HMMER3/b [3.0 | March 2010] NAME ECR1_N ACC PF14382.1 DESC Exosome complex exonuclease RRP4 N-terminal region LENG 39 ALPH amino RF no CS yes MAP yes DATE Thu Oct 4 14:27:00 2012 NSEQ 79 EFFN 15.251282 CKSUM 147071118 GA 27.00 27.00; TC 27.10 27.00; NC 26.90 26.90; BM hmmbuild HMM.ann SEED.ann SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq STATS LOCAL MSV -7.2351 0.71952 STATS LOCAL VITERBI -7.7423 0.71952 STATS LOCAL FORWARD -4.6631 0.71952 HMM A C D E F G H I K L M N P Q R S T V W Y m->m m->i m->d i->m i->i d->m d->d COMPO 2.67084 4.49742 3.22513 2.92283 3.55324 2.10358 3.77554 2.74303 3.10007 2.59258 3.92919 3.46525 3.10589 3.45794 3.13013 2.56768 2.66715 2.34281 5.80536 2.95331 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.00000 * 1 3.80766 5.17981 5.78643 5.17022 2.23656 4.97929 5.31385 1.29489 4.95193 1.67983 2.32522 5.14658 3.87907 5.08006 4.95483 3.45360 3.40792 1.90742 5.80259 3.74466 1 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 2 1.79448 2.55013 5.79088 5.17685 3.38587 4.99416 5.33172 3.19172 4.96189 3.38087 4.31470 5.15891 5.35766 5.09328 4.11106 4.30673 3.69519 0.69098 5.82370 3.48302 2 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 3 2.89041 3.81452 5.80834 5.19362 3.61735 5.00392 5.34122 1.97245 4.97671 1.78266 3.03738 5.17119 5.36605 5.10608 4.98080 3.95394 1.48573 1.46074 5.82954 4.65356 3 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 4 4.95812 6.77314 6.67497 6.74001 7.45379 5.51150 7.49829 7.19583 6.87167 6.76851 7.63941 6.40438 0.05349 7.03762 6.84362 5.17713 3.85773 6.29113 8.43978 7.71085 4 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 5 6.88894 7.95200 7.50752 7.59702 8.21687 0.00827 8.20341 8.50992 7.82551 7.67214 8.91294 7.76658 7.25135 8.08718 7.61981 7.17724 7.39760 7.93180 8.59191 8.45514 5 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 6 3.27985 6.18834 1.49945 1.38158 5.53307 4.44576 3.51307 5.01939 3.21033 4.11999 3.53247 3.91293 4.84155 1.56653 3.86604 3.40281 3.21805 4.57886 6.62088 5.20915 6 - - 2.68624 4.42231 2.77525 2.73129 3.46359 2.40518 3.72500 3.29360 2.67663 2.69360 4.24695 2.90352 2.73745 3.18152 2.89806 2.37892 2.77525 2.98524 4.58482 3.61509 0.03889 3.28867 7.08304 0.16804 1.86639 0.48576 0.95510 7 3.29243 5.21049 5.50983 4.91001 2.91816 4.93293 3.79914 2.27447 3.53296 1.94959 3.77503 5.01014 3.94118 4.04279 1.61418 3.32153 2.98741 1.49955 5.82797 4.64547 8 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 8 5.44647 6.55314 7.58214 7.10253 5.05028 7.21046 7.81512 1.60275 7.08972 0.44759 4.73116 7.40822 7.08915 6.92529 7.07035 6.73094 5.67166 2.07635 7.49946 6.59113 9 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 9 2.39143 2.04856 3.14548 3.55073 3.96106 1.28678 4.73773 4.52822 3.18721 4.13711 4.23357 4.06741 4.91982 3.89183 3.34440 2.62780 1.92381 4.20901 6.38687 5.05592 10 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 10 2.28707 6.17615 2.61689 2.66937 4.39909 4.43822 3.49395 4.40971 2.20003 3.28790 5.21671 3.35286 2.62558 3.46084 2.42358 1.98435 2.07109 3.32305 6.60860 5.19741 11 - E 2.68625 4.42232 2.77527 2.73130 3.46361 2.40520 3.72502 3.29286 2.67748 2.69331 4.24697 2.90354 2.73747 3.18154 2.89808 2.37894 2.77527 2.98476 4.58484 3.61510 0.05859 3.03694 4.71878 0.13805 2.04840 0.48576 0.95510 11 1.61744 6.14392 2.29915 2.29097 5.47761 3.95971 4.62696 2.36269 3.06306 3.67027 5.18758 3.20503 4.83189 2.99409 3.85704 1.98870 2.51056 3.33370 6.58347 4.01440 13 - T 2.68622 4.42229 2.77524 2.73127 3.46358 2.40517 3.72499 3.29358 2.67745 2.69359 4.24694 2.90351 2.73676 3.18151 2.89805 2.37891 2.77524 2.98523 4.58481 3.61507 0.04050 3.53225 4.56114 0.20223 1.69776 0.43596 1.04028 12 3.11534 6.17159 2.38200 1.80451 5.51801 3.15900 4.08559 5.00496 2.93853 4.03771 5.21190 2.89367 3.36400 2.98222 3.52683 1.29331 2.42095 4.56295 6.60345 5.19166 15 - T 2.68622 4.42229 2.77523 2.73127 3.46358 2.40517 3.72498 3.29358 2.67745 2.69359 4.24694 2.90351 2.73680 3.18150 2.89805 2.37891 2.77523 2.98522 4.58481 3.61507 0.04898 3.59397 3.89644 0.21144 1.65767 0.42816 1.05471 13 3.44860 6.16652 2.56313 1.03274 5.51285 2.40310 4.61249 4.99983 2.76523 4.47233 5.20691 3.53491 4.81888 2.37056 3.25501 2.51516 2.70089 4.02734 6.59838 5.18647 17 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00262 6.34123 7.06358 0.61958 0.77255 0.38196 1.14736 14 4.93694 6.20146 6.58302 6.16999 1.23024 5.93319 3.21247 3.95724 5.94727 2.00369 5.34169 3.90842 6.25783 5.89246 5.87388 5.27399 5.16045 3.35958 4.05821 0.91532 18 - S 2.68624 4.42231 2.77525 2.73129 3.46360 2.40519 3.72500 3.29360 2.67747 2.69317 4.24695 2.90298 2.73745 3.18152 2.89806 2.37893 2.77525 2.98524 4.58483 3.61509 0.04037 3.25111 7.08304 0.16330 1.89273 0.48576 0.95510 15 2.65547 5.24771 5.30094 4.71137 3.68080 4.89587 5.20238 2.59922 1.97350 2.17033 1.76012 4.89765 5.26467 3.07622 2.94505 3.15605 2.28937 2.31297 5.86046 4.15173 20 - E 2.68622 4.42229 2.77524 2.73127 3.46358 2.40517 3.72499 3.29358 2.67745 2.69359 4.24694 2.90351 2.73744 3.18150 2.89805 2.37891 2.77524 2.98440 4.58481 3.61507 0.02900 3.58459 7.08305 0.20865 1.66960 0.48576 0.95510 16 1.59269 4.46148 4.08002 3.52210 5.14830 4.51681 4.71948 4.56776 3.06051 3.07185 3.39851 3.43398 1.82872 3.36401 1.84175 2.05389 3.92020 3.38344 6.40501 5.06624 22 - E 2.68622 4.42229 2.77524 2.73127 3.46358 2.40470 3.72499 3.29358 2.67745 2.69359 4.24694 2.90351 2.73744 3.18150 2.89805 2.37891 2.77524 2.98522 4.58481 3.61507 0.02918 3.57832 7.08304 0.20773 1.67357 0.48576 0.95510 17 4.23294 6.12224 6.30029 6.31617 3.95367 0.13452 6.70917 6.19957 6.35558 4.11073 6.70688 5.76255 5.80201 6.42349 6.34691 3.25531 4.81882 5.44680 7.43432 5.93388 24 - - 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 18 3.29586 6.17790 3.20403 2.32336 5.52415 4.43786 1.71610 3.45505 1.93191 4.04547 4.43167 2.98670 2.00659 2.78009 2.39531 3.38822 3.44729 4.56917 6.60988 5.19823 25 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 19 4.90560 7.11384 3.70688 4.36643 6.67862 0.18669 6.12014 6.81106 5.42707 6.27872 7.22060 2.64057 5.91978 5.39591 6.04649 4.89022 5.36678 6.15426 4.10251 6.49141 26 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 20 2.01516 5.92622 6.57183 6.31775 5.82146 5.03061 6.71030 4.45004 6.13623 3.14291 5.72357 5.81459 5.80822 6.26258 6.13903 4.50940 0.34054 2.89939 7.46059 6.33486 27 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 21 6.59312 7.36319 7.22322 7.28275 2.70304 6.89011 2.30290 6.12460 7.03427 5.16647 6.60204 6.35266 7.12620 6.56546 6.74984 6.31629 4.16285 6.09688 5.44801 0.23647 28 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 22 2.42816 5.33322 3.45800 1.85219 3.56712 4.82023 5.10187 2.21566 2.94454 2.79100 3.58235 4.69079 5.19389 4.56273 4.56748 3.09178 3.29250 1.24439 5.93454 4.10856 29 - E 2.68615 4.42341 2.77399 2.72971 3.46470 2.40465 3.72610 3.29470 2.67857 2.69436 4.24806 2.90198 2.73766 3.18262 2.89703 2.37843 2.77636 2.98634 4.58593 3.61181 0.15656 1.93739 7.08305 1.58284 0.22990 0.48576 0.95510 23 2.96169 6.17747 2.35434 1.70591 4.41267 4.07563 2.69078 4.05697 2.22169 3.05269 5.21787 3.64803 4.83140 2.81228 1.96349 2.97611 2.60040 4.56864 6.60956 3.77606 36 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 24 3.11228 6.17817 1.39256 2.32422 4.08781 2.53275 3.48085 5.01121 2.35325 3.00336 5.21853 1.87509 4.83153 2.87816 3.49772 3.45727 3.61922 4.56944 6.61015 5.19847 37 - T 2.68630 4.42237 2.77531 2.73135 3.46366 2.40524 3.72506 3.29048 2.67752 2.69367 4.24701 2.90358 2.73751 3.18158 2.89812 2.37898 2.77531 2.98530 4.58489 3.61515 0.07906 2.58794 7.08304 0.09493 2.40171 0.48576 0.95510 25 3.01864 6.17938 2.29898 2.22422 3.49552 1.26065 3.84467 5.01268 2.62890 4.48521 5.21973 2.66456 4.83213 2.86590 2.81701 2.55084 3.89671 4.57072 6.61126 5.19944 39 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 26 3.66616 3.17011 3.48309 2.34033 3.36416 4.09395 2.89329 3.39968 2.42651 4.45650 4.28304 2.18309 4.83660 2.92611 2.62934 2.65176 3.05960 3.57491 6.59324 1.84233 40 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 27 5.04266 6.18394 7.24658 6.83419 5.61944 6.86239 7.87594 0.67301 6.85669 1.65629 5.27833 7.03792 6.99293 7.14043 7.07054 6.36452 4.01510 1.37531 7.98150 6.75522 41 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 28 3.79968 3.06324 5.67783 5.06804 2.26147 4.95936 2.94138 2.40998 2.70905 3.14482 4.30631 5.09302 5.32386 5.01830 2.60057 4.26695 3.75790 2.44706 5.80722 1.12264 42 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 29 0.55913 6.05448 6.62375 6.68674 7.03852 4.84936 7.15142 6.58653 6.61604 6.27850 6.98814 5.81322 5.74216 6.62557 6.51639 0.95213 4.74495 5.54629 8.36483 7.40302 43 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 30 2.71095 4.54144 4.29673 4.78988 5.25758 4.08788 5.64110 3.88000 4.73322 3.45925 5.22443 4.99108 5.39631 5.00326 5.03151 0.39544 2.38166 4.31121 6.69818 5.49272 44 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 31 3.47186 5.32645 5.95873 5.34988 3.91106 5.16776 5.51395 1.72321 5.13949 1.20051 3.32645 5.33556 5.51798 5.26503 5.14521 4.48532 3.41463 1.18134 5.98589 3.43224 45 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 32 1.40302 5.24283 5.32555 4.73488 4.34388 2.99121 5.20872 3.38408 3.76972 2.03339 3.36715 4.91147 3.37082 4.80992 4.17559 2.29946 1.96321 2.29889 5.85621 3.35253 46 - S 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 33 6.88894 7.95200 7.50752 7.59702 8.21687 0.00827 8.20341 8.50992 7.82551 7.67214 8.91294 7.76658 7.25135 8.08718 7.61981 7.17724 7.39760 7.93180 8.59191 8.45514 47 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 34 3.68979 5.88656 3.39572 3.19427 2.48226 4.52224 3.80835 2.93364 2.55205 2.58562 4.95757 3.50579 2.74291 3.57125 2.69518 2.50884 2.22306 1.78770 6.39006 3.96823 48 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 35 3.03286 4.42590 5.66737 4.15106 4.28148 4.95697 5.28544 2.47490 3.26585 2.29468 3.02183 5.08779 5.32160 4.04416 2.55473 3.77230 4.03034 0.79709 4.17104 4.62998 49 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 36 3.41824 6.17688 2.79178 2.52999 4.13118 4.43805 2.61500 2.98985 2.02709 4.48247 5.21735 2.67041 4.83154 2.30995 1.95636 2.41414 2.92126 3.00745 6.60913 4.38376 50 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00790 6.36070 5.09256 0.61958 0.77255 0.48576 0.95510 37 3.57755 5.18493 5.65309 5.04472 3.53544 4.95125 3.64872 1.44976 4.15198 2.67591 2.79191 5.07879 5.31599 2.89049 2.24967 3.92497 2.27770 1.62577 5.80505 3.93255 51 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00258 6.35538 7.07773 0.61958 0.77255 0.45189 1.01177 38 3.46413 6.09927 2.16117 2.81164 5.41152 4.45760 4.14050 3.06292 2.74970 2.29874 5.14870 2.93202 4.85023 3.39663 2.85980 2.34953 3.26814 1.55725 6.55211 3.10591 52 - E 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00257 6.36070 7.08304 0.61958 0.77255 0.48576 0.95510 39 2.86711 6.17836 2.83914 2.74432 5.52482 3.27185 3.99027 4.18113 2.05227 4.48423 5.21866 1.54366 2.37877 2.65526 3.08169 2.39781 2.70486 4.56974 6.61022 5.19843 53 - T 2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503 0.00173 6.35986 * 0.61958 0.77255 0.00000 * //