# STOCKHOLM 1.0 #=GF ID DUF4275 #=GF AC PF14101.1 #=GF DE Domain of unknown function (DUF4275) #=GF AU Eberhardt R #=GF SE Jackhmmer:Q7UUJ6 #=GF GA 27.00 27.00; #=GF TC 31.60 31.50; #=GF NC 20.20 18.50; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF WK Domain_of_unknown_function #=GF DR INTERPRO; IPR025454; #=GF CC This family of proteins is functionally uncharacterised. This #=GF CC family of proteins is found in bacteria. Proteins in this family #=GF CC are approximately 140 amino acids in length. #=GF SQ 13 #=GS Q65D20_BACLD/1-133 AC Q65D20.1 #=GS A4IT36_GEOTN/1-144 AC A4IT36.1 #=GS E8SXF4_GEOS2/1-142 AC E8SXF4.1 #=GS A8FCM7_BACP2/1-133 AC A8FCM7.1 #=GS C0ZH85_BREBN/1-140 AC C0ZH85.1 #=GS A7GUU7_BACCN/1-146 AC A7GUU7.1 #=GS C2N900_BACCE/1-146 AC C2N900.1 #=GS A3DI63_CLOTH/1-139 AC A3DI63.1 #=GS A3DG53_CLOTH/1-144 AC A3DG53.1 #=GS Q24P80_DESHY/1-141 AC Q24P80.1 #=GS C2BEP2_9FIRM/1-140 AC C2BEP2.1 #=GS A4BDL6_9GAMM/1-124 AC A4BDL6.1 #=GS C4V3R0_9FIRM/1-153 AC C4V3R0.1 Q65D20_BACLD/1-133 MY....IISKLER..QNVKVTEIPKWGSYLRKTWENRFAASMELPERDAILVSH........FLWHLFSYGMK...PCFTGGQADQAFSEQPKRDCFLFYQHTDDAYILEHAEQLIAADLKG.......EE......DAYITDKHMTWTYAVTHESAY.GPYFA A4IT36_GEOTN/1-144 ME....LFHKLAR..RNITISKQSGFGAKWRQQWEEVFARHLTAEEKRNIHLYDDDGAN..GYLWHVFSYETR...DCLTEEEAEAAFDREEKKCCYIFFQHSDDAFKVEDASGLKAVDLVT.......ENGEYA..DLYVVDSEFNWTFVITHERGWLGPYFS E8SXF4_GEOS2/1-142 ME....LFHQLAR..RNIKISK.HGVGAKWRQRWEEVFAGHLTVEEKQHIHLHNRNGVN..GYLWHVFSYGMR...GCFTGEEAEMAFDQEEKTCCYLFFQHHDDGFKVEDASSLKAADLAA.......GNGRM...DLYVVDSGFNWTFVITHESGWLGPYFS A8FCM7_BACP2/1-133 MK.........NN..QLIKIHK.PEWGDRLRARWRERFASHLSMKEQNEISIDD........FLWHLCSFEMV...TCLEKAEAIDAFLQQSKDKCTVFYQFVDDAYLFENASSLSINDLPY.......QTNHMDYNDMYVMDWNEKWTFVMTHETDY.GPYFI C0ZH85_BREBN/1-140 MK....LADRMKE..KNTKTTELSIWGPYLREEWEKHFASHLTEEDKERIFLKNKDGYQ..GYLWHLFSYKLR...DCLEREEADEAFQQVAHESYYVFYQLANEVLILENAARFSVADLEK.......EY......DVYIVDKDFTWTYVKTHETEWCGPYFC A7GUU7_BACCN/1-146 ME....FIDRLKH..KKIKGREILKWGPYFRKRWASHFASHLSEEEKEEIGLYSNHDAC..GYLWYMFSYKKK...RYLEGEQAEQAFHGERKNSCYIFYQHCNDVLIIKDANALHAHDLLR.......ETDDLFKGDIYVVDDDFTWTYVKTHEARWHDPYFT C2N900_BACCE/1-146 ME....FLEVLRK..KNMKVREFQSWGVYFRKLWEDHFANHLSDEEKEDIFLYGDKYGC..GYLWHIFSYEKK...KCLEGKEAKNAFHNEVKKDCYIFYQHCDEVLLIKDASLLHMDDILC.......ETDDMYKGDIYIVDKEFNWTFVKTHEHRWCGPYFT A3DI63_CLOTH/1-139 ME....VIDKLKS..KNIKVTEVDKWGPYFRKRWEDSFAGHMSYDEKKAIYLYDDDGAC..GFLWHIFSYEKR...KCLKGEEAKRAFDVERKDFCYIFYQLSDVVLILEKASGLIASDLDT.......EF......DVYVADKEFNWTYVKTHEEEY.GPYFC A3DG53_CLOTH/1-144 MELNMSINEILKN..KSIKVIEVPKWGTFLRKQWENVFANHLSHNEKKEIFMYDDDGFC..GYLWHVFSFEKR...VCLKEQEAETAFNNERKNSCYIFYQHTDDVFIVEEAANLNANDLLN.......EF......DVYVVDKEFNWTYVKTHETGWCGPYFS Q24P80_DESHY/1-141 MM...GIINVLKN..KKIKVTEIPKWGAFLRKQWEDNFANHLSVEEKKSIYLWNNSGIC..GYLWHLFSYEKR...ACLKREEAEKAFNNEHKGSCYVFWQHTDYALILENAYILNAEDLED.......EY......DIYVVDKEFNWTYVKTHETLLCGPYFG C2BEP2_9FIRM/1-140 MR.NLILSGIIIF..SKLKMKTLRSISMNFEKEWIKHFTKDVSKKDLDFRVRDSGD......FIWHAF.LDLIDKGSYLVGNEARKTFDKVNKVGTIYFFPWDENKVFENNIEEITADMLDR.............YDEVYLVASDWSWTNIKTHEEEL.GPYFC A4BDL6_9GAMM/1-124 ME...PFVEIFPG..RVLRILEPSSAAAI.ETQWMNTFCHNKQGVNTRQ.............YKWHIFSSGRY...EALEGKLAVDAYERHSATEFFVLSNSSQEVIV....TDLRPQALSG..............TDCYVFPVNMAWTMAFTHEEDRLGPYFA C4V3R0_9FIRM/1-153 ME.....LEIFKRHLRILGKEEAERYRDLYIKKFVDPYTHAKCYQERIECLHEFSDGLCYEGYLWDFLKSETY......IGETQIEEYRNFLKQVFVFWDNNSRDRIFIKDYWKFDKKDMIELDYNLLLDHLEFFPEDIYITNKELSWTIVFTHEDDLLGKRLI #=GC seq_cons ME....lhchLcp..+slKlpEhspWGshhRKpWEcpFAsHLohcEKcpIhlhsscshs..GYLWHlFSY-p+...sCLcGcEAcpAFcpcpKssCYlFaQasD-slllEcAspLpAsDL.s.......Eh......DlYVVDc-FsWTaVhTHEscahGPYFs //