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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
L-fibroin PF05849 Family 5 31 225.20 41 90.96 Changed Fibroin light chain (L-fibroin)
L1R_F9L PF02442 Family 32 163 198.30 32 74.57 Changed Lipid membrane protein of large eukaryotic DNA viruses
L27 PF02828 Family 20 1179 53.10 24 14.32 Changed L27 domain
L27_1 PF09058 Domain 4 147 59.10 57 8.95 Changed L27_1
L27_2 PF09045 Domain 3 113 57.80 61 3.30 Changed L27_2
L27_N PF09060 Domain 4 63 48.90 65 7.50 Changed L27_N
L31 PF09784 Family 10 125 106.30 53 91.26 Changed Mitochondrial ribosomal protein L31
L51_S25_CI-B8 PF05047 Domain 67 788 54.90 25 38.29 Changed Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain
L6_membrane PF05805 Family 8 302 186.50 40 95.13 Changed L6 membrane protein
L71 PF02448 Family 10 105 71.40 36 65.23 Changed L71 family
La PF05383 Domain 33 1403 58.80 37 10.47 Changed La domain
LA-virus_coat PF09220 Domain 2 18 311.60 31 49.63 Changed L-A virus, major coat protein
LAB_N PF07578 Family 10 310 71.50 40 47.27 Changed Lipid A Biosynthesis N-terminal domain
LacAB_rpiB PF02502 Family 170 5002 140.00 34 86.39 Changed Ribose/Galactose Isomerase
LacI PF00356 Domain 26 29289 45.90 41 13.66 Changed Bacterial regulatory proteins, lacI family
Lact-deh-memb PF09330 Domain 19 896 277.90 68 51.68 Changed D-lactate dehydrogenase, membrane binding
Lactamase_B PF00753 Domain 305 34807 193.00 14 50.57 Changed Metallo-beta-lactamase superfamily
Lactamase_B_2 PF12706 Domain 268 12584 209.10 16 60.92 Changed Beta-lactamase superfamily domain
Lactamase_B_3 PF13483 Domain 85 2488 181.30 21 68.69 Changed Beta-lactamase superfamily domain
Lactamase_B_4 PF13691 Domain 41 279 61.80 37 7.17 Changed tRNase Z endonuclease
Lactamase_B_5 PF14597 Domain 4 14 190.30 39 92.85 New Metallo-beta-lactamase superfamily
Lactate_perm PF02652 Family 8 3338 490.80 36 95.93 Changed L-lactate permease
Lactococcin PF04369 Family 3 23 51.00 27 76.43 Changed Lactococcin-like family
Lactococcin_972 PF09683 Family 6 605 60.30 44 66.27 Changed Bacteriocin (Lactococcin_972)
Lactonase PF10282 Family 81 4118 268.50 22 71.36 Changed Lactonase, 7-bladed beta-propeller
Lact_bio_phlase PF09508 Family 7 288 673.60 54 98.37 Changed Lacto-N-biose phosphorylase
LacY_symp PF01306 Family 4 1275 380.70 39 96.84 Changed LacY proton/sugar symporter
Lac_bphage_repr PF06543 Family 4 31 49.90 55 35.06 Changed Lactococcus bacteriophage repressor
LAG1-DNAbind PF09271 Domain 12 251 132.00 55 24.73 Changed LAG1, DNA binding
LAGLIDADG_1 PF00961 Domain 91 1228 96.80 21 50.58 Changed LAGLIDADG endonuclease
LAGLIDADG_2 PF03161 Family 18 250 167.00 22 52.22 Changed LAGLIDADG DNA endonuclease family
LAGLIDADG_3 PF14528 Domain 233 970 81.20 21 10.86 New LAGLIDADG-like domain
LAGLIDADG_WhiA PF14527 Domain 23 1981 93.00 42 29.70 New WhiA LAGLIDADG-like domain
LamB PF02264 Domain 6 1601 388.90 35 86.13 Changed LamB porin
Lambda_Bor PF06291 Family 2 335 94.10 75 96.65 Changed Bor protein
Lambda_CIII PF02061 Family 3 144 42.50 77 81.18 Changed Lambda Phage CIII
Lambda_Kil PF06301 Family 3 292 42.10 66 73.92 Changed Bacteriophage lambda Kil protein
Lambda_tail_I PF06805 Family 15 1136 71.30 56 35.56 Changed Bacteriophage lambda tail assembly protein I
LamB_YcsF PF03746 Family 15 2484 236.60 45 95.10 Changed LamB/YcsF family
Laminin_B PF00052 Family 9 950 133.20 26 8.37 Changed Laminin B (Domain IV)
Laminin_EGF PF00053 Family 72 16492 49.50 30 19.94 Changed Laminin EGF-like (Domains III and V)
Laminin_G_1 PF00054 Domain 21 1504 130.20 24 13.02 Changed Laminin G domain
Laminin_G_2 PF02210 Domain 208 7915 128.10 19 16.04 Changed Laminin G domain
Laminin_G_3 PF13385 Domain 726 6160 168.50 14 16.23 Changed Concanavalin A-like lectin/glucanases superfamily
Laminin_I PF06008 Family 9 327 235.80 22 9.88 Changed Laminin Domain I
Laminin_II PF06009 Family 8 340 130.80 28 5.22 Changed Laminin Domain II
Laminin_N PF00055 Family 9 1311 213.80 31 15.25 Changed Laminin N-terminal (Domain VI)
Lamp PF01299 Family 25 515 247.70 23 80.35 Changed Lysosome-associated membrane glycoprotein (Lamp)
Lamprin PF06403 Family 2 8 122.90 78 98.60 Changed Lamprin
LAMTOR PF15454 Family 45 181 75.80 28 44.32 New Late endosomal/lysosomal adaptor and MAPK and MTOR activator
LAM_C PF12544 Family 14 526 90.00 46 21.48 Changed Lysine-2,3-aminomutase
LANC_like PF05147 Family 47 1539 282.40 16 54.42 Changed Lanthionine synthetase C-like protein
Lantibiotic_a PF14867 Family 14 26 31.70 45 48.22 New Lantibiotic alpha
Lant_dehyd_C PF04738 Family 37 446 415.20 17 49.92 Changed Lantibiotic dehydratase, C terminus
Lant_dehyd_N PF04737 Family 38 378 93.90 23 10.55 Changed Lantibiotic dehydratase, N terminus
LAP1C PF05609 Family 3 144 318.60 39 82.94 Changed Lamina-associated polypeptide 1C (LAP1C)
LAP2alpha PF11560 Family 2 25 209.20 60 33.77 Changed Lamina-associated polypeptide 2 alpha
Laps PF10169 Family 11 105 123.20 42 88.89 Changed Learning-associated protein
Lar_restr_allev PF14354 Family 63 206 60.10 35 47.56 Changed Restriction alleviation protein Lar
Las1 PF04031 Family 26 316 147.90 32 29.95 Changed Las1-like
LAT PF15234 Family 10 45 221.60 68 95.17 New Linker for activation of T-cells
Latarcin PF10279 Family 7 14 66.10 32 75.41 Changed Latarcin precursor
Latexin PF06907 Family 4 94 188.10 41 88.21 Changed Latexin
Late_protein_L1 PF00500 Domain 19 3438 179.90 45 98.21 Changed L1 (late) protein
Late_protein_L2 PF00513 Family 29 499 460.80 41 97.13 Changed Late Protein L2
Latrophilin PF02354 Family 3 436 235.30 47 23.71 Changed Latrophilin Cytoplasmic C-terminal region
Latrotoxin_C PF15658 Family 8 23 126.00 38 6.65 New Latrotoxin C-terminal domain
Lbh PF15317 Family 18 80 86.90 56 67.14 New Cardiac transcription factor regulator, Developmental protein
LBP_BPI_CETP PF01273 Family 36 774 166.10 17 38.69 Changed LBP / BPI / CETP family, N-terminal domain
LBP_BPI_CETP_C PF02886 Domain 10 709 211.60 20 46.01 Changed LBP / BPI / CETP family, C-terminal domain
LBR_tudor PF09465 Domain 5 85 53.10 54 9.68 Changed Lamin-B receptor of TUDOR domain
LCAT PF02450 Family 7 1122 256.00 21 58.91 Changed Lecithin:cholesterol acyltransferase
LCCL PF03815 Domain 68 852 100.40 30 19.17 Changed LCCL domain
LCD1 PF09798 Family 6 47 601.70 32 89.65 Changed DNA damage checkpoint protein
LCE PF14672 Family 10 255 71.30 56 80.19 New Late cornified envelope
lci PF12197 Domain 4 37 38.90 38 34.23 Changed Bacillus cereus group antimicrobial protein
LCM PF04072 Family 211 3171 173.20 26 52.57 Changed Leucine carboxyl methyltransferase
LcnG-beta PF11632 Family 2 5 35.00 70 63.87 Changed Lactococcin G-beta
LcrG PF07216 Family 4 75 95.30 52 99.54 Changed LcrG protein
LcrR PF09621 Family 7 286 113.30 36 83.16 Changed Type III secretion system regulator (LcrR)
LcrV PF04792 Family 2 127 260.30 49 80.26 Changed V antigen (LcrV) protein
LDB19 PF13002 Family 5 121 181.80 37 30.53 Changed Arrestin_N terminal like
Ldh_1_C PF02866 Domain 19 12166 135.60 32 49.53 Changed lactate/malate dehydrogenase, alpha/beta C-terminal domain
Ldh_1_N PF00056 Family 31 12983 125.70 35 47.64 Changed lactate/malate dehydrogenase, NAD binding domain
Ldh_2 PF02615 Family 8 2631 322.80 31 94.97 Changed Malate/L-lactate dehydrogenase
Ldl_recept_a PF00057 Repeat 53 19728 38.20 41 15.75 Changed Low-density lipoprotein receptor domain class A
Ldl_recept_b PF00058 Repeat 28 8618 41.70 31 14.93 Changed Low-density lipoprotein receptor repeat class B
LdpA_C PF12617 Family 45 96 186.40 40 51.44 Changed Iron-Sulfur binding protein C terminal
Ldr_toxin PF13940 Family 5 958 34.90 74 70.82 Changed Toxin Ldr, type I toxin-antitoxin system
Leader_CPA1 PF08252 Family 3 17 23.50 64 40.24 Changed arg-2/CPA1 leader peptide
Leader_Erm PF08253 Family 5 32 18.80 80 82.42 Changed Erm Leader peptide
Leader_Thr PF08254 Family 2 68 21.20 87 98.63 Changed Threonine leader peptide
Leader_Trp PF08255 Family 4 51 14.00 71 91.30 Changed Trp-operon Leader Peptide
LEAP-2 PF07359 Family 2 67 75.00 52 66.92 Changed Liver-expressed antimicrobial peptide 2 precursor (LEAP-2)
LEA_1 PF03760 Family 8 153 71.70 43 51.71 Changed Late embryogenesis abundant (LEA) group 1
LEA_2 PF03168 Family 144 1601 100.30 16 47.34 Changed Late embryogenesis abundant protein
LEA_3 PF03242 Family 13 167 86.70 32 82.53 Changed Late embryogenesis abundant protein
LEA_4 PF02987 Family 26 1180 40.60 29 59.19 Changed Late embryogenesis abundant protein
LEA_5 PF00477 Family 5 271 71.90 39 87.44 Changed Small hydrophilic plant seed protein
LEA_6 PF10714 Family 6 28 80.70 48 71.36 Changed Late embryogenesis abundant protein 18
Lebercilin PF15619 Family 31 158 180.10 39 32.43 New Ciliary protein causing Leber congenital amaurosis disease
Lectin_C PF00059 Domain 95 12227 107.50 20 30.77 Changed Lectin C-type domain
Lectin_leg-like PF03388 Family 8 783 200.80 27 52.53 Changed Legume-like lectin family
Lectin_legB PF00139 Domain 47 1651 204.20 27 39.67 Changed Legume lectin domain
Lectin_N PF03954 Family 5 128 121.20 43 48.84 Changed Hepatic lectin, N-terminal domain
LEDGF PF11467 Family 9 180 106.50 42 20.50 Changed Lens epithelium-derived growth factor (LEDGF)
LEF-4 PF05098 Family 25 64 434.20 40 97.95 Changed Late expression factor 4 (LEF-4)
LEF-8 PF04941 Family 7 329 320.40 47 92.17 Changed Late expression factor 8 (LEF-8)
LEF-9 PF05094 Family 7 276 180.10 76 98.01 Changed Late expression factor 9 (LEF-9)
Legionella_OMP PF05150 Family 2 182 199.50 58 94.10 Changed Legionella pneumophila major outer membrane protein precursor
LEH PF07858 Domain 7 167 120.10 39 83.09 Changed Limonene-1,2-epoxide hydrolase catalytic domain
LELP1 PF15042 Family 3 23 85.90 71 91.06 New Late cornified envelope-like proline-rich protein 1
LEM PF03020 Domain 8 494 41.30 39 7.99 Changed LEM domain
LemA PF04011 Family 10 2668 183.70 35 94.86 Changed LemA family
Lem_TRP PF08262 Family 4 4 10.00 72 100.00 Changed Leucophaea maderae tachykinin-related peptide
Lentiviral_Tat PF02998 Family 7 50 58.70 81 96.23 Changed Lentiviral Tat protein
Lentivirus_VIF PF05851 Family 4 25 235.20 54 97.13 Changed Lentivirus virion infectivity factor (VIF)
Lenti_VIF_2 PF07401 Family 2 22 133.50 40 59.32 Changed Bovine Lentivirus VIF protein
Leo1 PF04004 Family 86 331 165.30 31 32.43 Changed Leo1-like protein
LEP503 PF15221 Family 3 18 61.10 81 92.36 New Lens epithelial cell protein LEP503
LepA_C PF06421 Family 45 4879 106.40 65 17.86 Changed GTP-binding protein LepA C-terminus
Leptin PF02024 Domain 7 218 120.30 70 91.48 Changed Leptin
Lep_receptor_Ig PF06328 Domain 12 304 86.50 28 10.89 Changed Ig-like C2-type domain
LETM1 PF07766 Family 13 760 218.00 28 44.32 Changed LETM1-like protein
LeuA_dimer PF08502 Domain 57 5003 133.80 27 25.84 Changed LeuA allosteric (dimerisation) domain
Leucyl-specific PF14795 Domain 9 12 55.90 70 6.37 New Leucine-tRNA synthetase-specific domain
Leuk-A4-hydro_C PF09127 Domain 37 628 142.00 25 23.77 Changed Leukotriene A4 hydrolase, C-terminal
Leukemia_assc_2 PF15197 Family 6 9 53.30 76 83.92 New Leukemia-associated protein 2
Leukocidin PF07968 Domain 19 1628 237.50 36 70.82 Changed Leukocidin/Hemolysin toxin family
Leu_leader PF08054 Family 4 72 27.80 79 95.61 Changed Leucine operon leader peptide
Leu_Phe_trans PF03588 Family 9 2004 170.90 46 73.57 Changed Leucyl/phenylalanyl-tRNA protein transferase
Leu_zip PF15294 Family 18 148 222.00 42 84.38 New Leucine zipper
Levi_coat PF01819 Domain 5 151 102.30 51 72.02 Changed Levivirus coat protein
LexA_DNA_bind PF01726 Domain 9 3433 64.30 40 31.34 Changed LexA DNA binding domain
Lge1 PF11488 Family 20 157 100.90 37 32.56 Changed Transcriptional regulatory protein LGE1
LGFP PF08310 Repeat 31 1397 52.30 30 25.49 Changed LGFP repeat
Lgl_C PF08596 Family 13 313 278.70 24 27.85 Changed Lethal giant larvae(Lgl) like, C-terminal
LGT PF01790 Family 67 5002 251.80 31 88.04 Changed Prolipoprotein diacylglyceryl transferase
LHC PF00556 Domain 28 509 38.60 27 65.17 Changed Antenna complex alpha/beta subunit
LHH PF14411 Family 25 102 81.20 35 12.15 Changed A nuclease of the HNH/ENDO VII superfamily with conserved LHH
LicD PF04991 Domain 142 2479 187.40 23 55.89 Changed LicD family
LIF_OSM PF01291 Domain 5 88 150.60 44 76.61 Changed LIF / OSM family
LigA PF07746 Family 40 275 83.40 30 44.05 Changed Aromatic-ring-opening dioxygenase LigAB, LigA subunit
Ligase_CoA PF00549 Domain 20 8836 125.00 32 32.56 Changed CoA-ligase
LigB PF02900 Domain 47 3175 260.20 23 90.78 Changed Catalytic LigB subunit of aromatic ring-opening dioxygenase
LigD_N PF13298 Family 134 675 106.30 50 16.03 Changed DNA polymerase Ligase (LigD)
LigT_PEase PF02834 Family 107 1248 80.60 31 52.39 Changed LigT like Phosphoesterase
Lig_chan PF00060 Family 44 3260 253.80 21 33.83 Changed Ligand-gated ion channel
Lig_chan-Glu_bd PF10613 Domain 82 1132 64.60 46 8.17 Changed Ligated ion channel L-glutamate- and glycine-binding site
LIM PF00412 Domain 38 16362 57.20 26 24.59 Changed LIM domain
LIME1 PF15332 Family 8 37 187.90 51 73.69 New Lck-interacting transmembrane adapter 1
Limkain-b1 PF11608 Family 5 78 86.10 62 6.32 Changed Limkain b1
LIM_bind PF01803 Family 42 464 206.00 32 39.09 Changed LIM-domain binding protein
Lin-8 PF03353 Family 14 108 233.90 14 66.63 Changed Ras-mediated vulval-induction antagonist
Lin0512_fam PF09585 Family 22 222 110.20 39 85.68 Changed Conserved hypothetical protein (Lin0512_fam)
LIN37 PF15306 Family 48 143 153.20 28 60.56 New LIN37
LINES_C PF14695 Family 20 93 38.70 47 5.50 New Lines C-terminus
LINES_N PF14694 Family 9 107 284.60 32 45.46 New Lines N-terminus
Linker_histone PF00538 Domain 20 1947 71.20 32 23.85 Changed linker histone H1 and H5 family
Linocin_M18 PF04454 Family 59 323 246.00 34 89.18 Changed Encapsulating protein for peroxidase
LIP PF03583 Family 12 1102 260.10 24 62.70 Changed Secretory lipase
Lipase PF00151 Domain 16 1975 262.60 27 71.62 Changed Lipase
Lipase3_N PF03893 Domain 10 181 71.60 22 15.93 Changed Lipase 3 N-terminal region
Lipase_2 PF01674 Family 15 461 188.40 27 62.77 Changed Lipase (class 2)
Lipase_3 PF01764 Family 61 3914 139.30 18 28.90 Changed Lipase (class 3)
Lipase_bact_N PF12262 Family 8 221 250.40 33 33.22 Changed Bacterial virulence factor lipase N-terminal
Lipase_chap PF03280 Family 34 328 184.30 29 59.61 Changed Proteobacterial lipase chaperone protein
Lipase_GDSL PF00657 Family 65 4517 269.30 15 70.51 Changed GDSL-like Lipase/Acylhydrolase
Lipase_GDSL_2 PF13472 Domain 323 11620 188.90 16 56.62 Changed GDSL-like Lipase/Acylhydrolase family
Lipase_GDSL_3 PF14606 Domain 20 244 161.20 31 41.20 New GDSL-like Lipase/Acylhydrolase family
Lipid_bd PF12888 Family 5 26 114.50 33 67.72 Changed Lipid-binding putative hydrolase
Lipid_DES PF08557 Domain 24 352 37.80 47 11.04 Changed Sphingolipid Delta4-desaturase (DES)
Lipin_N PF04571 Family 10 549 107.30 51 13.02 Changed lipin, N-terminal conserved region
Lipl32 PF12103 Domain 4 121 179.70 90 77.15 Changed Surface lipoprotein of Spirochaetales order
Lipocalin PF00061 Domain 156 2221 128.60 17 76.93 Changed Lipocalin / cytosolic fatty-acid binding protein family
Lipocalin_2 PF08212 Domain 19 1931 138.30 39 74.08 Changed Lipocalin-like domain
Lipocalin_3 PF12702 Domain 17 79 90.60 30 55.05 Changed Lipocalin-like
Lipocalin_4 PF13648 Domain 116 502 115.20 14 70.75 Changed Lipocalin-like domain
Lipocalin_5 PF13924 Domain 68 249 132.90 25 64.70 Changed Lipocalin-like domain
Lipocalin_6 PF13944 Domain 21 111 127.70 22 39.62 Changed Lipocalin-like domain
Lipocalin_7 PF14651 Domain 3 209 119.60 38 94.68 New Lipocalin / cytosolic fatty-acid binding protein family
Lipoprotein_1 PF00820 Family 7 599 175.20 69 94.88 Changed Borrelia lipoprotein
Lipoprotein_10 PF03202 Family 12 80 128.20 30 19.30 Changed Putative mycoplasma lipoprotein, C-terminal region
Lipoprotein_11 PF03260 Family 6 84 234.40 40 85.01 Changed Lepidopteran low molecular weight (30 kD) lipoprotein
Lipoprotein_15 PF03640 Repeat 22 995 45.30 32 56.64 Changed Secreted repeat of unknown function
Lipoprotein_16 PF03923 Family 25 800 156.60 50 82.07 Changed Uncharacterized lipoprotein
Lipoprotein_17 PF04200 Domain 272 508 92.90 16 31.67 Changed Lipoprotein associated domain
Lipoprotein_18 PF06804 Family 6 1056 267.20 36 77.58 Changed NlpB/DapX lipoprotein
Lipoprotein_19 PF13617 Family 77 733 58.00 58 90.54 Changed YnbE-like lipoprotein
Lipoprotein_2 PF00921 Family 16 1748 138.10 61 67.07 Changed Borrelia lipoprotein
Lipoprotein_20 PF13942 Family 26 543 177.70 71 74.12 Changed YfhG lipoprotein
Lipoprotein_21 PF14041 Family 49 283 87.80 29 41.83 Changed LppP/LprE lipoprotein
Lipoprotein_3 PF00938 Family 16 55 81.00 39 33.93 Changed Lipoprotein
Lipoprotein_5 PF01298 Family 37 819 399.10 24 87.70 Changed Transferrin binding protein-like solute binding protein
Lipoprotein_6 PF01441 Family 42 763 168.60 61 91.18 Changed Lipoprotein
Lipoprotein_7 PF01540 Family 3 40 200.70 50 99.44 Changed Adhesin lipoprotein
Lipoprotein_8 PF02030 Family 3 61 438.40 27 76.45 Changed Hypothetical lipoprotein (MG045 family)
Lipoprotein_9 PF03180 Family 35 6507 229.70 38 86.36 Changed NLPA lipoprotein
Lipoprotein_Ltp PF07553 Domain 18 773 47.10 43 32.24 Changed Host cell surface-exposed lipoprotein
Lipoprotein_X PF03305 Family 17 77 232.50 27 33.10 Changed Mycoplasma MG185/MG260 protein
Lipoprot_C PF08794 Domain 2 580 148.80 63 58.36 Changed Lipoprotein GNA1870 C terminal like
Lipoxygenase PF00305 Domain 16 1473 407.70 28 73.57 Changed Lipoxygenase
Lip_A_acyltrans PF03279 Family 13 5234 280.50 24 90.64 Changed Bacterial lipid A biosynthesis acyltransferase
Lip_prot_lig_C PF10437 Domain 94 2280 85.30 33 26.19 Changed Bacterial lipoate protein ligase C-terminus
Lir1 PF07207 Family 5 52 122.90 41 93.23 Changed Light regulated protein Lir1
LisH PF08513 Domain 58 1365 26.50 35 4.96 Changed LisH
LIX1 PF14954 Family 8 135 228.70 68 83.86 New Limb expression 1
LKAAEAR PF15478 Family 8 31 117.80 48 65.91 New Family of unknown function with LKAAEAR motif
LktC PF06261 Family 2 18 139.60 91 99.45 Changed Actinobacillus actinomycetemcomitans leukotoxin activator LktC
LLC1 PF14945 Family 8 54 111.30 41 84.16 New Normal lung function maintenance, Low in Lung Cancer 1 protein
LLGL PF08366 Family 12 358 104.40 45 9.98 Changed LLGL2
LMBR1 PF04791 Family 9 832 364.40 17 72.65 Changed LMBR1-like membrane protein
LMF1 PF06762 Family 25 402 338.00 35 69.50 Changed Lipase maturation factor
LmjF365940-deam PF14421 Family 12 36 133.90 25 37.19 Changed A distinct subfamily of CDD/CDA-like deaminases
LMP PF04778 Family 6 52 142.60 60 48.35 Changed LMP repeated region
LMSTEN PF07988 Motif 6 191 46.60 72 7.43 Changed LMSTEN motif
LMWPc PF01451 Domain 27 7884 133.10 26 83.15 Changed Low molecular weight phosphotyrosine protein phosphatase
LMWSLP_N PF12211 Domain 19 115 234.00 34 61.87 Changed Low molecular weight S layer protein N terminal
LNP1 PF15419 Family 12 48 150.80 60 94.99 New Leukemia NUP98 fusion partner 1
LNS2 PF08235 Domain 16 814 147.40 44 17.04 Changed LNS2 (Lipin/Ned1/Smp2)
LOH1CR12 PF10158 Family 5 152 104.40 47 44.96 Changed Tumour suppressor protein
LolA PF03548 Family 39 2649 159.10 24 75.94 Changed Outer membrane lipoprotein carrier protein LolA
LolB PF03550 Family 24 1327 154.60 36 75.40 Changed Outer membrane lipoprotein LolB
LON PF02190 Family 158 5691 199.10 23 30.32 Changed ATP-dependent protease La (LON) domain
Longin PF13774 Domain 180 1355 84.60 23 37.83 Changed Regulated-SNARE-like domain
Lon_2 PF13337 Family 53 313 438.10 48 68.76 Changed Putative ATP-dependent Lon protease
Lon_C PF05362 Domain 25 7706 174.80 32 25.91 Changed Lon protease (S16) C-terminal proteolytic domain
LPAM_1 PF08139 Motif 71 711 24.40 62 12.78 Changed Prokaryotic membrane lipoprotein lipid attachment site
LPAM_2 PF13627 Motif 142 1185 24.30 50 36.96 Changed Prokaryotic lipoprotein-attachment site
LPP PF04728 Domain 19 1023 55.30 64 68.34 Changed Lipoprotein leucine-zipper
Lpp-LpqN PF10738 Family 19 257 179.40 35 72.00 Changed Probable lipoprotein LpqN
LPP20 PF02169 Family 81 734 101.10 22 44.89 Changed LPP20 lipoprotein
LppC PF04348 Family 6 1623 366.20 30 91.36 Changed LppC putative lipoprotein
LptC PF06835 Family 64 2204 166.70 19 80.55 Changed Lipopolysaccharide-assembly, LptC-related
LptE PF04390 Family 162 2176 153.80 20 84.72 Changed Lipopolysaccharide-assembly
LpxB PF02684 Family 8 2446 358.50 35 93.79 Changed Lipid-A-disaccharide synthetase
LpxC PF03331 Family 10 2676 253.70 43 87.84 Changed UDP-3-O-acyl N-acetylglycosamine deacetylase
LpxD PF04613 Family 90 2398 71.20 31 20.84 Changed UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
LpxK PF02606 Family 173 2466 293.20 33 91.66 Changed Tetraacyldisaccharide-1-P 4'-kinase
LRAT PF04970 Domain 32 808 120.20 26 54.98 Changed Lecithin retinol acyltransferase
LrgA PF03788 Family 148 3245 95.60 31 72.62 Changed LrgA family
LrgB PF04172 Family 36 3458 210.90 35 88.87 Changed LrgB-like family
LRR19-TM PF15176 Domain 9 67 103.90 48 43.54 New Leucine-rich repeat family 19 TM domain
LRRC37AB_C PF14914 Family 5 149 137.50 61 14.63 New LRRC37A/B like protein 1 C-terminal domain
LRRCT PF01463 Family 59 1112 25.80 34 6.10 Changed Leucine rich repeat C-terminal domain
LRRNT PF01462 Family 26 4081 29.00 41 7.50 Changed Leucine rich repeat N-terminal domain
LRRNT_2 PF08263 Family 101 5573 41.00 31 5.53 Changed Leucine rich repeat N-terminal domain
LRR_1 PF00560 Repeat 2414 25597 23.30 33 5.68 Changed Leucine Rich Repeat
LRR_2 PF07723 Repeat 161 389 25.70 36 6.48 Changed Leucine Rich Repeat
LRR_3 PF07725 Repeat 74 609 19.90 51 2.28 Changed Leucine Rich Repeat
LRR_4 PF12799 Family 569 21961 44.60 29 11.83 Changed Leucine Rich repeats (2 copies)
LRR_5 PF13306 Family 205 12012 113.30 19 48.31 Changed Leucine rich repeats (6 copies)
LRR_6 PF13516 Repeat 889 30484 24.90 27 9.82 Changed Leucine Rich repeat
LRR_7 PF13504 Repeat 1228 2943 18.00 36 3.46 Changed Leucine rich repeat
LRR_8 PF13855 Repeat 93 70869 59.50 28 22.98 Changed Leucine rich repeat
LRR_9 PF14580 Repeat 6 1482 148.50 27 32.21 New Leucine-rich repeat
LRR_adjacent PF08191 Family 29 1133 56.90 48 9.22 Changed LRR adjacent
LRS4 PF10422 Family 5 29 226.90 38 72.84 Changed Monopolin complex subunit LRS4
LRV PF01816 Repeat 56 206 25.00 40 14.00 Changed Leucine rich repeat variant
LRV_FeS PF05484 Family 4 74 55.80 44 21.33 Changed LRV protein FeS4 cluster
LSM PF01423 Domain 129 8102 67.00 23 58.52 Changed LSM domain
LSM14 PF12701 Domain 156 564 94.00 40 21.39 Changed Scd6-like Sm domain
LsmAD PF06741 Domain 26 396 70.30 42 7.87 Changed LsmAD domain
Lsm_C PF14894 Domain 14 43 62.80 46 43.66 New Lsm C-terminal
Lsm_interact PF05391 Motif 9 94 20.50 47 2.66 Changed Lsm interaction motif
LSPR PF06049 Repeat 33 291 9.00 64 11.44 Changed Coagulation Factor V LSPD Repeat
LSR PF05624 Domain 3 176 48.90 70 8.91 Changed Lipolysis stimulated receptor (LSR)
Lsr2 PF11774 Family 69 720 101.80 37 66.89 Changed Lsr2
LssY_C PF14067 Family 48 217 174.90 23 33.97 Changed LssY C-terminus
LST1 PF05083 Family 3 46 61.30 43 73.44 Changed LST-1 protein
LT-IIB PF06453 Domain 2 7 121.70 64 99.77 Changed Type II heat-labile enterotoxin , B subunit (LT-IIB)
LTD PF00932 Domain 51 1619 119.30 18 18.47 Changed Lamin Tail Domain
LTP_2 PF14368 Family 72 1249 97.10 20 61.47 Changed Probable lipid transfer
LtrA PF06772 Family 9 969 321.40 22 81.25 Changed Bacterial low temperature requirement A protein (LtrA)
LTV PF04180 Family 4 274 368.80 26 86.00 Changed Low temperature viability protein
LTXXQ PF07813 Family 46 1977 99.30 31 59.45 Changed LTXXQ motif family protein
LUC7 PF03194 Family 8 689 242.10 34 76.98 Changed LUC7 N_terminus
Luciferase_3H PF10284 Domain 7 51 65.80 70 21.82 Changed Luciferase helical bundle domain
Luciferase_cat PF10285 Domain 3 71 174.50 64 66.51 Changed Luciferase catalytic domain
Luciferase_N PF05295 Domain 13 14 81.60 58 8.43 Changed Luciferase/LBP N-terminal domain
Lumazine_bd PF12870 Family 26 650 96.70 23 43.48 Changed Lumazine-binding domain
Lumazine_bd_2 PF12893 Family 61 306 116.00 21 75.47 Changed Putative lumazine-binding
Lum_binding PF00677 Domain 20 8363 84.80 32 79.71 Changed Lumazine binding domain
Lung_7-TM_R PF06814 Family 15 836 251.00 26 55.43 Changed Lung seven transmembrane receptor
LURAP PF14854 Family 7 138 103.30 40 36.75 New Leucine rich adaptor protein
Lustrin_cystein PF14625 Domain 56 1210 45.60 27 22.43 New Lustrin, cysteine-rich repeated domain
Luteo_coat PF00894 Family 13 1368 131.00 58 53.22 Changed Luteovirus coat protein
Luteo_P1-P2 PF08467 Family 4 151 332.90 77 58.24 Changed Luteovirus RNA polymerase P1-P2/replicase
Luteo_PO PF04662 Family 8 137 208.60 35 86.25 Changed Luteovirus P0 protein
Luteo_Vpg PF01659 Family 8 687 103.60 47 67.26 Changed Luteovirus putative VPg genome linked protein
LuxC PF05893 Family 13 358 335.20 21 69.60 Changed Acyl-CoA reductase (LuxC)
LuxE PF04443 Family 7 387 321.20 24 83.12 Changed Acyl-protein synthetase, LuxE
LuxQ-periplasm PF09308 Domain 6 115 236.20 54 28.02 Changed LuxQ, periplasmic
LuxS PF02664 Family 5 2731 152.40 46 95.62 Changed S-Ribosylhomocysteinase (LuxS)
LVIVD PF08309 Repeat 22 449 40.50 33 8.98 Changed LVIVD repeat
LXG PF04740 Family 35 970 186.40 20 39.12 Changed LXG domain of WXG superfamily
Ly-6_related PF06579 Family 4 68 113.00 30 62.49 Changed Caenorhabditis elegans ly-6-related protein
Ly49 PF08391 Family 27 249 113.20 44 46.66 Changed Ly49-like protein, N-terminal region
Lyase_1 PF00206 Domain 18 16439 297.30 26 66.01 Changed Lyase
Lyase_8 PF02278 Family 5 1067 260.60 32 28.72 Changed Polysaccharide lyase family 8, super-sandwich domain
Lyase_8_C PF02884 Domain 29 875 76.70 25 8.46 Changed Polysaccharide lyase family 8, C-terminal beta-sandwich domain
Lyase_8_N PF08124 Family 26 980 312.20 30 35.54 Changed Polysaccharide lyase family 8, N terminal alpha-helical domain
Lyase_aromatic PF00221 Family 143 3331 434.10 35 86.47 Changed Aromatic amino acid lyase
Lyase_catalyt PF09093 Domain 4 140 351.20 36 35.10 Changed Lyase, catalytic
Lyase_N PF09092 Domain 8 133 177.80 36 17.68 Changed Lyase, N terminal
Lycopene_cycl PF05834 Family 20 839 323.20 23 76.95 Changed Lycopene cyclase protein
Lys PF00062 Domain 21 1035 110.30 37 77.66 Changed C-type lysozyme/alpha-lactalbumin family
Lys-AminoMut_A PF09043 Domain 8 226 435.60 50 68.49 Changed D-Lysine 5,6-aminomutase alpha subunit
LysE PF01810 Family 19 13176 188.60 20 91.83 Changed LysE type translocator
Lysine_decarbox PF03641 Family 32 5042 131.70 28 49.24 Changed Possible lysine decarboxylase
Lysis_col PF02402 Family 9 52 45.10 67 96.50 Changed Lysis protein
Lysis_S PF04971 Family 7 1200 66.40 84 94.47 Changed Lysis protein S
LysM PF01476 Domain 156 27194 44.30 31 16.15 Changed LysM domain
Lysozyme_like PF13702 Domain 63 1147 158.50 43 52.92 Changed Lysozyme-like
LysR_substrate PF03466 Family 415 85941 202.80 15 67.81 Changed LysR substrate binding domain
Lysyl_oxidase PF01186 Family 4 515 188.90 54 36.67 Changed Lysyl oxidase
LYTB PF02401 Family 13 3664 277.30 42 82.28 Changed LytB protein
LytR_C PF13399 Domain 203 1654 91.50 23 24.14 Changed LytR cell envelope-related transcriptional attenuator
LytR_cpsA_psr PF03816 Family 37 6551 152.40 32 38.41 Changed Cell envelope-related transcriptional attenuator domain
LytTR PF04397 Domain 114 8937 96.10 22 42.29 Changed LytTr DNA-binding domain
Lzipper-MIP1 PF14389 Family 39 340 83.90 31 13.80 Changed Leucine-zipper of ternary complex factor MIP1
LZ_Tnp_IS481 PF13011 Family 2 445 81.90 41 27.81 Changed leucine-zipper of insertion element IS481
LZ_Tnp_IS66 PF13007 Family 254 3061 73.50 31 17.94 Changed Transposase C of IS166 homeodomain
L_biotic_typeA PF04604 Family 15 102 48.00 40 91.69 Changed Type-A lantibiotic
L_HGMIC_fpl PF10242 Family 18 458 165.10 32 78.27 Changed Lipoma HMGIC fusion partner-like protein
L_lactis_ph-MCP PF06673 Family 2 7 346.70 95 81.31 Changed Lactococcus lactis bacteriophage major capsid protein
L_lactis_RepB_C PF06430 Family 13 139 119.00 64 33.07 Changed Lactococcus lactis RepB C-terminus
L_lac_phage_MSP PF06488 Family 2 78 214.50 62 72.90 Changed Lactococcus lactis bacteriophage major structural protein
L_protein_N PF15518 Domain 11 334 165.00 60 28.09 New L protein N-terminus
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