# STOCKHOLM 1.0 #=GF ID PT-TG #=GF AC PF14449.1 #=GF DE Pre-toxin TG #=GF AU Zhang D, Iyer LM, Aravind L, Eberhardt R #=GF SE Zhang D, Iyer LM, Aravind L #=GF GA 23.50 23.50; #=GF TC 23.50 23.60; #=GF NC 23.40 23.40; #=GF BM hmmbuild HMM.ann SEED.ann #=GF SM hmmsearch -Z 23193494 -E 1000 --cpu 4 HMM pfamseq #=GF TP Family #=GF RN [1] #=GF RM 21306995 #=GF RT A novel immunity system for bacterial nucleic acid degrading #=GF RT toxins and its recruitment in various eukaryotic and DNA viral #=GF RT systems. #=GF RA Zhang D, Iyer LM, Aravind L; #=GF RL Nucleic Acids Res. 2011;39:4532-4552. #=GF CC PT-TG is a conserved region found in many bacterial toxin #=GF CC proteins. It could function as a linker that links N-terminal #=GF CC secretion-related domain and C-terminal toxin domain. It #=GF CC contains a TG motif [1]. #=GF SQ 37 #=GS C5D4L3_GEOSW/87-166 AC C5D4L3.1 #=GS YQCG_BACSU/254-329 AC P45942.1 #=GS Q633D6_BACCZ/96-174 AC Q633D6.1 #=GS C3GF60_BACTU/70-148 AC C3GF60.1 #=GS C2YX61_BACCE/122-200 AC C2YX61.1 #=GS C2X396_BACCE/233-311 AC C2X396.1 #=GS A0AFZ4_LISW6/255-330 AC A0AFZ4.1 #=GS D2ENE8_9STRE/80-158 AC D2ENE8.1 #=GS D7UUF6_LISGR/264-335 AC D7UUF6.1 #=GS C8X5D4_DESRD/228-305 AC C8X5D4.1 #=GS C3AW80_BACMY/276-350 AC C3AW80.1 #=GS Q9KAE6_BACHD/24-98 AC Q9KAE6.1 #=GS D3FRB0_BACPE/313-393 AC D3FRB0.1 #=GS D3G073_BACPE/302-372 AC D3G073.1 #=GS F2JRK0_CELLD/1216-1284 AC F2JRK0.1 #=GS C3AFQ9_BACMY/88-168 AC C3AFQ9.1 #=GS C3I390_BACTU/11-91 AC C3I390.1 #=GS A7GMF2_BACCN/102-182 AC A7GMF2.1 #=GS C3AEI4_BACMY/45-125 AC C3AEI4.1 #=GS A1BYS3_BACCE/939-1019 AC A1BYS3.1 #=GS C3GIL3_BACTU/53-134 AC C3GIL3.1 #=GS C3HPW6_BACTU/106-187 AC C3HPW6.1 #=GS Q82CQ1_STRAW/313-385 AC Q82CQ1.1 #=GS B5GTK9_STRCL/294-362 AC B5GTK9.1 #=GS B0LUB6_9ACTO/309-377 AC B0LUB6.1 #=GS D5UI68_CELFN/58-135 AC D5UI68.1 #=GS B7WWR7_COMTE/4319-4403 AC B7WWR7.1 #=GS Q6ML42_BDEBA/272-348 AC Q6ML42.1 #=GS C2TFY3_BACCE/69-146 AC C2TFY3.1 #=GS Q65M71_BACLD/374-449 AC Q65M71.1 #=GS Q65EU5_BACLD/306-381 AC Q65EU5.1 #=GS E5W4J0_9BACI/314-388 AC E5W4J0.1 #=GS YXID_BACSU/327-400 AC P42296.2 #=GS A8FIJ2_BACP2/324-398 AC A8FIJ2.1 #=GS A8FFY0_BACP2/319-393 AC A8FFY0.1 #=GS A5A675_BACLD/36-110 AC A5A675.1 #=GS B4AJF8_BACPU/372-446 AC B4AJF8.1 C5D4L3_GEOSW/87-166 DQTLAENMKEFGL.ELLGWYDLQRLFGEYD.PITGERI.SGWDRLLAGGMLLASF.IPL.IKGIGIAGKVGIKGA....KSARITADVS YQCG_BACSU/254-329 YEKSWDAVCNFTG.EVSGYYDYKRAADGVD.PVTGEKL.TAGQRVAAGAMAAAGY.IPI.VGWAGKLAKGG........KAVYSTSKAL Q633D6_BACCZ/96-174 DRINAKMGMDIVG.ELSGAYDATRAVDGVD.PSTGEKV.GWFDRSVAGVMVVGSM.LQ..VGKLGKIPKVAKAAD....KANEAKKELE C3GF60_BACTU/70-148 GFDGKKLARDIAG.EVSGEYDVRRAWDGID.PSTGEKL.STWDRIFAGGMAVAGL.TP..VGKIAKVGKGVKMTA....KAAEAANTAK C2YX61_BACCE/122-200 GESLEKVTRDLVG.ELSGEYDVRRVIEGVD.PDTGEKL.SWWERTGAGVMVFAGL.TP..VGKGIKVVKGAKKVS....NAIDAAATLE C2X396_BACCE/233-311 TNDLKKAARDLTG.ELSGEYDVRRVMEGVD.PDTGKKL.SWWERTGAGVMVFAGL.TP..VGKGIKLLKGGKKVA....TATKNLLRSD A0AFZ4_LISW6/255-330 IKSDIKTLLHLGG.EFVLVNDIYRLVNGKD.WLSGEEE....NRAEAAGWLTLSA.LP..VSKLAQIAKELKAGN....RALKGVALSE D2ENE8_9STRE/80-158 NQENKAKLPTLAA.EFIGWNNGERLVTGKD.PLTGEDANRWAAGAELAVDIASNF.FP..IAKAGKL.RKLEKAL....DAVDAVNDAS D7UUF6_LISGR/264-335 MEGNTGAIVD....LIDPTQDVLRFFMGRD.PLTDNKL.SKTERGMALL....FL.FP..FAKVGKTFKFAFRGV....EDVERLGKFG C8X5D4_DESRD/228-305 EQELVARTAELVP.LVGEAMDILAATQGRD..LNGQEL.TTWDRLLRGIMLL....TPEVVGQVGRRYPEALPHL...MKGLQSLAAPE C3AW80_BACMY/276-350 KRETLALIIDFTP.IIGNIKAGGDVLVGRD.LVRGNKL.TGVDYVLATASIVAGG.EVRAIGKGGVKIK..........NALSEIPTVK Q9KAE6_BACHD/24-98 PLQTVSAVLDFLP.FVGNAKAGQEAASGVN.MITEEEL.DEWDRAIAAASVVLGG.....VGKIGGQALKNIL......RGSDDIPDAL D3FRB0_BACPE/313-393 SREISSAILDFTP.ILGNVKAGYEATHGVD.PITKREL.EDWEQTLMIAAVLGGG.....FVKAGVRGTRGVKSVGFTGKENFNRKEAL D3G073_BACPE/302-372 SREIGSTVLDFTP.IVGNIKAGVEATRGVD.PITKREL.EDWEKYFAAAGILAGG.....FAKLGSKAV..........KGVKGIDQAN F2JRK0_CELLD/1216-1284 PGDGLSLVLDLTP.LIGDAKTFIELIEGRD.IITKQEI....NRWLLAGAII....VPRVVSEAIGLFG..........KNADDVAKYI C3AFQ9_BACMY/88-168 TNELGSMSFDFIP.VIGQIKQGLQLINGKE.YFTDREY.DKNDYVWGTVSTVFGG.APKVIGRVFGKYGELEQKA....KDLGKVSKVT C3I390_BACTU/11-91 TTKFMNASLDVWP.IINVPKEIIQLVQGHE.MGEKDKY.KLSDYAIGVASVLTGG.TVKTIGKVVGTVEDIEKKA....KNLERAAKFT A7GMF2_BACCN/102-182 TNEQISFMLDITP.GVGAIKEGTQMIMGKN.PLTKEQY.GLDDYAWGTLAVVSGG.TSKVVGRVFGKVGDLEKKA....NNLEKAAKNI C3AEI4_BACMY/45-125 NDGDLSFVLGMTP.IVGTGIEIGQLIKGEN.LVTGQKY.GPEDYEWGTLSVVSGG.TSRVVGKIVGKIGDLEKKG....KAIENATKGT A1BYS3_BACCE/939-1019 NDGDVSFILGITP.IIGTGKEIGQLIKGED.LVTGQKY.GPDDYAWGTLAVVSGG.TTRVIGKVVGKVGDLEKKG....KALEAAAKNT C3GIL3_BACTU/53-134 EKSTIKKVWD.GI.VEGTGQAVEDTVEGFKALGKWETWENMGNAALHPIDTLSTM.....YNVLSDSFINDVINGDAESRAKWGSYALT C3HPW6_BACTU/106-187 QKSDLEKAWD.GL.YDGAGKGVGDAWEGFKALGDGETWSDMWDTVVNYDETLPAM.....WNAFSDSFMNDVWHGDVESGFRWGSYLVT Q82CQ1_STRAW/313-385 QERRMSMLLNLLP.GIGDGKGVIEAITGTD.LATGEKV.SSTDRVLGSLAVMRWL.......KYGGKLLPEDI......RAARKGDKVP B5GTK9_STRCL/294-362 QDRRMSLLLGLIP.GIGDGKGVVEAITGKD.LATGEKL.DAYDRATGSLFVLRWI.......KAGGKAL..........KPDDIRKDKS B0LUB6_9ACTO/309-377 QQRRMGLLLDLLP.GIGDGKGIIEAVTGTD.LATGDEL.TGFDRATGALVVMRWL.......KAGEKAL..........NADDIRNARK D5UI68_CELFN/58-135 LLAVLSMVLDFVP.GVGTVKGIVEAGTGRD.LLTGQEL.EPWERALGVLPLVGGLAAVAGLSRIGRAGRGA........RMPGEGTRYP B7WWR7_COMTE/4319-4403 AQELAQLMLELAP.FYGTGESALQLITGKS.SLTGEEA.SRFWAAIGVVPVAGGV.LKKAGEASVSEILKVFKSLHSAEGSINSAVAIE Q6ML42_BDEBA/272-348 SEVFADLSVGLDP.ITGPLRDVYEAFTGKN.LITGDTL.DSFDRTFAVVGALSFG.....FGSKIGKGLKIFNKI....KNLDFIKAAA C2TFY3_BACCE/69-146 EKSWWEKGIEGAA.EFIGVNDAIRAVTGKD.PITGKEL.STKERLIAAGWTLLNF.VP..VGKVASLAGKGIKYV.....ASSFGKTIV Q65M71_BACLD/374-449 PLEPVNDIGDFVAKEIAGGNDAVRVITGRD.PDTGEKV.SNVERAASGT....SL.TP..VGRLLKYGKKGFKLF....KGEEAGKKVA Q65EU5_BACLD/306-381 EKSDFNKNFDTAM.EFTGVYDAVRAAFGYD.LATGEIVKGNGDRLMAGL....SV.TP..FGKAFKYGKRGFKLF....KGEEAGKKLA E5W4J0_9BACI/314-388 EVSDLEKYSRIGL.ELLGESDFERAALGYD.PDTYKKL.SLFERFEAAV....NL.TP..PLRIVKWIRKGDKLA....KVSKVDKGAK YXID_BACSU/327-400 DENGYVKILETAV.ELTGVYDLFKAATGRD.PVSGEKV.TGKDRVVASI....NS.VP..FAKIAKLEK.LIDIN....KLINNGKKAK A8FIJ2_BACP2/324-398 TGDQPQNILNTAV.EFTGINDAIRVITGRD.PITGDKV.ANMDRLVSGV....YM.VP..STNIVKVGKYVFKII....KGEKVAKRVE A8FFY0_BACP2/319-393 DLKQTSNILYTAV.EFTGINDAIRVITGRD.PVTGDKV.ADMDRLVSSL....YM.IP..GAKIAKVGKYVFKIM....KGEKGSKKIV A5A675_BACLD/36-110 IEKALDWAKDTVG.ELSGGYDGYRAITGVD.PVTGEKL.TVTDRILSGV....SV.IP..ATKVVKVGKYAFKAT....KGAKTAKRVS B4AJF8_BACPU/372-446 DGEVVSTAENIIL.EYSGIYDGYRAVTGKD.PETSQNI.SRTDQVLSVA....SI.IP..IAKIVKVGKYVFKMD....QGKNAVKRVT #=GC seq_cons pppthshhh-hss..lushp-shcshpGpD..hTG-cl.shh-Rshuul.hh.uh.hs..huKlsphstth.thh....+uhcsstcsp //