# STOCKHOLM 1.0 #=GF ID DUF4253 #=GF AC PF14062.1 #=GF DE Domain of unknown function (DUF4253) #=GF AU Bateman A #=GF SE Jackhmmer:C7PV89 #=GF GA 27.00 27.00; #=GF TC 33.60 33.30; #=GF NC 26.50 26.50; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Domain #=GF DR INTERPRO; IPR025349; #=GF CC This presumed domain is functionally uncharacterised. This #=GF CC domain family is found in bacteria, and is approximately 110 #=GF CC amino acids in length. #=GF SQ 58 #=GS C0QYJ1_BRAHW/144-255 AC C0QYJ1.1 #=GS C6JKR4_FUSVA/137-246 AC C6JKR4.1 #=GS D1ARB6_SEBTE/136-248 AC D1ARB6.1 #=GS C3WDV4_FUSMR/146-254 AC C3WDV4.1 #=GS C4V196_9FIRM/536-646 AC C4V196.1 #=GS B0MZA5_9BACT/683-790 AC B0MZA5.1 #=GS C5ERB3_9FIRM/1963-2071 AC C5ERB3.1 #=GS D6ZFY1_MOBCV/365-475 AC D6ZFY1.1 #=GS A8RVW0_9CLOT/1732-1838 AC A8RVW0.1 #=GS B6FY34_9FIRM/202-312 AC B6FY34.1 #=GS Q186Y9_CLOD6/124-233 AC Q186Y9.1 #=GS C3WHX2_9FUSO/138-239 AC C3WHX2.1 #=GS D4CVD4_9FUSO/140-249 AC D4CVD4.1 #=GS A5TXN5_FUSNP/138-247 AC A5TXN5.1 #=GS D0BRH3_9FUSO/139-248 AC D0BRH3.1 #=GS C9MYT8_9FUSO/139-248 AC C9MYT8.1 #=GS C6R3V6_9MICC/184-294 AC C6R3V6.1 #=GS C6R5P2_9MICC/164-273 AC C6R5P2.1 #=GS D1AK08_SEBTE/126-235 AC D1AK08.1 #=GS C0Z8V0_BREBN/145-253 AC C0Z8V0.1 #=GS D3EC00_GEOS4/87-195 AC D3EC00.1 #=GS Q6H059_FREDI/185-294 AC Q6H059.1 #=GS Q2BMH5_9GAMM/110-219 AC Q2BMH5.1 #=GS Q21NT3_SACD2/108-217 AC Q21NT3.1 #=GS A6CFF5_9PLAN/115-224 AC A6CFF5.1 #=GS A4YWS7_BRASO/211-320 AC A4YWS7.1 #=GS Q2SM23_HAHCH/204-312 AC Q2SM23.1 #=GS A6WFG9_KINRD/150-261 AC A6WFG9.1 #=GS B4V9D7_9ACTO/179-290 AC B4V9D7.1 #=GS B5I6X5_9ACTO/170-282 AC B5I6X5.2 #=GS C9YZB4_STRSW/157-269 AC C9YZB4.1 #=GS B5GME0_STRCL/159-271 AC B5GME0.1 #=GS D7AZN8_NOCDD/168-279 AC D7AZN8.1 #=GS C6WP67_ACTMD/170-282 AC C6WP67.1 #=GS A4FP33_SACEN/141-251 AC A4FP33.1 #=GS D2ASR0_STRRD/165-275 AC D2ASR0.1 #=GS D1AES5_THECD/171-281 AC D1AES5.1 #=GS B1MDL9_MYCA9/190-299 AC B1MDL9.1 #=GS C0E838_9CORY/181-292 AC C0E838.1 #=GS C0E839_9CORY/57-176 AC C0E839.1 #=GS D5UY14_TSUPD/149-258 AC D5UY14.1 #=GS D5UH22_CELFN/174-285 AC D5UH22.1 #=GS D3PZ47_STANL/216-326 AC D3PZ47.1 #=GS A8SR58_9FIRM/61-169 AC A8SR58.1 #=GS A7HG39_ANADF/133-239 AC A7HG39.1 #=GS B0C9T3_ACAM1/134-260 AC B0C9T3.1 #=GS C7PV89_CHIPD/115-222 AC C7PV89.1 #=GS B7HCT2_BACC4/100-208 AC B7HCT2.1 #=GS E0ULS5_CYAP2/119-245 AC E0ULS5.1 #=GS C6X3T2_FLAB3/111-217 AC C6X3T2.1 #=GS Q12MS2_SHEDO/140-243 AC Q12MS2.1 #=GS D7W0I2_9FLAO/120-226 AC D7W0I2.1 #=GS D1AIB5_SEBTE/81-188 AC D1AIB5.1 #=GS A8UQF5_9FLAO/121-227 AC A8UQF5.1 #=GS B9XCH3_9BACT/147-256 AC B9XCH3.1 #=GS B4D3V5_9BACT/122-231 AC B4D3V5.1 #=GS B4UEW0_ANASK/136-245 AC B4UEW0.1 #=GS B1ZML0_OPITP/150-259 AC B1ZML0.1 C0QYJ1_BRAHW/144-255 DLILAKIPTTNPYELACYIP.M.GGFNDCPNPETQAAIFKYWYEKYNAYPAVVGYD.TWELWVEK....QPKTEEEARELAIEHYYFCFDRVDQ...S...............GEDYDHGKLA.GTLLKSDVWYFWW.....D C6JKR4_FUSVA/137-246 EVLIVKIPETEPWKVAVWLP.M.GGFNDCPTPAEQAAVFKFWYEKYGAVPGAVTYD.NWELYVDK....PLKENEELEELAEEQFAFCYDIIMQ...G...............CG..DIRSLA.SCLRNSHIWYFWW.....D D1ARB6_SEBTE/136-248 EILLVKIPVKNPWEIAAWIP.M.GGFNDCPEPAAQAAVFRYWYEKYKAVPAVVTYD.VWELKAEN....PPKTEEEAESLAKEQFSFCYDIVMQAARG...............WD..RIRALA.STLKNSSAWYFWW.....D C3WDV4_FUSMR/146-254 ELFIVKVPVKNPWEIFAWLP.M.GNWNECPTTSEHMAISRYWFEKYGAVPISMTHD.VVEYRVEK....VIKTEDEAMEVAVEMYGYCPD.VDQ...S...............YD..TLGLLA.GSLVDSSVWYFWW.....D C4V196_9FIRM/536-646 PVILAKIPVKHPWEIFTYLP.F.GGWNDCPDTSAHTAVAKYWYETDRAVPAVLTYD.TLEYRVPA....PV.APEHAAARAVEQYAYCSDIIEQ...G...............TPGMSISRLA.DSLRKSHIWYFWW.....D B0MZA5_9BACT/683-790 PLILARIPVTEPWKIFAYLP.F.GNWNDCPANPELMAISKYWYEEYGAVPGTFTSD.QLEYELPA....PV.PEDRAMEAAIQQYAFCPD.MDQ...S...............CD..GIGSLA.DTLRQSRIWYFWW.....D C5ERB3_9FIRM/1963-2071 PLILAKIPVKNPWEIFAYLP.F.GNWNECPDTPDLMAVAKYWFEQHGAIPAAMSHD.ELEFELPT....PI.SKERAMEVAVEQYGFCPD.LDQ...N................EDGSIGSLA.DVLWQSTVWYFWW.....D D6ZFY1_MOBCV/365-475 PLILAKIPVKNPWEIFAYLP.F.GNWNDCPDTPQLMAAAKYWFEQHGAVPVAMSHD.ELEFLLPV....PV.PKEKAVDSVVELYSFCPDVIDQ...G...............PEDATVGALA.DVLRQSTVWYLWW.....D A8RVW0_9CLOT/1732-1838 PLILAKIPVKNPWEIFAYLP.F.GNWNECPDTLELMAVAKYWFEQYDAVPAAMSHD.ELEFLLPA....PV.PKEKAIDVAVEQYGFCPD.LDQ.....................NASIGTLA.DTIHQSTVWYFWW.....D B6FY34_9FIRM/202-312 EILIAEIPVENPWEIFAYIP.F.GGWNDCPGNEDIMSISKYWFEKYGAIPFAISNN.TLEYIVKN.....PVDDENKIRFTEEFYAFCPDSVDK...Y...............MENFNIDKLA.KKIYGKKIWHFCW.....N Q186Y9_CLOD6/124-233 KVYIAKIPTIKPYEVFAYIP.I.GGFNDCPRDEEHIAIAKYWYEKHGIFPIAIGCD.TVQYSVKN....LTKDGKKFDDLCIELVFYCEDIIIQ...G...............YE..TLKALK.DVLKRSTIVLFWW.....D C3WHX2_9FUSO/138-239 NVILVKIPTTKPYEILAYFG.M.G........SEGIATVKYWYEKYGAVPAAITYD.EIEFYVER....PVQTFEEARKLAIEQYAFCYGLLWE...C...............YD..TLDELA.SAIYKNVQWYFWW.....S D4CVD4_9FUSO/140-249 DVILVKVPTEKPYEVLGYFG.M.GGYNECPFPAEQVAVAKYWYEKYGAVPAVITYD.TIVFYVER....PVQTLEETKKLAMEHYAFCDDVVYQ...C...............YC..TFEGLA.DALYKNIQWYFWW.....D A5TXN5_FUSNP/138-247 DVILVKVPTTNPYEVLGYFG.M.GGYNECPFPAEQVAVAKYWYEKHGAVPAAITYD.EIEFYVEK....PVQTLEEAKKLAVEHYAFCYDIVDQ...C...............YG..TFEKLV.DGLYKNIQWYFWW.....D D0BRH3_9FUSO/139-248 DVVLVKVPTKNPYEVLGYFG.M.GGYNECPFPPEQIAVAKYWYEKHGAVPAVITYD.EIEFYVEK....PVQTFEEAKKLAVEHYAFCYDIVDQ...C...............YG..TFEKLA.DGLYKNIQWYFWW.....D C9MYT8_9FUSO/139-248 NVGLFKVPADKVYEIPGWFL.F.GGFNECPLPEEIIAISKYWYEKYDAQIVAITDS.EMEFYLKK....FPETQKEAEELAIEQFLVSGDLVFQ...I...............YD..ELEELS.KELYKAKNWYFWW.....D C6R3V6_9MICC/184-294 EMLLLQIPTDDPADIPAYLP.F.GGWNDCPNAEMQLAFTHYWREKYGAIPAALDGADCLEFLVER....PVADPLEAKNLAVEQFAFCSDLPFQ...V...............FE..DFEQLT.EFIHQSRQWYFWW.....D C6R5P2_9MICC/164-273 ELLIMDLPLRDVSGVFAYLP.F.GGWDSSPSPEAMLSIARYWFERDDAYPAVIASD.FIEFYTPV....PVTTRRDAEILAVEHTMVSSAMPVR...V...............YR..GFDKLV.EALYGQHDWYLWW.....E D1AK08_SEBTE/126-235 EILILEIPTRKPWEIPGYIP.M.GGYNECPAPDTQIAVSEYWYRNYRAIPTVITAN.SIEFMAEA....PPQNFQDAEKLAYEQYLFCNEVVSD...G...............AG..SLRKLA.SILKDSTVWSFWW.....E C0Z8V0_BREBN/145-253 ALIVLELPNASGYEAPLWVP.M.GGYNECPLPVYQSVIVKHWQEAYGIKILAVTED.TWIFQAGS....RPQTYEEAIKLAKEHFIFCQYVLDE...................FP..SLGHYA.DYLMKQDVWHFWW.....D D3EC00_GEOS4/87-195 QVILLTLPAEAGYEAPLWVP.M.GGYNECPLPEHQSVIFKHFQQRYQINIVAVSQD.TWILQAGK....RPQTFEEALRLAKEHFIFCQYVMDG...................FP..TLGHYA.DYLMKRDIWYFWW.....D Q6H059_FREDI/185-294 NIVLAMIPTKLSWQVPAFLK.F.GNWNDCPLPTIHVGLMRYWQQKYGAEVVGITHD.VVEMCVNH....PPQNREDAFHLAQEQYMYCADIVDQ...S...............VE..TLNNLA.AMLLNRKVWYFWW.....D Q2BMH5_9GAMM/110-219 NLLGVKIKTDSSWKIPAHFK.F.GGWNHCPSPDVHCAIWKHWQLKYGAKIVGVSND.VIEAYITK....PPKTQEEAMALAWEQYLYCPDIVEQ...G...............VE..TVAKLA.EVLINHDCWYFWW.....D Q21NT3_SACD2/108-217 TLAAVIVQCEHSWQVPAYLG.F.GGWNNCPSPAEHCALWQFWQHKYDARIVGVSGD.VIEAYVNK....PPCTREEAIALAWQHYLYCPDLIEQ...G...............EE..TIANLA.AALLDQKVWFFWW.....D A6CFF5_9PLAN/115-224 KVFIGQVQVETSWQIPAVLK.Y.GGWNDCPEAEVQCAFHRKWQTEFETEICSVAGD.VIECTVNR....PPQDQETALRLAWEQYWYCADIVDQ...G...............CE..TISNLA.ATLLKSPYWFFWW.....D A4YWS7_BRASO/211-320 KVIIGLAPTDDWTTIPAILR.W.GHWNGCPKPEEHVAAFRNWRDRYGAELVAITSD.VINLRVAR....RPQTRDEALALAREHYVYCPDNIDQ...G...............VG..TFSALA.AALMSSDWWYFWW.....D Q2SM23_HAHCH/204-312 AQALMLLPTTKPWEALAYMH.WYGAEN..VGSEASIAMLRRWHDKYGAELVAHYGT.MLQFNAKS....GPKDIFESFELACEQEALAPCTTAL....................AGVLLRDHA.RSLMKTRRWFLHE.....R A6WFG9_KINRD/150-261 PRHLGLVPAARGADVLAVLG.WLGATNHDTAPGVLSSVLRSWEDRFGVRLVALGFD.TVVVSVAA....PPADAAEALPVAAEHLGFCYDAVFQ...................DGPGDLAAYA.AELVGTGAWRFWW.....D B4V9D7_9ACTO/179-290 SPRLALIPAGRGADVPTAMG.WRGPVNHEADTALISTVLRSWEDRFGARVLALGFD.ELHLSVAA....PPLTTAASLPVAAEHFAFCPDNVWQ....................GSGSVRAYADEGVTGSGHWGFWW.....D B5I6X5_9ACTO/170-282 EPRLALVPARRSADIPAAIG.WTGPLNYENDVARLCAVLRSWEDRFGIRVIALTCD.QLVLSVAA....PPTTKDEAEAVAAEHFAFCPDNIIQ...G................DHETLREYAEQAVLGQRIWSFWW.....D C9YZB4_STRSW/157-269 DFRIALVPARRSADIPAAIG.WTGPLNHENDVARLCAVLRSWEDRFGIRVVALAHA.ELVLSVAA....PPTTEAEAEAVADEHFAFCPDNISQ..................DTDNATRPAYA.RTLLNAPLWSFWW.....D B5GME0_STRCL/159-271 EARLGLVAAECGADTLAALG.WQGPVNHEGDTATCAAVVRSWEERFGARVVAIGFD.TLHLSVAA....PPTSHAEALAVAAEHFAFCPDNIEQ...G...............AGPPSLNAYA.ERLVDTEYWTFWW.....D D7AZN8_NOCDD/168-279 GMRMGLVPAASGAEAIAASG.WAGPLNYDNDTAVFAAVVADWERRFGVRVLGMGFA.SLTLAVGA....PPTDSGQALRVAAEHFAFCPDNLWQ...................GSHRDLRAYA.EILVDRPVWQFWW.....D C6WP67_ACTMD/170-282 SLRLGLVAADRGADALTVAG.WRGAAGYVDDTAELSAVLRSWESRFGAQVVGVGSG.TLLLSVAA....PPTTLTEALAIAVEHFAVCPDNVWQ...S...............DEAHPLMAYA.ERLVGDHSWTFWW.....E A4FP33_SACEN/141-251 DTRLGLVPVERGADVLATLG.WSGAANHVSRTAGLAAMARSWEERFGVRLLRLGPD.RLDLSVAA....PPQEMHHAAAVAAEHWTFCPDRILQ....................ESGSISAYA.REIRGRRTWSFWW.....D D2ASR0_STRRD/165-275 RTPLGLVAADRGADVLAVMG.WQGALNHNEWMVPLAAVVRSWEDRFGARVVGVGFN.TLDLSVAA....PPVTPEHALHVAAEHWTFCPDSVIY....................SAGTLVDYA.QEIMGRNAWSFWW.....D D1AES5_THECD/171-281 GMSLGLAAVDRGADTLAAMG.WQGALNHNEWTAPLAAVVRGWEDRFGVRVVGMGFN.TLDLSVAA....PPLTSRHALQVAAEHWAFCPDTMFQ....................GPGTLAGYA.EEIRGKTSWSFWW.....D B1MDL9_MYCA9/190-299 GSLLILAPVSRPADALNALG.WAHAVNYGVADTALSAVLRSWEDRFGAVLTTVDFD.AIEVEVTR....PP.GADLAVPVGYEHYGFCPDNIDQ....................GAGTLSAYA.RQISDTRTWDFWW.....D C0E838_9CORY/181-292 PTALLITPTHRPADVPAAIG.WLGACNYDFAGHHISAVLRSWEDRFGAILTSLDSQ.DMTLMVPP....LTLTDDERTSLALEHYFFCRSLIDD...................TTTFRHQSAA.LATSDIQQWVFHW.....E C0E839_9CORY/57-176 TTQLLITPVPRPADVPATIG.WPGAINYDYSGASVSTVLRSWEDRFGALLTSLSFA.EMDLSISDVRQLAVLTHDELVNLTLEHYVFCPDSLDQ....................GTLKFPCYL.NAISGSPLWPFWSGGTSIE D5UY14_TSUPD/149-258 DGGLILVPVVRPADAPEALG.WWGATNIDYAGADLAAVLRSWEERFGAVLVGIGFD.TLLVQVGR....RPESAAQLQALVSEHYAFCPDNIEQ.....................GLEPDEYR.EGLTEWTHWHFWW.....D D5UH22_CELFN/174-285 DGVIALVPAAHGWQVPVILG.WQGGVNYELEPVDHGVVLRDWHERYGAELVAMSGDQVLELLVDR....PPTTPAEALAVAREQYDYCGDVVDQ...G...............VG..TIEALA.REQAGSASWYFWW.....D D3PZ47_STANL/216-326 DGLIGLVEAEHSWQIPALLP.WKGSTNWELYGAEHATILKHWHERHEVELVSMTWD.ILELYVPN....PPSAEEDALDTAREVHAYCPDLMAA...G...............VP..TLDDLA.VHMVRSRAWYFRW.....A A8SR58_9FIRM/61-169 GVVVDFKNIDHTYEVFAVLGNYWGGWNSTPTAAEMYNRAKEWEERFGTEIVGLSYN.SVDFVLNR.....KLSDIEIEDLIKECEDIQADAACS...G...................GYEEMQ.KIIREKGELHIWW.....D A7HG39_ANADF/133-239 KDMVGLLATGDQRAVIRRMG.T.AGPKRGVTNAQVVSWLSALEREEAFELFEIGPD.YVAGKFLR....AP...KHPEAIARRAAKIAPDLVAG....................HTNPIAGLT.DLIGKHRTLYLIW.....D B0C9T3_ACAM1/134-260 RSLIGVVKLDDHFQIVQFFG.T.AAGNYELSNVDIINKLHAWEKLCDFEIMGGGGD.TLELAFKT....LP...EDRLAFAEDVYDFCPDLMDQGYVGPPLGEGATMEDYAEAMDEQTIEDLV.DYLERNMAVGFWW.....D C7PV89_CHIPD/115-222 PDKYAVLKTNNQFDIIRFRA.T.NGANYDITNDSIMRKLHHLYDKEPFEITGADID.WVEVHLNK....LNP..ADAMTFANDVYEFCPDLAEQ...G...............TE..TVENLA.AEILETKQLFLWW.....D B7HCT2_BACC4/100-208 ECRIAITQGNDQFDILTIQQ.T.NGVNYEVSNIDVIFKLRKWNDRYPFIIIGADHD.WVDAIFSA....LP.TDEEMQSFAQEMYEFCPDIVEQ...G.................TESIEELV.EEIKKTKKLFLWW.....D E0ULS5_CYAP2/119-245 QGKAILIKSYNSYDILTIQL.T.NGANYNITNHDIVHLLEQWAKFCAFQIIGADFD.WLELQFQT....LP...DNLNAFAQEIYEFCPNILTQGYIGESLSEDASIEDWEEALDNQTIEDLA.EFLQKTKTLFLWW.....D C6X3T2_FLAB3/111-217 KKNIAVIKGTDDLDILRYRR.T.DGINHDLENEDIVKKISEWKSKYGLIVIGCSRD.WLQVEFDK....LP...NDIDAFANEVYEFCPDSVDQ...G.................VGSIDKLK.EAIKEMNGIWLWW.....D Q12MS2_SHEDO/140-243 GSGLAVIKGSEPWDILRYRQ.T.DGCNYGLDTQAIIKQLRDWGV...TEVLGVGRD.WVEFDFGR....FA...DDEMALAAELYEFCPDIIEQ...G.................LGSVEKLA.DCLDVSTQITLWW.....D D7W0I2_9FLAO/120-226 DDIITILQSNNKLEPLLFEA.T.NGVNYDIDTQMIINKLKDWDSKYGIELEAVGPD.FVSGKFKN....KP...ANIPKFAKEVYDFCPDIVDQ...G.................VGSIEELE.KSLADSNEFFLWW.....D D1AIB5_SEBTE/81-188 RYSELVITKKTTWDNVLRMA.ESDAINFGFETEDLINKIKEYDEKYGISISHAETD.TVVLEFGK....LP...EDLVELTKDIYEFCPDIVDQ...G...............TG..DINSIA.ESLEGTSSIFLWW.....D A8UQF5_9FLAO/121-227 YYDIIIINGSDPLKLIERIG.T.NGVNYDVYNPDIIKKLKEWNEQVNFKFVVIDVS.RIHAYMNS....LP...NDLKKFSSEVYEFCPDVIDQ...G.................YSSMEEMI.SDYKENKYFWLWW.....D B9XCH3_9BACT/147-256 TVYIAKVPASRNWEVPAYIG.M.GNWNACPEPAEHVAMAKRWHERYGAEIVSITRD.VIEFVVAK....PPNTKESAIDLAKEQHLYCSDIVDQ...G...............CG..SISNLA.ATLLNSKYWYFWW.....D B4D3V5_9BACT/122-231 TVYFAKIPTVHAFEIPAYLQ.F.GGWNACPWPQEHVAILRRWSERYGLEMYAYTGD.VIECEIAR....PPAGRKEALKLAREQYLYCSDIVDQ...G...............VG..SIASLA.AILEVSTHWYFWW.....D B4UEW0_ANASK/136-245 VVYLARIPTVRSWEAFAYLN.Y.GAWNACPATEEHVALHRHWHERHGSEIYAIAGD.VVECWVPR....PPEDRAGAEALAREQCLYCDDIVHQ...G...............TQ..TLLNLA.AELKGSHAWFFWW.....D B1ZML0_OPITP/150-259 VVYLAKIPTPHTWEVPAYLN.A.GGWNDCPDPASQVAVLKYWHDKHGAEIYSLTGD.VLECLVTR....PPSTRQAALALAQEQFLFCADVVHQ...G...............TE..SIEVLA.ATLLNSEVWYFWW.....D #=GC seq_cons shhlshlPspcsa-lhuhls.h.GuhNpsssssphsAlh+tWp-+aGuhlsulshD.pl-hhlsp....PPtstc-AhplAtEpatFCsDhlcQ...s...............ht..olpsLA.ctLhpsphWaFWW.....D //