# STOCKHOLM 1.0
#=GF ID   OHA
#=GF AC   PF14418.1
#=GF DE   OST-HTH Associated domain
#=GF AU   Anantharaman V
#=GF SE   Manual
#=GF GA   25.00 25.00;
#=GF TC   25.40 26.60;
#=GF NC   24.40 24.10;
#=GF BM   hmmbuild HMM.ann SEED.ann
#=GF SM   hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq
#=GF TP   Domain
#=GF RN   [1]
#=GF RM   20302647
#=GF RT   OST-HTH: a novel predicted RNA-binding domain.
#=GF RA   Anantharaman V, Zhang D, Aravind L;
#=GF RL   Biol Direct. 2010;5:13.
#=GF DR   INTERPRO; IPR025677;
#=GF CC   OHA occurs with OST-HTH [1]. 
#=GF SQ   28
#=GS A7AM25_BABBO/296-372    AC A7AM25.1
#=GS Q4MYP5_THEPA/84-160     AC Q4MYP5.1
#=GS Q4UAZ9_THEAN/549-625    AC Q4UAZ9.1
#=GS Q4UDI5_THEAN/223-300    AC Q4UDI5.1
#=GS Q4N612_THEPA/223-300    AC Q4N612.1
#=GS A7APU5_BABBO/184-263    AC A7APU5.1
#=GS Q8IL81_PLAF7/333-408    AC Q8IL81.1
#=GS F0ZW89_DICPU/918-989    AC F0ZW89.1
#=GS Q55DB7_DICDI/866-937    AC Q55DB7.1
#=GS A0CT46_PARTE/414-492    AC A0CT46.1
#=GS A0C728_PARTE/298-372    AC A0C728.1
#=GS A0C9T6_PARTE/260-336    AC A0C9T6.1
#=GS A0DGV8_PARTE/295-371    AC A0DGV8.1
#=GS B6AH92_CRYMR/169-246    AC B6AH92.1
#=GS B6AHN0_CRYMR/236-313    AC B6AHN0.1
#=GS A3FPM0_CRYPI/180-257    AC A3FPM0.1
#=GS B6KG44_TOXGO/140-217    AC B6KG44.1
#=GS Q8ILP9_PLAF7/1288-1365  AC Q8ILP9.1
#=GS C5LI01_PERM5/107-184    AC C5LI01.1
#=GS C5K6K7_PERM5/224-303    AC C5K6K7.1
#=GS Q9M1Q4_ARATH/594-667    AC Q9M1Q4.1
#=GS Q9FIC2_ARATH/618-694    AC Q9FIC2.1
#=GS Q8RX61_ARATH/553-629    AC Q8RX61.1
#=GS B9PU81_TOXGO/141-212    AC B9PU81.1
#=GS A7AT00_BABBO/350-423    AC A7AT00.1
#=GS Q4U9I2_THEAN/472-548    AC Q4U9I2.1
#=GS Q4N273_THEPA/473-549    AC Q4N273.1
#=GS Q8ILF3_PLAF7/821-897    AC Q8ILF3.1
A7AM25_BABBO/296-372               NEASEGLVSFT..GGRYAFAERLRE.EVHAFRSMRLGEVVHLVQLAIY.TGVFV.YAQR.ILLP...VTACEKTAEEMFPRMKKAR
Q4MYP5_THEPA/84-160                NDKVKDDKDFN..GGRYAFAERLKN.EVEAFRDMRLGEVVHLVQLAIY.SGIFV.YTQR.ILLP...VSACEKTAQELFPKLKKSR
Q4UAZ9_THEAN/549-625               NDKVKDDKDFN..GGRYAFAERLKN.EVEAFKNMRLGEVVHLVQLAIY.SGIFV.YTQR.ILLP...VSACEKTAQELFPKLKKSR
Q4UDI5_THEAN/223-300               .TIIPVEDIFNI.GGRYVFAEHLKKNGPKEFRNLSLGTIVNVVQKLNE.MGLLV.YRGN.CLVP...VVTSKMAANKFNNAVNKMN
Q4N612_THEPA/223-300               .SIVPVEDIFNV.GGRYVFAEHLKKNGPKEFRNLSLGTIVKVVQKLNE.MGLLV.YRGN.CLVP...VVTSKSAANKFNNNATNRL
A7APU5_BABBO/184-263               KHDVNISHDIRNVGGRYLFADHLRKTGPERFRSLPLGKVVRIVQDALD.SKILS.YDGN.NVVP...VVSSMSTANKIISRMQMMK
Q8IL81_PLAF7/333-408               ..LQSNDNNHK..GGRYILAETLKHTGPYIFRTMKLGRIIHILQKCID.LNILS.YFNN.NIIP...IFTSMSISKTYVSKLHVNE
F0ZW89_DICPU/918-989               .......PISR..NGRYGFATFLKESGPNEIREMPLAVITSMVELAFK.KKLLT.YKNC.NVFSN..MEVFVGEINSTSEVSANDG
Q55DB7_DICDI/866-937               .......PISR..NGRYGFATFLKESGPNEIREMPLAVITSMVELAFK.KKILT.YKNC.NVSSNIEELMFCESSSSIIDIIPD..
A0CT46_PARTE/414-492               KPPKSIQKAIP..GGKYGCAQLLKCCGPLELRVCSLGVLCLMIQEAIN.RNVLI.YYKT.LLIK..PNTNIAFDFNDFLNIFDDQF
A0C728_PARTE/298-372               ...QNDYQFFK..DGGYGCAQFIKLFGPKNLRELSLARLKLYTHMAIN.KHYIR.NTKK.VQYN...REKSEYATDDSQDRDNNIK
A0C9T6_PARTE/260-336               .TNAQNNKILK..GGRYGCAQFIKLLGPKKLRDLSLGRLTLYVQMAVN.KNYIR.YNKT.ILIQES.REKSEHTTDSSVDGDPQ..
A0DGV8_PARTE/295-371               .TNAQNNKILK..GGRYGCAQFIKLLGPKKLRELSLGRLTLYVQMAVN.KNYIR.YNKT.ILIQES.REKSEHTTDSSVDGDPQ..
B6AH92_CRYMR/169-246               QGNTLKTYQFK..GGRYGFAVELYEKALPFLDGYSLGSICHIVQLAIW.KGILR.YENN.ILQP...AAACWDVSSVCTSGFFNKS
B6AHN0_CRYMR/236-313               VTPILMRYQFK..GGRYGVAIEIHKANIPELKDLSVGQICHLVQLAIS.KGILQ.YENN.VLQP...RCTCLKIAAAVLALDIEKD
A3FPM0_CRYPI/180-257               IEPDLLRYQFK..GGRYGVAMEIHKAKISQLEDLSLGELSHLVQLAIN.GGILQ.YENN.VLKP...RCTCVKIAAAALSMDVDQI
B6KG44_TOXGO/140-217               .LLSSAPNGIG..GGRYGLAKYLQQLGLPFFKGFSLGQLCHVVQLAIS.HKFLLAYEDN.VLKP...VTACAVFANALLGLPDAKR
Q8ILP9_PLAF7/1288-1365             KSEDATLYTFS..GGRYGMAKELKKRNLPFFQGLFLGQLCHIVHISTN.KKIIA.YENN.YLKP...ISQCHKYTSAKKGIINGDE
C5LI01_PERM5/107-184               .LYDPSFYTFP..GGRYGTARALKERNLRFLNGYSLGELCHIVQLAID.KEILA.YGKSGSVVP...FKVSSKAEKDANARDKKPT
C5K6K7_PERM5/224-303               QNGRRDLYIFP..KGRYSCAHALEARKLPFFNGLTMGHLINVVQLAMSKYNLLMFDEDK.SIRP...PQAAQKVIRSQQRKPSEDS
Q9M1Q4_ARATH/594-667               ....SGRVEFTATTCRYEAAQVLKKE...CLKEFTLGDILQILNITAT.TKKWITHHQT.GWKP...ITISLAAETTNETATEADP
Q9FIC2_ARATH/618-694               ....RGFAIVSHSRTREVMAKNVQEEGPSCLRLLDESSMLHLVTLLIS.EKKWIEETPS.SSLP...FRIIKGSSPGHRHASNGLS
Q8RX61_ARATH/553-629               ....RGFVAVSHSRSRETMAKNLKEEGPSSLKPLDVPKMLDLISMLIS.EKKWIQENPS.DALP...FRVTRFTEESSCRSNPRTT
B9PU81_TOXGO/141-212               HELNDPKIVLP....PYSSEETSNVDDSSHCENLPTSSLAMVPFTANL.FRKLR......KLLR...QARQQDQAQCFVAASDGAT
A7AT00_BABBO/350-423               NNPDQTMPVFP..GSIYGTAKVFQKLELPFFEGMTLGTLCHIVQLAVR.VRKYLMYELK.TLKP...NLLSILQAC.....IKRTK
Q4U9I2_THEAN/472-548               ..DEHGNEYFP..GSIYGMSRTMQDHNLPFLEGMSLGTICHIIQLAIR.LKKYLVYDMK.TLKP...SESVRTGQFTPIPEDAEET
Q4N273_THEPA/473-549               ..DEHGNEYFP..GSIYGMSRTMQEHNLPFLEGMSLGTICHIIQLAIR.LKKYLVYDMK.TLKP...SESVRSGQFIPIPEAVEEN
Q8ILF3_PLAF7/821-897               DTTNM.FDIFN..NDIYEVADILKKKNFPILKDYSLGKIAHIIYLCLY.NGLLL.EENQ.KIIP...ACSSKNIISSIFYIKNKNS
#=GC seq_cons                      ...tps.hhFs..GGRYuhActL+cps..th+shoLGpls+lVQlAlp.ppllh.Ypps.sLhP...hpssppsssshhstssppp
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