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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
1-cysPrx_C PF10417 Domain 86 5521 35.40 38 17.34 Changed C-terminal domain of 1-Cys peroxiredoxin
120_Rick_ant PF12574 Family 7 128 227.80 70 29.18 Changed 120 KDa Rickettsia surface antigen
14-3-3 PF00244 Domain 85 2097 196.20 57 83.35 Changed 14-3-3 protein
2-Hacid_dh PF00389 Domain 98 16860 308.20 17 85.12 Changed D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
2-Hacid_dh_C PF02826 Domain 161 20266 171.60 30 48.83 Changed D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
2-oxoacid_dh PF00198 Domain 100 10039 224.80 35 47.20 Changed 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
2-ph_phosp PF04029 Family 61 532 226.60 27 93.52 Changed 2-phosphosulpholactate phosphatase
23S_rRNA_IVP PF05635 Family 122 1034 104.30 26 82.27 Changed 23S rRNA-intervening sequence protein
2CSK_N PF08521 Family 111 966 146.10 28 30.67 Changed Two-component sensor kinase N-terminal
2C_adapt PF08793 Domain 38 112 36.90 36 19.63 Changed 2-cysteine adaptor domain
2Fe-2S_Ferredox PF11591 Family 2 6 33.00 80 25.98 Changed Ferredoxin chloroplastic transit peptide
2Fe-2S_thioredx PF01257 Family 178 4533 131.40 29 53.12 Changed Thioredoxin-like [2Fe-2S] ferredoxin
2H-phosphodiest PF08975 Domain 13 265 117.50 61 51.47 Changed Domain of unknown function (DUF1868)
2HCT PF03390 Family 36 838 398.60 39 93.58 Changed 2-hydroxycarboxylate transporter family
2OG-FeII_Oxy PF03171 Domain 138 7390 101.90 28 28.36 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_2 PF13532 Domain 71 3255 187.80 22 55.86 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_3 PF13640 Domain 172 3739 99.90 24 31.62 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_4 PF13661 Domain 39 165 68.40 19 21.49 Changed 2OG-Fe(II) oxygenase superfamily
2OG-FeII_Oxy_5 PF13759 Family 92 313 98.90 26 31.52 Changed Putative 2OG-Fe(II) oxygenase
2OG-Fe_Oxy_2 PF10014 Family 113 432 193.40 28 79.36 Changed 2OG-Fe dioxygenase
2TM PF13239 Family 128 506 80.20 23 53.61 Changed 2TM domain
2_5_RNA_ligase2 PF13563 Family 139 2076 152.70 17 68.99 Changed 2'-5' RNA ligase superfamily
3-alpha PF03475 Domain 49 1443 46.50 31 19.76 Changed 3-alpha domain
3-dmu-9_3-mt PF06983 Family 25 2984 128.00 27 87.56 Changed 3-demethylubiquinone-9 3-methyltransferase
3-HAO PF06052 Family 5 387 145.40 44 74.95 Changed 3-hydroxyanthranilic acid dioxygenase
3-PAP PF12578 Family 21 204 124.90 25 18.37 Changed Myotubularin-associated protein
3A PF00803 Family 27 894 209.50 48 84.13 Changed 3A/RNA2 movement protein family
3Beta_HSD PF01073 Family 12 1802 231.50 24 68.31 Changed 3-beta hydroxysteroid dehydrogenase/isomerase family
3D PF06725 Domain 41 3329 70.00 40 19.85 Changed 3D domain
3H PF02829 Family 57 945 98.00 42 55.62 Changed 3H domain
3HBOH PF10605 Family 13 134 584.70 48 90.33 Changed 3HB-oligomer hydrolase (3HBOH)
3HCDH PF00725 Domain 77 10901 93.80 27 23.85 Changed 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
3HCDH_N PF02737 Domain 74 8383 177.00 33 34.30 Changed 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
4F5 PF04419 Family 40 536 37.30 34 47.06 Changed 4F5 protein family
4HBT PF03061 Domain 140 18406 79.30 17 47.56 Changed Thioesterase superfamily
4HBT_2 PF13279 Domain 179 4845 126.80 18 76.66 Changed Thioesterase-like superfamily
4HBT_3 PF13622 Domain 200 2392 249.30 20 84.50 Changed Thioesterase-like superfamily
4HB_MCP_1 PF12729 Family 65 4710 176.50 14 30.92 Changed Four helix bundle sensory module for signal transduction
4_1_CTD PF05902 Domain 9 519 107.90 60 12.64 Changed 4.1 protein C-terminal domain (CTD)
5-FTHF_cyc-lig PF01812 Family 24 4810 177.40 26 87.98 Changed 5-formyltetrahydrofolate cyclo-ligase family
5-nucleotidase PF06189 Family 43 426 259.30 45 76.67 Changed 5'-nucleotidase
53-BP1_Tudor PF09038 Domain 3 89 117.20 74 7.46 Changed Tumour suppressor p53-binding protein-1 Tudor
5HT_transporter PF03491 Family 3 54 39.10 70 7.22 Changed Serotonin (5-HT) neurotransmitter transporter, N-terminus
5TM-5TMR_LYT PF07694 Domain 106 2704 168.50 27 32.17 Changed 5TMR of 5TMR-LYT
5_3_exonuc PF01367 Domain 27 6018 100.70 36 13.83 Changed 5'-3' exonuclease, C-terminal SAM fold
5_3_exonuc_N PF02739 Domain 25 6210 164.00 35 23.04 Changed 5'-3' exonuclease, N-terminal resolvase-like domain
5_nucleotid PF05761 Family 21 680 368.90 30 81.95 Changed 5' nucleotidase family
5_nucleotid_C PF02872 Domain 119 7487 166.60 21 29.23 Changed 5'-nucleotidase, C-terminal domain
60KD_IMP PF02096 Family 147 6198 199.40 31 48.09 Changed 60Kd inner membrane protein
6PF2K PF01591 Domain 11 1160 194.90 37 39.97 Changed 6-phosphofructo-2-kinase
6PGD PF00393 Domain 58 5458 231.40 44 59.81 Changed 6-phosphogluconate dehydrogenase, C-terminal domain
7kD_coat PF02495 Family 61 349 58.80 27 70.57 Changed 7kD viral coat protein
7kD_DNA_binding PF02294 Domain 2 33 61.50 90 96.62 Changed 7kD DNA-binding domain
7TM-7TMR_HD PF07698 Domain 99 879 193.80 20 27.36 Changed 7TM receptor with intracellular HD hydrolase
7TMR-DISMED2 PF07696 Domain 114 945 135.70 17 17.93 Changed 7TMR-DISM extracellular 2
7TMR-DISM_7TM PF07695 Domain 179 1345 202.00 15 27.75 Changed 7TM diverse intracellular signalling
7TMR-HDED PF07697 Domain 62 847 217.30 18 31.07 Changed 7TM-HD extracellular
7tm_1 PF00001 Family 64 42866 225.60 18 72.53 Changed 7 transmembrane receptor (rhodopsin family)
7tm_2 PF00002 Family 31 4718 225.10 22 28.73 Changed 7 transmembrane receptor (Secretin family)
7tm_3 PF00003 Family 109 4297 227.40 29 32.05 Changed 7 transmembrane sweet-taste receptor of 3 GCPR
7tm_4 PF13853 Family 118 25558 143.20 33 48.90 Changed Olfactory receptor
7tm_6 PF02949 Family 36 3836 248.70 14 75.32 Changed 7tm Odorant receptor
7tm_7 PF08395 Family 78 1580 315.20 12 89.70 Changed 7tm Chemosensory receptor
7TM_GPCR_Sra PF02117 Family 10 141 276.40 20 94.23 Changed Serpentine type 7TM GPCR chemoreceptor Sra
7TM_GPCR_Srab PF10292 Family 17 186 249.20 17 86.59 Changed Serpentine type 7TM GPCR receptor class ab chemoreceptor
7TM_GPCR_Srb PF02175 Family 3 69 199.20 35 65.84 Changed Serpentine type 7TM GPCR chemoreceptor Srb
7TM_GPCR_Srbc PF10316 Family 62 285 218.40 23 87.25 Changed Serpentine type 7TM GPCR chemoreceptor Srbc
7TM_GPCR_Srd PF10317 Family 59 467 209.10 18 81.09 Changed Serpentine type 7TM GPCR chemoreceptor Srd
7TM_GPCR_Srh PF10318 Family 186 1040 244.00 20 84.56 Changed Serpentine type 7TM GPCR chemoreceptor Srh
7TM_GPCR_Sri PF10327 Family 54 363 222.70 22 82.08 Changed Serpentine type 7TM GPCR chemoreceptor Sri
7TM_GPCR_Srj PF10319 Family 35 202 225.70 31 86.97 Changed Serpentine type 7TM GPCR chemoreceptor Srj
7TM_GPCR_Srsx PF10320 Family 23 428 174.00 18 62.30 Changed Serpentine type 7TM GPCR chemoreceptor Srsx
7TM_GPCR_Srt PF10321 Family 39 386 231.10 25 87.42 Changed Serpentine type 7TM GPCR chemoreceptor Srt
7TM_GPCR_Sru PF10322 Family 38 299 226.40 25 90.73 Changed Serpentine type 7TM GPCR chemoreceptor Sru
7TM_GPCR_Srv PF10323 Family 25 258 205.70 17 78.89 Changed Serpentine type 7TM GPCR chemoreceptor Srv
7TM_GPCR_Srw PF10324 Family 90 944 230.20 17 73.85 Changed Serpentine type 7TM GPCR chemoreceptor Srw
7TM_GPCR_Srx PF10328 Family 80 586 219.70 18 82.16 Changed Serpentine type 7TM GPCR chemoreceptor Srx
7TM_GPCR_Srz PF10325 Family 62 372 207.80 21 75.85 Changed Serpentine type 7TM GPCR chemoreceptor Srz
7TM_GPCR_Str PF10326 Family 178 1469 223.40 21 82.72 Changed Serpentine type 7TM GPCR chemoreceptor Str
7TM_transglut PF14402 Family 34 285 309.70 52 62.39 Changed 7 transmembrane helices usually fused to an inactive transglutaminase
New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z