HMMER3/b [3.0 | March 2010] NAME YhfH ACC PF14149.1 DESC YhfH-like protein LENG 37 ALPH amino RF no CS no MAP yes DATE Fri Oct 5 17:00:27 2012 NSEQ 17 EFFN 3.017334 CKSUM 2993235538 GA 27.00 27.00; TC 27.00 30.00; NC 26.90 25.10; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.8925 0.71958 STATS LOCAL VITERBI -7.9905 0.71958 STATS LOCAL FORWARD -4.1611 0.71958 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.91673 2.18218 3.16598 2.25555 3.16344 2.96765 3.78840 3.13176 2.43342 2.82718 3.56470 3.07139 3.46401 2.98806 3.09894 2.97391 3.01285 3.28801 5.59708 3.31115 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.00000 * 1 3.64890 4.96997 5.43083 4.83325 3.48534 4.88270 5.17572 1.92277 4.65672 0.92091 1.68208 4.98154 5.08934 3.20255 4.69001 4.21697 3.86415 2.87985 5.47010 4.42014 1 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 2 2.85082 5.21084 2.85171 1.72425 4.49847 2.94339 3.84410 3.09159 2.25715 3.49123 3.36976 3.14376 4.04154 2.96321 3.08712 2.84464 2.08027 3.15561 5.67977 4.30651 2 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 3 2.85330 5.31957 3.11403 2.56153 4.64782 2.94867 3.82159 4.12109 1.85226 3.61773 4.36610 2.31456 3.18860 2.67293 3.05032 2.16740 2.72933 3.70146 5.76326 2.89489 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 4 2.87383 4.48834 3.95067 3.37797 3.61294 3.90082 4.17540 1.87122 2.46205 2.68998 2.63518 3.72400 2.71236 3.58699 3.60391 2.21122 3.10656 2.19922 5.08891 3.87386 4 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 5 2.23944 4.41889 4.13590 3.55974 3.54325 3.92795 4.23876 2.87715 3.47050 2.41839 2.72897 3.84096 3.31691 3.72291 3.71727 2.45318 2.06504 1.68699 5.03669 3.83422 5 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 6 3.05540 5.50236 2.50306 1.00307 4.80987 3.68776 3.99694 4.27930 2.81809 3.79870 2.73116 3.16639 4.15952 3.12344 3.32755 2.53443 3.30238 3.87646 5.96840 4.55364 6 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 7 4.14422 5.36670 5.73548 5.36425 0.56943 5.23140 4.81242 2.02117 5.19415 2.34626 3.78626 5.21218 5.46618 5.11546 5.15340 4.65954 4.38471 3.02967 4.91421 3.30459 7 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 8 3.99719 5.28376 5.26742 4.91280 0.70688 4.86148 4.15203 3.77213 4.74163 3.23665 4.40049 4.66924 5.20160 4.72244 4.75201 4.21924 2.33335 3.64652 4.31233 1.71187 8 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 9 3.97707 5.98847 4.66771 3.66550 5.66735 4.46501 4.15469 4.87341 1.68237 4.15952 5.06253 3.95361 4.75993 2.63243 0.61274 3.93614 4.04411 4.57704 6.07528 5.04575 9 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 10 3.13648 5.53101 3.38282 2.81597 4.92713 3.84610 3.94023 4.35481 2.02955 3.80345 4.58681 1.21061 4.23250 2.62203 2.15379 3.10153 2.88965 3.95532 5.88924 4.57504 10 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 11 3.61618 5.09968 5.17798 4.76722 3.76023 4.61038 5.32893 2.88476 4.53951 0.49435 3.59304 4.88888 5.05977 4.77102 4.64669 4.05873 2.33441 2.95521 5.76437 4.65815 11 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 12 3.35576 5.53890 3.08496 2.36254 5.34852 2.24555 4.58399 4.85147 3.56483 4.40582 5.25652 3.53542 0.69391 3.78198 4.04493 3.37458 3.74666 4.34625 6.53643 5.18368 12 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 13 2.22810 5.24478 2.77788 2.59028 4.54538 3.02379 3.83475 4.00077 2.02741 3.53118 2.87886 3.12971 2.67621 2.94794 2.83214 2.46222 2.79219 3.06740 5.70588 4.32392 13 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 14 4.40732 6.13443 4.65069 4.18723 5.80132 4.62222 4.89322 5.36526 0.19908 4.72612 5.72316 4.52196 5.12327 4.09310 3.29312 4.44081 4.62187 5.04611 6.46691 5.52034 14 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 15 2.88495 3.53243 3.14967 1.86171 4.64841 3.65858 3.84258 4.11130 1.77177 3.61489 4.37306 3.13855 4.05323 2.37460 3.02835 2.85979 2.00888 3.70338 5.76396 4.37849 15 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 16 4.30701 0.09939 5.78597 5.78880 5.78057 4.60281 6.26228 5.30866 5.71979 5.05499 6.23108 5.61859 5.34738 6.01386 5.62752 4.57132 4.84683 4.92806 6.78752 6.02713 16 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 17 2.02629 3.69696 3.36440 2.47526 4.12036 3.71902 3.94536 3.51590 2.79235 3.16105 4.00148 3.30243 3.01938 2.75117 3.23473 2.43517 2.11208 2.34734 5.44929 4.14745 17 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 18 2.53005 5.43086 2.36305 1.53950 4.77237 3.64041 2.83359 4.26096 2.18852 3.73378 4.47563 3.10519 4.05600 2.21577 3.10612 2.86727 3.14616 3.82021 5.86174 4.44419 18 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 19 4.30701 0.09939 5.78597 5.78880 5.78057 4.60281 6.26228 5.30866 5.71979 5.05499 6.23108 5.61859 5.34738 6.01386 5.62752 4.57132 4.84683 4.92806 6.78752 6.02713 19 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 20 4.38949 5.94766 5.23504 5.28096 6.20704 0.08360 6.20528 6.16857 5.57189 5.61653 6.67533 5.40393 5.34052 5.81933 5.59187 4.60390 4.93070 5.51304 6.92907 6.37624 20 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 21 2.94705 5.47257 2.62724 1.95637 4.81399 3.65144 3.88394 4.30432 1.47916 3.77443 4.51937 2.44163 4.07811 2.24346 3.13748 2.66162 3.18287 3.86226 5.90092 4.48006 21 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 22 2.85220 5.33823 2.45253 1.79722 4.67270 3.62697 2.67936 4.15149 2.13963 3.63890 3.32977 2.72848 4.02162 2.91710 3.04775 2.62194 3.08354 2.70919 5.77704 4.37214 22 - - 2.68620 4.42227 2.77522 2.73126 3.46356 2.40515 3.72497 3.29356 2.67743 2.69357 4.24519 2.90349 2.73742 3.18149 2.89803 2.37889 2.77522 2.98521 4.58479 3.61505 0.07803 2.63729 5.65380 0.28540 1.39316 0.48576 0.95510 23 3.94392 5.15654 5.91942 5.37731 3.73843 5.40466 5.82303 0.78195 5.24488 1.85536 1.72314 5.55403 5.50929 5.24787 5.26359 4.80649 4.17056 2.44795 5.92282 4.89299 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 24 2.85456 5.28818 2.19444 1.63074 4.60164 3.63662 3.09680 3.14194 2.58006 3.57984 3.55838 2.44102 4.03145 2.93810 3.06751 2.83181 3.08606 3.03241 5.73995 4.34801 25 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 25 3.60107 6.13478 2.80889 0.57850 5.45536 3.85600 4.35761 5.00306 3.22721 4.44808 5.32024 3.32919 4.47045 2.23490 3.69911 3.48166 3.88162 4.57421 6.54164 5.08749 26 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 26 3.02404 5.02248 3.56326 2.98211 4.20565 3.86904 4.02826 2.51129 2.32795 3.15958 3.17285 3.45231 4.24813 1.14602 3.06553 3.11419 3.24484 3.29200 5.52513 4.25812 27 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 27 1.80014 3.00309 3.43315 2.87559 4.03109 3.74713 2.07985 3.42556 2.84864 3.08752 3.94168 3.35719 4.13880 2.44012 3.27281 2.72199 3.09890 3.15415 5.38980 3.20047 28 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 28 3.77558 6.51847 1.81778 0.52261 5.79212 3.82611 4.49574 5.40281 3.67857 4.83498 5.75344 3.27617 4.52188 3.68379 4.39077 3.59224 4.09639 4.91837 6.94872 5.34776 29 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 29 1.52187 1.01731 5.00348 4.77306 5.08779 3.51265 5.38094 4.48077 4.65511 4.23120 5.04641 4.31522 4.35158 4.81263 4.74214 1.53340 3.32695 3.83045 6.48969 5.39373 30 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 30 4.84389 5.92210 5.29974 5.18540 2.55541 5.25081 2.73433 4.66707 4.93264 3.81258 5.16752 4.83284 5.58219 4.95450 4.92537 4.72722 5.06195 4.58879 4.22937 0.32758 31 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 31 2.50272 4.95763 3.31946 2.48749 2.57726 1.98279 3.33035 2.96866 2.47450 2.87957 4.03625 2.82768 4.09737 3.09417 3.20031 2.68890 3.08607 3.27484 5.47906 4.16621 32 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 32 2.88767 4.95941 3.36000 2.81499 4.16211 3.73451 3.18456 3.57291 2.77900 2.86778 3.36339 1.40666 4.13187 3.14142 3.20960 2.96003 2.06672 3.28204 5.48282 4.17160 33 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 33 2.85343 5.18569 3.18028 1.69853 4.46456 3.65692 3.38103 2.85319 2.28525 2.91826 4.24463 3.15689 4.04840 2.36362 3.09236 2.85358 2.37295 3.08655 5.65967 4.29390 34 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 34 4.30701 0.09939 5.78597 5.78880 5.78057 4.60281 6.26228 5.30866 5.71979 5.05499 6.23108 5.61859 5.34738 6.01386 5.62752 4.57132 4.84683 4.92806 6.78752 6.02713 35 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 35 2.29369 5.44485 1.80236 1.61536 4.77733 3.65018 3.89465 4.26076 2.66776 3.74785 4.50011 2.49693 4.08128 3.00244 3.17108 2.90232 2.85165 3.20867 5.88844 4.47086 36 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 36 2.86507 5.37960 2.15362 1.96495 4.72492 3.62683 3.82125 4.21198 1.91501 3.68454 4.42106 2.62133 3.18120 2.64940 2.54640 2.54205 3.09692 3.77054 5.81093 4.39817 37 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.01078 4.93145 5.65380 0.61958 0.77255 0.48576 0.95510 37 4.30701 0.09939 5.78597 5.78880 5.78057 4.60281 6.26228 5.30866 5.71979 5.05499 6.23108 5.61859 5.34738 6.01386 5.62752 4.57132 4.84683 4.92806 6.78752 6.02713 38 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00727 4.92794 * 0.61958 0.77255 0.00000 * //