# STOCKHOLM 1.0 #=GF ID DUF4297 #=GF AC PF14130.1 #=GF DE Domain of unknown function (DUF4297) #=GF AU Bateman A #=GF SE Jackhmmer:C7PUH4 #=GF GA 27.00 27.00; #=GF TC 27.10 27.10; #=GF NC 26.20 26.20; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF WK Domain_of_unknown_function #=GF DR INTERPRO; IPR025382; #=GF CC This presumed domain is functionally uncharacterised. This #=GF CC domain family is found in bacteria and archaea, and is typically #=GF CC between 207 and 221 amino acids in length. #=GF SQ 34 #=GS C3MFF5_RHISN/12-221 AC C3MFF5.1 #=GS A6XU17_VIBCL/12-218 AC A6XU17.1 #=GS A3YBA1_9GAMM/12-218 AC A3YBA1.1 #=GS Q7N9G0_PHOLL/12-218 AC Q7N9G0.1 #=GS Q13PA4_BURXL/32-247 AC Q13PA4.1 #=GS D0J4L7_COMT2/12-223 AC D0J4L7.1 #=GS Q121E3_POLSJ/12-224 AC Q121E3.1 #=GS C7PUH4_CHIPD/17-231 AC C7PUH4.1 #=GS C3AWC1_BACMY/12-229 AC C3AWC1.1 #=GS C3FZZ4_BACTU/18-232 AC C3FZZ4.1 #=GS B0S399_FINM2/11-208 AC B0S399.1 #=GS Q8RFV8_FUSNN/2-200 AC Q8RFV8.1 #=GS F1T6L3_9ACTN/11-209 AC F1T6L3.1 #=GS D0YWZ2_LISDA/19-232 AC D0YWZ2.1 #=GS Q7N5U6_PHOLL/10-220 AC Q7N5U6.1 #=GS A5FKT7_FLAJ1/12-221 AC A5FKT7.1 #=GS Q21NM0_SACD2/17-224 AC Q21NM0.1 #=GS A4TNV5_YERPP/15-224 AC A4TNV5.1 #=GS A0K3A0_BURCH/28-235 AC A0K3A0.1 #=GS C5Q1F9_STAAU/2-189 AC C5Q1F9.1 #=GS B5V0C4_BACCE/9-229 AC B5V0C4.1 #=GS C3X7Z1_OXAFO/12-238 AC C3X7Z1.1 #=GS D0XHY6_VIBHA/57-278 AC D0XHY6.1 #=GS Q669M5_YERPS/11-237 AC Q669M5.1 #=GS Q649C8_9ARCH/26-233 AC Q649C8.1 #=GS B1ZQ28_OPITP/36-245 AC B1ZQ28.1 #=GS Q0JWR9_STRAM/9-276 AC Q0JWR9.1 #=GS B1XBU6_ECODH/3-216 AC B1XBU6.1 #=GS C2HYG8_VIBCL/8-237 AC C2HYG8.1 #=GS Q0HEX4_SHESM/9-238 AC Q0HEX4.1 #=GS C6B4V0_RHILS/12-225 AC C6B4V0.1 #=GS C1D7V8_LARHH/6-217 AC C1D7V8.1 #=GS D1P3D1_9ENTR/7-217 AC D1P3D1.1 #=GS D2BRX9_DICD5/6-216 AC D2BRX9.1 C3MFF5_RHISN/12-221 EPENGGRTAIDRFDFQTAWGISKVLKLHAADL.NYAVAFEFHDDIVSLDD.ADAPTKA..VFYQVKTQEAG...NWTITRLVDR.............................PMSTGKVPKPK.......ASFVGKMFGN..FKRFG.SAAEKLVFVSNQPL..VEIGTKYGE.............ASFSTAKPEDVA...KFVTAMKLENKGFKEVDHLGYFHFD..YCELN.LASYEQAVFGEVSLFLK.DHTSAEPGSVPFTLH..LANEGKRRSK A6XU17_VIBCL/12-218 QSERGGEIAQRGFDYQTCWALSQMLEYELDGK.DYVFIFEYHDDVLILDS.EDDPQDL..TFAQVKTRES....NWTVHNLLKS...............................TEKKPI...........SIIGKLFLH..QKNFS.GYSPKLLFVTNASF...NFHTKAGGKTCFDV.......NSIESTDQEKFK...QA...IKEQVELEQEHIDLSTLRFV..QSSLS.LDDHMTHLKGKLCDFLG.KKYGESTTLSPNVLATLLESECRQKSK A3YBA1_9GAMM/12-218 QSERGGEIAQRGFDYQTCWALSQMLEYELDGK.NYVFIFEYHDDVLILDD.EAIPQKL..TFAQIKTRES....HWTASSLSSS...............................TKAKPV...........SIVGKLFIH..QRNFS.DYSPELMFVTNASF...NLCEQNGGKSSFNA.......NEIKDEYQISFK...QA...LRDQVKLDDARIDLSVMNFV..QSSLS.LEDHITHLKGKLCDFLS.KKFGDSSSLSINVLVSLLERECREKSK Q7N9G0_PHOLL/12-218 QSERGGEIAQRGFDYQTCWALSQMLEYELDGK.NYVFIFEYHDDVLILDD.EYSPTDL..TFAQVKTSES....HWTAYDLHKS...............................TKRKPI...........SIIGKLFIH..HRNFC.NYSPQLLFVTNASF...NLCEKNGGKSLFSA.......SEIKDEHKISFK...QA...IKDQVKLDDENIDLSILKFV..QSSLS.LDDHITHLKGKLCDFLC.NKFGDDTTLSVNVLAALLEKECRNKSK Q13PA4_BURXL/32-247 LHEFGGGHGNKGNDFARFWLINEMLALTEAGETDFLFILEYVQDIARLDK.PQSPATI..TLYQLKKKEGN...VWDLNSLAGL...............................TAKGKQVKA.......DSPLAKLLKS..VLGFK.TLAADAEFVSNTRF...RVELAAGGTALSMDYVAL...SELTPERQTHLR...DS...TAARHGVAKTDIPLQRIGLR..YAPIE.VNDMRVHVIGAAHGMLK.KLSAAHAAQ.ADSFVDALFAKLATASR D0J4L7_COMT2/12-223 TKERGGRHGGKGHEFQRYWALCHLLQVDLEKD.DYLLLLEFIEDVAVLNS.EFSPGQM..ELYQLKKKEGSS.TKWTKTNLAKP...............................PKEGK............SILAKLHDS...KSIAKDETAAIAFVSNVPV...DLTLSSGDDPTGLSEFSA...SQIKSTLLADLK...SS...VATELGCDLDDIDFDNLKFI..RSPLA.MDDLESHATGKVATFLA.TKFPDQSPR.ADVLCKAIYSELKVKAT Q121E3_POLSJ/12-224 TKERGGRHGGKGHEFQRYWALCHLLKLDLEQD.DYLLLIEFIEDVAVLNA.ASTPTEL..DLFQIKKKEGATGVKWTKTTLSKP...............................PKDGM............SILAKLYES...KRISPDSSASIAFVSNAPV...DLTLHDGKASTDHEQFSA...SEIEKDLKESLQ...KS...IAGELSCTEQEIEFGSLTFI..KSPLA.MDDLENHAIGKVSSYLG.QKFPTHSAR.ADVFCKALYGELKIRAT C7PUH4_CHIPD/17-231 PRENSGSNSSSRFDYQKDWSLCRLIELHQCSQ.DYLLIFDWHEDLVLMDS.GENPRKV..EFYQIKGKKSG...NWTINSLIKS...............................QKDELGNPL.......LSIFGKLYDC..RNKFC.DETASLNFVSNAVF...SVSLPDKKQNVQLESVCL...LDLNEVEQKKIT...DK...LKEEHPTFNKGEFVSITNLK..TVSLS.LDDSATHAKGVITNLLE.LLYPNENFN.ISSIYRSIFDEIRRKAN C3AWC1_BACMY/12-229 PPENSGSRSANRFSFQKNWALIKILELHKDKL.DYSIVLDYHDDVLVLDS.ESNPEKI..DFYQIKTKSTGKS.NWTIAALSKF...............................SEGKDKQIL.......NSMLGKLYKN..KLNFP.KETKSLNFVSNKAY...TIKLNDNKNAKDSAAILIPF.STICTTEREKVE...KE...LKKEMNITECGDIFDCTFLH..ITPLS.LTESKEHAIGKSSQILR...EMGYFKVDPDLFYKFLYGEIELRND C3FZZ4_BACTU/18-232 PRENSGSKSANRFDYQKNWALCKLFEIHLSKD.DYLIVFDYHEDIILTDS.ETNPQKI..TFYQIKTKETS...HWNITDLVRP...............................KKTKDSSKA.......FSKIGSLYKN..KLLFK.EVADSLHFVSNTYY...NVELEDETPANNIKELCI...SRLTESQKKTII...AK...LKKELELENLQIEKDLLYLD..ISPLS.LKENAEHAKGHLVQFLE.KIDPNLRYN.GNIIYSVLFDEINRRNN B0S399_FINM2/11-208 PLDLAGSRTKNRFRVELLWGVGKLIDAYKLYD.DYTIVFDFKCDIELHRD.....NGL..DFYQVKTINRG...NHSSKTLTKR...............................KGNSR............SILGTLYAL.....YNPNHNIKLAVVCNKHL...KIDSKEDLRKEVCL.......GELDKTVIDFIE...DK...LQEELKLSE..VILDNVFYV..CESMD.LTNPHYALLGKLIEAFQ.EIKNEEPNN.PNALFRLVSDTAQKKAS Q8RFV8_FUSNN/2-200 PKDLSGSITKNRFRLELLWGISKVIDIHKEGK.DYTIIFDFKCDIEIHRD.....NEL..FFYQIKTKKTG...SYNEKDLCNK...............................KNKEKN...........SILGKLYAL.....YSPEHDIKLAIVCNKQL...KIKRKDIDFSEQCF.......AKLDQGIIDYIK...KE...LCKELNLKT..INLNNVFYI..FDNMD.LLNPENAIRGKLIKSFE.EIEGEEPQN.PNALYRLVYDTVKDKAS F1T6L3_9ACTN/11-209 PKDLSGSIAKNRFRLELLWGISKIIDEHKANN.EYTIIFDFKCDIELHKD.....DEL..DFYQIKTKKSG...NYNSNNLCKK...............................DKNENN...........SILGKLYAL.....YSPNYNIKLAIVCNKQL...KIKNKEIDFPEQCF.......ADLDQDVLDDVR...EK...LCAELKLNT..VCLDNVFYI..FDNMD.LLNPEDSIRGKLVKSFV.DIKGEEPQN.PNALYRLVVDSVKEKAS D0YWZ2_LISDA/19-232 QDEDAGALTFAKYWYQYNWALLHLFNQMPNFN.NCSITMETHEDVMFISNIDYNETKI..DLFQVKERSKSG..NITSNVICRG...............................SKDKP............AIISKIIKNITKERLV.KRLNSIALVSSTDY...SFKLKNEDDKISSYHSVNF..NHLSDEVKNEIK...KA...VLRDLDISEIP...NFLYFIRGMQTTS.KDESTLLIIGIIAKYID.SIDPNSSSK.PKLIYDAITTELLKIGC Q7N5U6_PHOLL/10-220 QREISGATTFGKYDFQYHWALCRIIEKHKSNS.DYALLIEYHEDVVIADSLYGSSAKF..EFFQVKNTGK....PFTSDALTKR...............................EQGAEGAKS........SILGKLLSSCIGTDYE.ARITEIGLVSSSGF...SFEQRDKKLKLDIITS.....GDLSVDCLSGLT...EK...LKDELGIALLP...ENLKFI..VPKIK.LENQEEFVIGRFAELVN.EIFPNSHCN.AVNIYRAIIDEIHRKGQ A5FKT7_FLAJ1/12-221 QREKAGSQTKGKYNYQYHWALYKVLSEHQLRK.EYAVFVELHEDVVICDSLNAEKAKF..ELNQVKTTSK....NMSHNELTKL...............................KKGVKGS..........SVLAKLVDNTNKKGYS.PKINSLNLVSVYPF...TLELKQKGVILEKITL.....EDLSDSQVKKLE...DA...IEKELGEGVALP..KNLQFI..VSNLS.EKNYQNDVIATISSLIE.KMHPESYCK.PNDIYRLLIDEIDQKGV Q21NM0_SACD2/17-224 KREKSGSDTFRKYNYQYHWAFCRILDEHEAGN.EFALFIEEHEDVTIADSLDVSETAF..ELNQVKETSK....RHTIHSLTSV...............................SKGESK...........SLIEKLAESCCDKSYS.QRISKVNFVSTGGY...SFNIHKKGYSFEVIGS.....GELSNEEVKKVE...DTISNISGAEGF......IPKLAFV..IPSLP.ERGFDLVVEGKISSLIS.KIAPGLKYD.ANSIYECVIRDLNRKGE A4TNV5_YERPP/15-224 QRESAGAQSYDRFEYQYHWALCKAFSSYKESN.DFAIFMEYHEDVVYANSIDKNKVKF..TFNQIKANAKK...TYTAKVLTKR...............................ENGTKP...........SLLGKLCSSVSDKKYF.EKVEKLDFITTSGF...NLT.KNNKLNLASYKL.....SSLSSDEASEII...KC...LSDELA.NFGKFPQEIIHFT..TSDIP.LESYYEHTISRITDSVE.EVYPQHLLR.TKDIYRILMDSLRIRGK A0K3A0_BURCH/28-235 QREKAGAATFDRFNFQYDWALYEFLEQHKLNQ.VSIVFVEFHEDVVFSSSLDAADARF..VFCQVKAGASA...NFNKKSLVKR...............................IKQKP............SVLGKMFTSVGDKKIA.ARVDKVRLVATGGF...KLELAEKGFQLEEIPW.....DALHQETANEIS...AA...LAAELGTDCA...LEKLHFH..KPQLP.ELQHRRAVIGLIADLIS.ERVPNGGGD.CQAIYHVLQDELRRKGV C5Q1F9_STAAU/2-189 VRENGGANAQRGFNYQNC..VISLVAIRNYKKPNFKIYVEADEDFEVNYGDDYH......ACIQVKGEK.....NLTFNKLLKG...............................ENGKL............SIFEKNLSS........GKSDSVYKIVVFSF...SRKDMESMQEQTDEEELFSNSWLLSNDQKNKVN..................NDRVENFSLVKTAFDND.MKNARIYLKGELV.....QQNIVVEGR.AEVILNELFQQILQKSE B5V0C4_BACCE/9-229 LREQAGSNSYNRFEYQVHWIVYHMIQEYKKNS.EFYIFCEFHDDMTKTSL.LEKPNCA..EFFQIKTTERFK..QWSLKNLFKT...............................YKKQGGGIK.......NSFLGFLFYN..FLKFS.EECTKCHFVSNIGM...DETVRVWQSVIEDRKELKTEEPSLYNEIKGLLR...EEYKDLEIEEFNNVFEIFIQNTFLY..HGELP.LENYEKVVAGSFFVMLE...NDKIYTSNSNKILKDLIEEVRKKSK C3X7Z1_OXAFO/12-238 PRENNGRDTIARFRAQFRAASIACLSILNGKD.TDRVYCDYHDDFVVRKK.SADNFTY..DFYQVKTKAKRNY.QWSVSDILAL...............................NERKQQKNKRTLEGVRDSFVGRLIIH..SINFE.DTCNKVTFMTNVQL...KDAVENIISELESDSFENKHLKFIVDNFNDVFE........IKNPITVDVIEKHLKKLVF...MPGVSYLDPDSTGLTEEARSAIYHYSEIDLTQSEIEKIIKNLIDLVEKKSF D0XHY6_VIBHA/57-278 PREQDGRDSFERYRAQVRSASIAALTILEGSE.VDRVYCDLHDDFVKRRS.DGG..GY..DFYQVKTKSKQNH.NWSLNEVFGI...............................KSRGNTQSP...EDIENSFASKLLLH..TIVFD.DNCNSVIFQTNINN...HDHIESVIKDISSGEFTNKHTKILIDSFNECIS........KENLYSEDEIKKRLKKLKF...ETDVQYLKSKNNNFDAIVRDKIYRYSEVDLDYFDTQEIIMKLLDLVSKKSS Q669M5_YERPS/11-237 PREQAGRDTLERYNAQVRAASIACLSILEGKD.VVRVYCEFHDDFVIEKN.KLGKIAY..SFVQVKTKDKLSD.IWKLNDVFGI...............................LTRNSKKKPQTDEKVVNSFIGKLIQH..TVNFP.ETCENIIFMTNTHV...NEDIDAVVTDLLNEDFSNKHTLFLIEKFNGFFS........PALSLTDEQIKVNLKKIII...NSDVQYIKSQNNNFESLAKDVIYKYSEIDLQYVEAKEIIISLQSLVNSKSS Q649C8_9ARCH/26-233 DTTDRGDDTQRRFRYQHAYAAIYSLKLLDEEPEYIEIYCEQFEDILIKRS....DGKF..AGMQIKTRESGQEPFKTTDSAVK.................................................ISLKRFLKL..EKDHG.NEFYRYVFVTNGGFWHSKENYNNLRYLLRKVHENSDTSIFGESEFSKILE........IAGEVDGIDHNIIFSTLKKLELSQGGPGINDVQPRLIGLL......PEYPDLAYRSYPELFELSSRLISKMAE B1ZQ28_OPITP/36-245 NDSDPGDETAKKYRYQYAYGVILWAACHRREKDYVALWCEQHEDFLGQVT....EKLF..DAYQIKTLKSGVW.QWNHDELVKT..................................................VKRFVAL..DTEFP.GQIREFFFVSNAPC...SDSEATDRIHLSPLPVLRVLTNQPYGPYPECCE...RCLTDLATRAGCERGAVAAVLCRMM..LSVGPPEPSFEAEIQQNHLPHV..EGCRDLAPRQLADLLGALITRISRASS Q0JWR9_STRAM/9-276 TPDHSGSVVLRRYEYQAHVTARAVLEMLADNA.VQHVTCEHIEDVIVARNWGHATDGLFWDFQQVKARDATT..PWTFRDILSRGPLKSLWRTYGAVKDQGLTYGLTVALEGSFDSTDALMTALAYGEGADNGRCTERVGAHLNADFK.EVSTFLGMIRIQEL.PRSGDIEVGNVAFLRELGPSLGDAEISGLYAELINRVRSAMQGRLDPQWTERSGMQDQPVDLLGRRIRPSAIADIRQRLQPP.......EYLLLTGSSRPGGVEAAQIHERRSAAP B1XBU6_ECODH/3-216 SNDSGGVAAKHGFLFQDCVAAYHVTRMLRDKT.IRSVRCEVTDDIDIVSD.....GYI..DFVQVKSTGKT...RWNISDIVQN...............................SKGADKKT.........IPCSSILHKSMQCESDLSLGRRYSIVTEEKV...NKTLEYLTISPNARLD.....KPGRQELIDDLN...KRTDNFLTDSGISVSDWIDAATWEV..FSSLRELELLGIKNIRLASQDL..HGVILSSETVAEDIWCRILDTVTRKGE C2HYG8_VIBCL/8-237 QSDSGGVAALKGFTYQNLAAAYYVLSMLRDKS.LTSVRCEVVDDIDLVYD.....NRI..EYVQVKTTDGDS..KWCIKDFAEA...............................TTKTVHPTGRQRVNQTISQEDSILHKSILCDKD.RLPGFFRMLTPREV...TDSLRYLKVPLSDRGEKIQERGPLLKRLSAAVNRHRKKLPPFSSPNGNDTEYWLDHAEWTV..IPNREHLELLCTKLILQSAHQ...KGIYLSANEDPERILASLLKNVTDKGA Q0HEX4_SHESM/9-238 QSDGGGVAALKGFTYQNLAAAYYVLNMLQDKS.LLSVRCEVIDDIDLIYA.....DKI..EYIQVKTTDSDT..KWCIKEFAEA...............................SIKTVPPTGRQRVNQNISLEDSILHKSIKCDKE.KLPSFFRILTSRDV...TDALRYLKISIIDRNEKTQEREPLLKRLDTAINRNRKKLPPYTSPNGNDTEYWLDHAEWTV..IPNREHLELLCTKLILQSAQQ...KGIYLSANGDPERILASLLKNVTDKGA C6B4V0_RHILS/12-225 ASDAGGVKARQGFTFQDHVAASFLLDMLSDPA.LLQVECETGDDIALRWLRNGADVT...EYVQVKITDGES..NWNLTEICER...............................RAKRVG..............TSLVEISLGTDKF.PVDALFRFISIRDV...NHTLRPLKTPRDRRFQPHV..VDALTKLGTQIS...NKLRGVTSPNGKSVPEWVQACLWQV..PGEKEAVQQKNINRIHRLFE....SEGEAIFASASAKIYEGLVTIARNAGD C1D7V8_LARHH/6-217 QSNAGGPAARQGFKYQDHVAVSFIFKMLRDSS.YSQVECETADDIVAVSHHSSGMYVY..EYIQVKTTEDDR..KWSVTEITAL...............................DGAKAN..............SSLLHKSLKCDVR.PGLARFRIVTKRDV...AKSLEGFKTELDKRVL.....PDTTTERGKRLQ...KQFKTFTSPQKRDFTYWADNCVWQV..YGDVESLEAVNIKALSQLAE....RLGNRPNFTQLQAIYDEFLEMADVAAT D1P3D1_9ENTR/7-217 LSDAGGPAARQGFKYQDHVAVSFIFKMLRDSN.YSQVECETADDIVAVYQYAGQILN...EYIQVKTTESDG..KWNLKEITAL...............................DGTKAN..............SSLLHKSLKCDVR.PGIARFRIVTKRDV...ARILEGFKKEIDKRML.....PDITTTRGVALR...NKFKTFVSPQKRDFLYWAENIVWQV..YGDVEALEAVNIKALAQLAE....EQGNRPNFTQLKAIYEEFLEIADKAAT D2BRX9_DICD5/6-216 LSDAGGPAARQGFKYQDHVAVSFIFKMLWDSN.YSQVECETADDIVAVFQCAGQLIN...EYIQVKTTESDS..KWNLKEITAL...............................DGTKAN..............SSLLHKSLKCDVR.PGFARFRIVTKRDV...AKVLEGFKKEIDTRVL.....PDITTARGVALR...KKFKTVVSPQKRDFLYWAENFVWQV..YGDIEALEAVNIKALSQLAE....RLGNRPNFTQLQAIYDEFLEIADKAAT #=GC seq_cons .pEpuGstutptFcaQhpaAlhpllchhpsps.shtlhhEh+-Dlslhps.t.t.sph..-ahQVKTpcss...pWohssLsch...............................pppp.............Shlu+Lhpp..pppas.stssplthVostsh...shslcshphshppt.......splpsphtpplp...pp...lpsphshsp..h.hstlhhl..hssls.Lcshppplhuplsphl..chhsp.stp.spslhctlhcplcc+us //