# STOCKHOLM 1.0 #=GF ID YecR #=GF AC PF13992.1 #=GF DE YecR-like lipoprotein #=GF AU Bateman A #=GF SE Jackhmmer:B2PR21 #=GF GA 27.00 27.00; #=GF TC 27.20 43.20; #=GF NC 26.70 24.00; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF DR INTERPRO; IPR025731; #=GF CC The YecR-like family of lipoproteins includes the YecR protein #=GF CC from E. coli Swiss:P76308. This family of proteins is #=GF CC functionally uncharacterised. This family of proteins is found #=GF CC in bacteria and viruses. Proteins in this family are #=GF CC approximately 110 amino acids in length. #=GF SQ 19 #=GS B0RRY4_XANCB/27-101 AC B0RRY4.1 #=GS C9XV50_CROTZ/42-115 AC C9XV50.1 #=GS A4WBS4_ENT38/25-98 AC A4WBS4.1 #=GS C1M5S8_9ENTR/25-98 AC C1M5S8.1 #=GS D2TN00_CITRI/25-98 AC D2TN00.1 #=GS A8AFC3_CITK8/25-98 AC A8AFC3.1 #=GS B5C3V9_SALET/25-98 AC B5C3V9.1 #=GS B7LNZ3_ESCF3/25-98 AC B7LNZ3.1 #=GS B2PR21_ECO57/2-75 AC B2PR21.1 #=GS Q775B6_BPBPP/31-113 AC Q775B6.1 #=GS Q0VRL9_ALCBS/27-101 AC Q0VRL9.1 #=GS B0TQR9_SHEHH/32-110 AC B0TQR9.1 #=GS C0EL23_NEIFL/4-77 AC C0EL23.1 #=GS D0WAQ1_NEILA/28-106 AC D0WAQ1.1 #=GS A6VKB1_ACTSZ/27-100 AC A6VKB1.1 #=GS B0BJQ2_9BACT/44-118 AC B0BJQ2.1 #=GS Q1I8D1_PSEE4/27-100 AC Q1I8D1.1 #=GS Q3KB64_PSEPF/27-100 AC Q3KB64.1 #=GS A8G1K8_SHESH/29-99 AC A8G1K8.1 B0RRY4_XANCB/27-101 TKMSRADGVIALSYE....RNEFQRT.DLSEQQAIHLAEQKCRNWGYKGAEPFGSQS....TECLSRRGFGN....CGSRRVTVEFQC C9XV50_CROTZ/42-115 VGGSKVTGTVRLGIS....EQPLQHA.KVDNYVAQSMANRQCQDWGYAVAEAYGAPV....KTCSVVTGTQ.....CMTESIVLEYQC A4WBS4_ENT38/25-98 NSADSTSGVVRLNMG....QAILQNS.HYDSYVTNGTATRECQAMGYATASAYGQPI....KTCTVVSGSV.....CLNESVTIQYKC C1M5S8_9ENTR/25-98 SEASAITGVVRLTYN....QAMLQTA.RTDDYVTQGTATKECQRLGYASAEAFGQPV....STCSVYAGSL.....CLNTKITLAWQC D2TN00_CITRI/25-98 SEISATTGVVRLSYG....QAMLQNA.RTDDYTAHGTATRECQQLGYANAVRFGQPV....STCSLYAGSL.....CLNEKITIAYQC A8AFC3_CITK8/25-98 SETNPTSGIVRLSYN....QAMMQTA.RADDYVAHGTATRECQQMGYANAIAFGQPV....STCSVYAGSL.....CMNTRITLSYQC B5C3V9_SALET/25-98 SEASPISGIVRLTYN....QPLFFTS.RTDDYVSHGIATRECQQMGYADAVSFGQPV....GTCSIYAGSL.....CLNTRFTLSWQC B7LNZ3_ESCF3/25-98 SEIDVPNAVVRLTWQ....QMILQDA.RTDPYVAQGLANNACLQSGFGQAVAYGQPV....ATCSLFAGSL.....CLNTTFTLSYQC B2PR21_ECO57/2-75 SEVDAATGIVRLVYD....QAFLQHA.HTDRYVSRGISDRACQQEGYTHAIPFGQPV....GNCSLFAGSL.....CLNTEFTLSYQC Q775B6_BPBPP/31-113 VGGSKADGSVTLGIDVPAKYGVTETPVEWDINQANTEADRRCKNWGYSGADMYREGQFPILKTCHAQGVSP.....CWSKTYRVQYQC Q0VRL9_ALCBS/27-101 ADGNQAEGSVTLATD....YSLMQNP.QIDWQQGLQKASTQCQGWGYNGAIPSGKPK....RTCNNETQDGN....CIGWTVNATFQC B0TQR9_SHEHH/32-110 FSGSRSDGVIEMGYL..GGYGWVKNV...NWAATGELASQRCRSWGYEDAERFGLGH....AICIEDNGAGGAFKMCTTAKYTVEYQC C0EL23_NEIFL/4-77 ISGSKADGIVKMAYD....YAWFESP.MINREASQEQAVKRCNAWGYSDAEAFGTSS....KQCIENNGFG.....CERFRVITEYQC D0WAQ1_NEILA/28-106 IDGSHADGTVTLAYE....QNFRSRL.IPRIGQDNEVAKTRCRVWGYNSAEAFGGST....RSCVATPARANAKVPCLIWRFEKRYQC A6VKB1_ACTSZ/27-100 TGGSRADGVINLSYQ....VRYNERA.APNPNQGLRLAQKRCRQWGYQNAERFSGYT....RRCNIAKGRK.....CLSYLITVQYQC B0BJQ2_9BACT/44-118 TGGSRADATVRLSYE....YSVYEKP.QTNETEAINLATARCKTWGYSGAEAFGGVT....QQCNMPGGMGG....CQRFLVTKEFQC Q1I8D1_PSEE4/27-100 TGGSKNDGLVQVSYE....QGQFESG.QSDAAQGLQVATARCKTWGYRNAEITGSEK....SICRTMGQFN.....CLQTTVTQDYLC Q3KB64_PSEPF/27-100 TGGSKTDGVVQVSYE....LGQFESG.QTSAAQGLAAAEGRCKVWGYKSAEVSGSEK....NICRTMGQYN.....CLQTTITQDYLC A8G1K8_SHESH/29-99 VGGSKSDAVVRLSYE....LGALDKH.TPDESDGLKLAKLRCGYWGFSGAKPFDVET....KTCADEQ........CRSYTITKEYQC #=GC seq_cons ssuSpssGlVcLuYp.....uhhpss.psDthtutthAspcCppWGYssAcsFGpss....psCshhsGph.....ChspplTlpYQC //