# STOCKHOLM 1.0 #=GF ID Pput2613-deam #=GF AC PF14427.1 #=GF DE Pput_2613-like deaminase #=GF PI Pput2613-DEAM; #=GF AU Iyer LM, Zhang D, Aravind L #=GF SE Manual #=GF GA 25.00 25.00; #=GF TC 28.40 54.70; #=GF NC 22.70 17.50; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF RN [1] #=GF RM 21890906 #=GF RT Evolution of the deaminase fold and multiple origins of #=GF RT eukaryotic editing and mutagenic nucleic acid deaminases from #=GF RT bacterial toxin systems. #=GF RA Iyer LM, Zhang D, Rogozin IB, Aravind L; #=GF RL Nucleic Acids Res. 2011; [Epub ahead of print] #=GF CC A member of the nucleic acid/nucleotide deaminase superfamily #=GF CC prototyped by Pseudomonas Pput_2613 [1]. Members of this family #=GF CC are predicted to function as toxins in bacterial polymorphic #=GF CC toxin systems [1]. #=GF SQ 4 #=GS Q1IFR6_PSEE4/1444-1560 AC Q1IFR6.1 #=GS E8UEW4_TAYEM/1942-2060 AC E8UEW4.1 #=GS A5W3N8_PSEP1/740-859 AC A5W3N8.1 #=GS A6CFF1_9PLAN/10471-10587 AC A6CFF1.1 Q1IFR6_PSEE4/1444-1560 KF.GSGKGV.HTAVVNVHDSDGEHTVVSCILHSGNMTEEERALGFPRSSLATHTEARAVKQIPLQQ....GDVMVIDGQYPPCPSCKGKMNRASTETGAKIQYTWPENGE..TKTWTAGQKRRRR E8UEW4_TAYEM/1942-2060 KFSNGKRRPPHKATVTVTDKNGVVKHKSNLV.SGNMTEAEKKLGFPNNSLATHTENRATRLIDLNQ....GDTMLIEGQYRPCPRCKGAMRVKAEESGAKVIYTWPEDGDLKKREW.EGTPCDKK A5W3N8_PSEP1/740-859 SF.GSGKGT.HNAIATLYDSSGNVKATGIWQ.SGNMTPDEAALGFPKSTLATHTEARITRELSPQAVP..GDRLVIEGEYPPCNSCKGKMNAFKGSTGADVEYRWASGDGTTTEVWNAKSKRTQK A6CFF1_9PLAN/10471-10587 NY.ASSEG..HYAEWELRDPSGKLIARDIET.SGTDFSNPGKLTFPEQSWYAHTEGKIISDLYDSNLLQPGRFLNIDGILAPCSHCRGIMRWASQKFNMTIQYLGENG....ATIYKNGKIHDPN #=GC seq_cons pF.uSu+Gs.HpAhsslpDssGplpspuhhh.SGNMTpsEttLGFPcsSLATHTEuRhs+pls.pp....GDhhlI-GpYsPCspCKGtMphtupcoGAclpYpWspsst..schWpsGph+cp+ //