# STOCKHOLM 1.0
#=GF ID   PAP2_C
#=GF AC   PF14360.1
#=GF DE   PAP2 superfamily C-terminal
#=GF AU   Coggill P
#=GF SE   Jackhmmer:Q56Y01
#=GF GA   27.00 27.00;
#=GF TC   27.00 27.00;
#=GF NC   26.90 26.90;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF DR   INTERPRO; IPR025749;
#=GF CC   This family is closely related to the C-terminal a region of
#=GF CC   PAP2.
#=GF SQ   54
#=GS A5K283_PLAVS/202-273  AC A5K283.1
#=GS Q4YWD8_PLABA/201-272  AC Q4YWD8.1
#=GS C6KT87_PLAF7/201-272  AC C6KT87.1
#=GS Q4YWD7_PLABA/163-234  AC Q4YWD7.1
#=GS B3L7G0_PLAKH/276-347  AC B3L7G0.1
#=GS C6KT86_PLAF7/265-336  AC C6KT86.1
#=GS A7ANZ4_BABBO/239-311  AC A7ANZ4.1
#=GS Q4N3L0_THEPA/182-253  AC Q4N3L0.1
#=GS Q56H32_THEAN/200-271  AC Q56H32.1
#=GS A3A7T0_ORYSJ/107-178  AC A3A7T0.1
#=GS A9RPY7_PHYPA/269-340  AC A9RPY7.1
#=GS A9S9I4_PHYPA/275-346  AC A9S9I4.1
#=GS B5YLZ6_THAPS/422-494  AC B5YLZ6.1
#=GS B7FUU7_PHATC/326-397  AC B7FUU7.1
#=GS B8C480_THAPS/431-503  AC B8C480.1
#=GS D0MWV3_PHYIT/192-264  AC D0MWV3.1
#=GS A9SUW6_PHYPA/174-246  AC A9SUW6.1
#=GS B9HC73_POPTR/172-244  AC B9HC73.1
#=GS Q56Y01_ARATH/172-244  AC Q56Y01.1
#=GS Q5N7A7_ORYSJ/172-244  AC Q5N7A7.1
#=GS D0NII4_PHYIT/164-244  AC D0NII4.1
#=GS C5LU78_PERM5/899-971  AC C5LU78.1
#=GS C5KN45_PERM5/142-213  AC C5KN45.1
#=GS C5L5L1_PERM5/146-217  AC C5L5L1.1
#=GS SMS2_CAEEL/201-274    AC Q20735.1
#=GS C3XQA8_BRAFL/273-346  AC C3XQA8.1
#=GS Q640R5_XENTR/274-347  AC Q640R5.1
#=GS A0JMN0_DANRE/269-342  AC A0JMN0.1
#=GS Q4TAV6_TETNG/269-342  AC Q4TAV6.1
#=GS Q28DN3_XENTR/220-293  AC Q28DN3.1
#=GS Q6DEI3_DANRE/232-307  AC Q6DEI3.1
#=GS Q4RJF4_TETNG/239-314  AC Q4RJF4.1
#=GS B3SD02_TRIAD/279-352  AC B3SD02.1
#=GS SAMD8_HUMAN/292-365   AC Q96LT4.2
#=GS SMSR1_CAEEL/321-394   AC Q20696.1
#=GS D2VDJ4_NAEGR/246-319  AC D2VDJ4.1
#=GS Q17C33_AEDAE/230-303  AC Q17C33.1
#=GS B7QHG5_IXOSC/233-306  AC B7QHG5.1
#=GS A8PZ90_BRUMA/218-295  AC A8PZ90.1
#=GS A8X0T5_CAEBR/264-337  AC A8X0T5.2
#=GS A8XDY1_CAEBR/127-200  AC A8XDY1.2
#=GS A8Q6Y2_BRUMA/210-283  AC A8Q6Y2.1
#=GS SMSR2_CAEEL/246-319   AC Q9TYV2.1
#=GS A2DHW8_TRIVA/46-124   AC A2DHW8.1
#=GS A2DN61_TRIVA/170-240  AC A2DN61.1
#=GS A2FIE9_TRIVA/168-238  AC A2FIE9.1
#=GS SLS_LEIMA/211-286     AC E9AFX2.1
#=GS SLS2_TRYB2/201-275    AC Q38E54.2
#=GS SLS11_TRYCC/193-267   AC Q4E4I4.1
#=GS C4LV27_ENTHI/184-261  AC C4LV27.1
#=GS C5KL60_PERM5/83-154   AC C5KL60.1
#=GS C5KY50_PERM5/57-128   AC C5KY50.1
#=GS D2VXN5_NAEGR/191-270  AC D2VXN5.1
#=GS D2VKR1_NAEGR/196-272  AC D2VKR1.1
A5K283_PLAVS/202-273             VCSDLIISGHSFSTTIFLLFALFY....VNSVV........LKTLITFLCFVIYAFIIVGFIHYTSDVLLG..FIFGIFIF.TFYHL
Q4YWD8_PLABA/201-272             VCSDLIVSGHSFTSTIFLLFIFCY....MDNVV........IKVITALLSCFVYSVLIVGFIHYTSDVLLG..ILFGFFIF.GLYHI
C6KT87_PLAF7/201-272             VCADLIVSGHSFSTTIFLMFSFYY....INNVI........IKFIIFTFSCFIYAIIIIGFIHYTSDVLLG..IIFGVFMF.SFYHI
Q4YWD7_PLABA/163-234             ECTDLIISGHTCFTTLFVFTWLYY....EKNLF........IKLIILLYSIYLYLLIIISRFHYTVDVLLG..IFFGSTIF.IFYHW
B3L7G0_PLAKH/276-347             ECTDLIISGHTAFTTVLKFFWMFY....EKKIY........IKAVLFLYCLFIYGMIVISRFHYTVDVLMG..YVFGSTVF.LFYHC
C6KT86_PLAF7/265-336             ECTDLVISGHTAFTTLLTFFWFFY....ERNIY........VKTTIFLYSIYIYIIIIISRFHYTVDVLMG..YVFGGSVF.LFYHY
A7ANZ4_BABBO/239-311             TCTDMIISGHTAGSISIMLMFVLH....NRQWY........LNTIIMIVAGIICFLLILTRAHYTIDIMFG..MLFALQIYSQHLRM
Q4N3L0_THEPA/182-253             PCTGVLFSGHVYFVILAFIILSQN....SGFL.........FNMTMFVYAALISVSIVASKYHYSIDAMFS..ILFAPFIYNVYFSS
Q56H32_THEAN/200-271             NCTDLIVSGHTMFTVITCILFVEN....AKYLI........TKLILVLYTGFVLFLIVACKYHYTVDVLLG..LSISILLH.FYYYS
A3A7T0_ORYSJ/107-178             GCSDLMYSGHMLVAVLTAMAWTEA....YGGW.........ISVVIWFLVLHSAQREIRERHHYSVDCIVA..IYVGILLWRMTGFI
A9RPY7_PHYPA/269-340             GCNDLMFSGHVFVAVLTAMAWQEA....YPGW.........TSTLIWLLVVHTAQREIRERHHYSVDVVTG..VYFGIFLWNTTGWI
A9S9I4_PHYPA/275-346             GCNDLVFSGHMYVAVLTAMAWQEA....YPGW.........GSVFIWFLVAHTGQREIRERHHYSVDVVSG..IYVGILMWRTTRWI
B5YLZ6_THAPS/422-494             GCNDLILSGHATVTSTLGCASTSV....ASNTR........FSMALWTLMALDYSIEAYQGLHYSVDMWLG..CIVTCLLWQLTKPL
B7FUU7_PHATC/326-397             GCNDLIISGHATVTSTLACVAVSA....HPSKV........FGGCLVCLLLLDYSVEIYEGFHYSVDMWLG..LVIVSLFW.KVFSF
B8C480_THAPS/431-503             GCGDLMFSSHTIYTMSFVCVVFKY....FNFKS........LKVIMALLQISIVPFILAARKHYSVDVFTA..LYVTPLVFELLWTR
D0MWV3_PHYIT/192-264             GCGDLMFSSHTIYTVSFILTVWKY....WPNKY........GISIMVLVQITIAFLIVASRKHYTLDVFSA..LYIVPLFWLALEAY
A9SUW6_PHYPA/174-246             GCGDLIFSSHMTFALTFFHSYVKY....GTRQW........MKFVAFLTMVALSLLIIASHKHYSVDIVVA..WFTVYFVFFYVDRR
B9HC73_POPTR/172-244             GCGDLIFSSHMIFTLVFVLTYQKC....GTKRC........IKQLGWLIAVVLSFLIIASRKHYTVDVVVA..WYTVNLVVFFLDKK
Q56Y01_ARATH/172-244             GCGDLIFSSHTIFTLVFVRTYQRY....GTRRW........IKHLAWLMAVIQSILIIASRKHYTVDIVVA..WYTVNLVMFYVDSK
Q5N7A7_ORYSJ/172-244             GCGDLIFSSHMIFTLVFVRTYHKY....GSKRL........IKILAWLMAIIQSLLIIASRKHYSVDVVVA..WYTVNLVVFFIDNK
D0NII4_PHYIT/164-244             SCGDHIFLGHIANTNSAVLLYLRT....LARNFAGRTASKIRRVCRMTCLMSFGALCIAGHKRHTVDVVLG..LIISTLVFFHFEHS
C5LU78_PERM5/899-971             GCGDLVFSSHMMYCLLATLVVTHY....SRSLV........LMVIEWLLCCALVCLILAQRSHYTLDVWVS..WYTVPMVWICFYHF
C5KN45_PERM5/142-213             GCSDLIYSGHMMYAILATCAIFRY....AQNWY........IKATCLALNILQGFVIVASRAHYSVDVIVA..AYTIPAFW.CTFAY
C5L5L1_PERM5/146-217             GCSDLIFSGHMLYVISITCALFRY....AEHWS........IKYFALVLNILQGFLIIASRRHNTVDVVVA..AYAVPCIW.CTFAY
SMS2_CAEEL/201-274               LCGDLMFSGHTVVLTIMYFVQLQY....TPRGLVI......LRYIAAPITFLGIAALVVSGGHYTMDVLIA..YWLTSHVF.WSYHQ
C3XQA8_BRAFL/273-346             LCGDYLFSGHTVILTITYLFIKEY....SPRGWFI......LHWCTWLVSCIGIFCILLAHDHYTIDVVVA..YFITTRLF.WIYHT
Q640R5_XENTR/274-347             LCGDYLYSGHTVMLTLTYMFIKEY....SSPRLWL......YHWICWFLSCVGIFCILLAHDHYTVDVVVA..YYITSRSF.WWYHT
A0JMN0_DANRE/269-342             MCGDYLYSGHTVMLTLTYLFIKEY....SPRRFWW......FHWGCWSLCAVGVFCILLAHDHYTIDVVVA..YFITTRLF.WWYHT
Q4TAV6_TETNG/269-342             MCGDFLYSGHTVMLTLSYLFIKEY....SPPWMWW......YHWSCWLLSASGVVCILVAHDHYSIDVLVG..YVATTRLF.WWYHT
Q28DN3_XENTR/220-293             LCGDFLYSGHTVILTLTYLFIKEY....SPRHFWW......YHLICWLLSAAGVICILVAHEHYTVDVIVA..YYVTTRLF.WWYHT
Q6DEI3_DANRE/232-307             MCGDFLYSGHTVMLTLTFLFIYEY....SPRSRLWT....VYHVICGLLSAMGMICILMGHEHYSLDVVVA..YYITSRLF.YWYHT
Q4RJF4_TETNG/239-314             LCGDFLYSGHTVMLTLTYLFIKEY....SPRSFWW......YHLICWMLSAVGVVCILVAHEHYSVDVVVAIFHHLPTLLV.VPHHG
B3SD02_TRIAD/279-352             TCGDYLFSGHTVAVTLSNFFITEY....TPDSWHL......LHFLTWTLNLSGIFFILAAHEHYSIDVLIG..YYITTRLF.IYYHA
SAMD8_HUMAN/292-365              TCGDYMFSGHTVVLTMLNFFVTEY....TPRSWNF......LHTLSWVLNLFGIFFILAAHEHYSIDVFIA..FYITTRLF.LYYHT
SMSR1_CAEEL/321-394              SCGDYMFSGHTTVITMISHFITEY....TPADWTG......LHTFTWVLNCFAIFLILAAHEHYSIDVFIA..FYISSRMF.LYYHA
D2VDJ4_NAEGR/246-319             TCGDYMFSGHMSMITILNYTINEY....TPKHWKG......LHIITWVLNCFGAFFVLAAHEHYSIDVFIG..FFISSRLF.VYYHD
Q17C33_AEDAE/230-303             YCGDYIYSGHTVTLVMGYLIIAEY....SPKKFWI......IHWLAWCASLTGVSMVLLAHGHYTVDVLIA..YYVTTRLF.WTYHT
B7QHG5_IXOSC/233-306             FCGDYIYSGHTVILTLAYLVVREY....SPQRCKV......VHITYLTLSCVGILMVLLSRGHYTVDVVIG..YYVTTRLF.WVYHT
A8PZ90_BRUMA/218-295             LCGDYIYSGHTVVLVTSCLFITESINLDSPQRWKP......LHFFSIMVSAAGVILLLISRAHYTIDVIIS..YWISTRVF.WTYHT
A8X0T5_CAEBR/264-337             LCGDYIYSGHTLVLVVSALFIGEY....SPRRFYI......LHWLSWLVCAVGVVFLVLSHGHYTIDVILS..YFACTRVF.WAYHT
A8XDY1_CAEBR/127-200             LCGDLLFSGHTLVMVTCSLAVAYY....LPKSIKP......LQWIAHVSCFVGMICMIISRTHYTIDVIIA..YWLSNMVF.RIYHA
A8Q6Y2_BRUMA/210-283             LCGDLLFSGHTLAMVVSSLTVAYY....LPDSFRP......LRYIPCMLSWVGMICMVISRTHYTIDVLFA..YWLSTAVF.SIYHA
SMSR2_CAEEL/246-319              LCGDLIVSGHTLTIFTAFLVFKTY....APQRLQP......LSHIYHVLAFTALFSILLARKHYMIDIVLG..YTVSTRIF.MEYHA
A2DHW8_TRIVA/46-124              QCGDLIVSGHTMFMWQSSRWIMET....TSRMLPTLG.STFVKLGSLYTFLIGICYITLSRNHYTIDIWFG..FLLSEGCY.YLYGL
A2DN61_TRIVA/170-240             TCGDMIYSGHTMGFMFPGLIHHRF....FNKK.........LGVLYLVLGFIGSFSLILTRFHYTVDVLLS..IILTTTMW.FTYNL
A2FIE9_TRIVA/168-238             TCGDMIFSGHTMGFIFPGLIHHHF....IGKI.........IGWIYLFVGVIGAFGLIVSRFHYTVDVLLS..LVLSPLLY.FAYNL
SLS_LEIMA/211-286                HCGDLMFSGHTMILSLAFILAWDY....SPFLHPW.....AVRVWVSVLLPISYYCILASRSHYTDDILVA..MYVMIATYKVIDHA
SLS2_TRYB2/201-275               HCGDLMYSGHTVILTLHLMFHWIY....GAMVHWS......FRPVVTVVAIFGYYCIVASRFHYTDDVLVA..IYLTIATFIAVGHN
SLS11_TRYCC/193-267              HCGDLMFSGHTVSITLSLLVQWIY....GSMLHWV......FRPASVLLVLLSFYSIIASRSHYTDDILVS..FYITVTTFLVLRHS
C4LV27_ENTHI/184-261             TCADLLFSGHTANLTLCAFIWEYY....SEKVPFFNP..LIERICAWIIAFIGYFIFLSNHFHYSCDVFIG..FIVASLLF.NLYHT
C5KL60_PERM5/83-154              TCADVFYSGHSIPITLSMMFWMDY....TASVQ........ERVFGSLLSVMALLIIVCTHFHYTLDVFYG..AGLTVIIW.RLYHF
C5KY50_PERM5/57-128              TCADVFYSGHSISVTLATMVWWDY....TSSIA........SRLFGLFWGLFTLLVIMSTHFHYTLDVVYG..VAVTFIAW.RLYHY
D2VXN5_NAEGR/191-270             TCGDYVFSGHATALILVFWFVWYY....SHSDRWSKAVRMIFNTILFTVTFVGCFLIIVAKEHYTVDVILG..VVISVMFC.ALYHM
D2VKR1_NAEGR/196-272             TCGDYVFSGHATSLSVVCWFVWYY....SNKEWVGR...IWTNLLLIILHIVGCLGILLAKEHYTVDVLLA..CTISLLVC.QLYHS
#=GC seq_cons                    tCGDllaSGHThhhslshhhhhcY....ssphh........h+hlhhllshhshhhIlhu+tHYTlDVllu..halsshla.hhYHt
//