Summary: LssY C-terminus
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This domain is found at the C-terminus of Legionella LssY proteins, which may be a part of the type I secretion system . This domain is functionally uncharacterised. This domain is found in bacteria, and is typically between 182 and 195 amino acids in length. It is often found in association with PF09335 and PF01569. There are two completely conserved residues (P and W) that may be functionally important.
Kozak NA, Buss M, Lucas CE, Frace M, Govil D, Travis T, Olsen-Rasmussen M, Benson RF, Fields BS;, J Bacteriol. 2010;192:1030-1044.: Virulence factors encoded by Legionella longbeachae identified on the basis of the genome sequence analysis of clinical isolate D-4968. PUBMED:20008069 EPMC:20008069
External database links
This tab holds annotation information from the InterPro database.
InterPro entry IPR025902
This domain is found at the C terminus of Legionella LssY proteins, which may be a part of the type I secretion system [PUBMED:20008069]. The domain is functionally uncharacterised. There are two completely conserved residues (P and W) that may be functionally important.
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Curation and family details
|Number in seed:||48|
|Number in full:||217|
|Average length of the domain:||174.90 aa|
|Average identity of full alignment:||23 %|
|Average coverage of the sequence by the domain:||33.97 %|
|HMM build commands:||
build method: hmmbuild -o /dev/null HMM SEED
search method: hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
|Family (HMM) version:||1|
|Download:||download the raw HMM for this family|
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