AC D2A2W6.1 #=GS A7SAW2_NEMVE/29-160 AC A7SAW2.1 #=GS A4QNP1_XENTR/385-517 AC A4QNP1.1 #=GS A8QEB9_BRUMA/52-198 AC A8QEB9.1 #=GS Q2EEM2_CAEEL/183-337 AC Q2EEM2.1 #=GS C3ZQJ8_BRAFL/353-482 AC C3ZQJ8.1 C1BX34_ESOLU/132-267 VYRGDIMTVHVPTVPEGKRVCWEFATDNYDIGFGIYFDWTPVTCR.....AITVHISESSDDEDEEDEIE.....A..........PANTGDVEKGS.KAL...AN.....SNLGEILPVYRQDSHLAVQGGSHEYPGEGTYLLKFDNSYSLWRNKTLYYRVYYS TMED8_HUMAN/185-324 VKRGEVVTIRVPTHPEGKRVCWEFATDDYDIGFGVYFDWTPVTST.....DITVQVSDSSDDEDEEEEEEEE.IEE..........PVPAGDVERGS.RSS...LR.....GRYGEVMPVYRRDSHRDVQAGSHDYPGEGIYLLKFDNSYSLLRNKTLYFHIYYT Q3KQ03_XENLA/94-230 VRRGEVLTVRVPTHPNGKRLCWEFATDDYDIGFGIYFDWTPVTST.....AVTLQISESSDEEEGEETES....PW..........HGREGDVERGS.VYR...LR.....SRYGEIVQVYRRDSHREVQAGSHEYPGEGVYMLKLDNSYSLMRNKTLYLHVYYS A3KP57_DANRE/365-493 VGRGEVLTIRVPTHPDGSYLFWEFATDHYDIGFGLHFEWKDLTAP.....TSSNNGGESTTETKEGTAQA..................EEEKTEQGR........I.....PLVNEVAPVSRRDSHEEVYAGSHQYPGEGVHLLKFDNSYSLWRPKVVYYRVYYT Q5DEX4_SCHJA/356-485 INSGEVYSVRVQTHPSGTSIVWEFATDDYDIGFGLFFEWTEAISD......PEVKHNNHVLPINKGDAPS....................EVINAGN.SEQ...SS.....ILVDEIIPISRQNSQSEVCCGSHLYPGPGTYVFKFDNSFSLWRSKTLYYRVCYT D2A2W6_TRICA/302-444 VGHGETVTVRVPTHPHGTRLFWEFATDHYDIGFGVYFEFGTPTSD.....QVSVHVSESDDEDLEDIEEEIY.DEE..........AIQTGDLEAGS.VAVNGISK.....PLLTEIVPVYRRDCQSEVYAGSHQYPGQGVYLLKFDNSYSLWRSKTLYYRVYYT A7SAW2_NEMVE/29-160 VGRGETMTVRVPTHDSGTCLFWEFATELYDLGFGVSFEWSQPNSK.....NITVAVNESDEDEFTEDSEK...................SAEAEAAT.VGA...AK.....PRVDEILPVVRRPCHEEVIVGSHMYPGRGVYLLKFDNSYSLFRSKTLFYRVYYT A4QNP1_XENTR/385-517 VGRGEVVTVRVPTHEEGSYLFWEFATDNYDIGFGVYFEWTDSPNT.....AVSVHVSESSEDEEEDEGNE..................NPNSEEKAK.KNA...NK.....PQLDEIVPVYRRDCHEEVYAGSHQYPGRGVYLLKFDNSYSLWRSKSVYYRVYYT A8QEB9_BRUMA/52-198 VGHGETVTVRVPTHEEGSCLFWEFATDHYDIGFGVFFEWTISQTNRVSIFKVSVHVSESSDEEADEEFLQVELRTN..........DVESGSSVREKETDQ...NK.....PHVDEIVPIYRRDCHEEVYAGSHVYPGRGVYLLKFDNSYSLWRSKTLYYRVYYS Q2EEM2_CAEEL/183-337 VGHGETVTVRVPTHENGSCLFWEFATDHYDIGFGVYFEWTVADSN.....QVSVHVSESDDEEDYDEALEAE.QAEAGGGGGGAAGQGGPGDVEAGA.MQT...RRVDPNKPRQDEIIPVYRRDCHEEVYAGSHRYPGRGIYLLKFDNSYSLWRSKTLYYRVYYS C3ZQJ8_BRAFL/353-482 VGRGEVVTVRVPTHEDGAYLFWEFATDSYDIGFGVYFEWTIAPSN.....AVSVHVSESSDEDDEEEDEG....................QDVEKGA..RS...DR.....PPTDEIVPIYRRDCHVEVYAGSHMYPGRGVYLLKFDNSYSLWRSKTLYYRVYYT #=GC seq_cons VGRGEllTVRVPTHscGopLFWEFATDcYDIGFGVYFEWTsssSs.....sloV+VSESoD-Ec---spp..................tsu-lEpGs.htt...s+.....PplsEIlPVYRRDsHcEVhAGSHpYPGcGVYLLKFDNSYSLWRSKTLYYRVYYT //