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Browse Pfam families

New Top twenty Numbers A B C D E F G H I J K L M N O P Q R S T U V W X Y Z
ID Accession Type Number of sequences Average length Average %id Average coverage Has 3D Change status Description
Seed Full
P-II PF00543 Domain 93 4823 101.60 53 82.59 Changed Nitrogen regulatory protein P-II
P-mevalo_kinase PF04275 Family 11 154 113.90 38 29.84 Changed Phosphomevalonate kinase
P12 PF12669 Family 134 610 50.80 31 79.85 Changed Virus attachment protein p12 family
P120R PF08062 Repeat 6 44 21.90 49 6.15 Changed P120R (NUC006) repeat
p12I PF12233 Family 2 51 97.90 96 100.00 Changed Human adult T cell leukemia/lymphoma virus protein
P16-Arc PF04699 Domain 36 389 143.80 37 92.13 Changed ARP2/3 complex 16 kDa subunit (p16-Arc)
P19Arf_N PF07392 Family 6 33 50.20 71 51.22 Changed Cyclin-dependent kinase inhibitor 2a p19Arf N-terminus
P2 PF07194 Family 80 704 84.00 26 13.32 Changed P2 response regulator binding domain
P21-Arc PF04062 Family 29 364 170.20 48 94.42 Changed ARP2/3 complex ARPC3 (21 kDa) subunit
P22_AR_C PF10548 Domain 16 459 73.00 45 29.70 Changed P22AR C-terminal domain
P22_AR_N PF10547 Domain 13 394 115.70 53 47.21 Changed P22_AR N-terminal domain
P22_CoatProtein PF11651 Family 13 302 327.50 22 91.19 Changed P22 coat protein - gene protein 5
P22_Cro PF14549 Domain 33 735 58.40 33 75.46 New DNA-binding transcriptional regulator Cro
P22_Tail-4 PF11650 Family 6 137 158.50 51 97.54 Changed P22 tail accessory factor
p25-alpha PF05517 Family 24 380 138.70 30 57.31 Changed p25-alpha
P2X_receptor PF00864 Family 19 762 263.70 36 83.68 Changed ATP P2X receptor
P2_Phage_GpR PF06891 Family 48 720 130.00 37 85.41 Changed P2 phage tail completion protein R (GpR)
P30 PF07390 Family 2 12 189.00 57 98.69 Changed Mycoplasma P30 protein
p31comet PF06581 Family 3 64 238.90 56 86.91 Changed Mad1 and Cdc20-bound-Mad2 binding
P33MONOX PF15302 Family 13 91 232.10 60 95.71 New P33 mono-oxygenase
P34-Arc PF04045 Family 27 380 223.70 41 65.50 Changed Arp2/3 complex, 34 kD subunit p34-Arc
P35 PF02331 Domain 7 25 301.10 58 92.61 Changed Apoptosis preventing protein
P3A PF08727 Domain 21 1219 56.90 55 2.66 Changed Poliovirus 3A protein like
p450 PF00067 Domain 50 39592 330.60 17 79.49 Changed Cytochrome P450
p47_phox_C PF08944 Domain 12 85 58.90 39 14.82 Changed NADPH oxidase subunit p47Phox, C terminal domain
P4Ha_N PF08336 Family 57 702 123.70 30 26.34 Changed Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
P5-ATPase PF12409 Family 66 485 118.50 21 10.19 Changed P5-type ATPase cation transporter
P53 PF00870 Domain 7 550 158.10 54 43.93 Changed P53 DNA-binding domain
p53-inducible11 PF14936 Family 6 94 143.60 62 78.27 New Tumour protein p53-inducible protein 11
P53_C PF11619 Family 2 16 70.20 66 16.58 Changed Transcription factor P53 - C terminal domain
P53_TAD PF08563 Motif 12 143 24.40 62 6.48 Changed P53 transactivation motif
P53_tetramer PF07710 Motif 28 335 42.20 46 9.30 Changed P53 tetramerisation motif
P5CR_dimer PF14748 Domain 862 5462 105.90 36 39.32 New Pyrroline-5-carboxylate reductase dimerisation
P63C PF10546 Domain 12 137 89.00 38 30.96 Changed P63C domain
P68HR PF08061 Repeat 8 120 33.60 59 11.58 Changed P68HR (NUC004) repeat
PA PF02225 Family 69 5065 99.80 17 13.82 Changed PA domain
PA-IIL PF07472 Family 12 85 108.60 48 54.85 Changed Fucose-binding lectin II (PA-IIL)
PA-IL PF07828 Family 2 27 113.30 56 91.42 Changed PA-IL-like protein
PA14 PF07691 Domain 34 1994 135.80 15 13.85 Changed PA14 domain
PA14_2 PF10528 Domain 8 132 116.20 24 15.87 Changed GLEYA domain
PA26 PF04636 Family 13 327 362.70 43 81.45 Changed PA26 p53-induced protein (sestrin)
PA28_alpha PF02251 Family 18 310 61.10 41 23.66 Changed Proteasome activator pa28 alpha subunit
PA28_beta PF02252 Family 16 411 137.60 43 56.79 Changed Proteasome activator pa28 beta subunit
PaaA_PaaC PF05138 Family 117 1413 266.20 33 88.22 Changed Phenylacetic acid catabolic protein
PaaB PF06243 Family 43 641 92.20 56 92.12 Changed Phenylacetic acid degradation B
PAAR_motif PF05488 Motif 88 2205 74.40 27 19.69 Changed PAAR motif
PaaSYMP PF14738 Family 32 172 146.70 38 20.68 New Solute carrier (proton/amino acid symporter), TRAMD3 or PAT1
PaaX PF07848 Family 13 652 68.10 38 23.66 Changed PaaX-like protein
PaaX_C PF08223 Family 63 785 159.20 26 55.33 Changed PaaX-like protein C-terminal domain
Pab87_oct PF13969 Domain 6 15 95.70 34 22.07 Changed Pab87 octamerisation domain
PABP PF00658 Family 38 874 70.80 49 9.26 Changed Poly-adenylate binding protein, unique domain
PAC2 PF09754 Family 126 1323 221.70 21 77.96 Changed PAC2 family
Pacifastin_I PF05375 Family 36 190 37.20 36 11.86 Changed Pacifastin inhibitor (LCMII)
Packaging_FI PF14000 Family 13 521 120.80 49 94.02 Changed DNA packaging protein FI
Pacs-1 PF10254 Family 8 272 351.90 47 46.84 Changed PACS-1 cytosolic sorting protein
PACT_coil_coil PF10495 Domain 18 211 80.90 41 3.77 Changed Pericentrin-AKAP-450 domain of centrosomal targeting protein
PAD PF03068 Family 7 323 310.40 44 60.02 Changed Protein-arginine deiminase (PAD)
PadR PF03551 Family 33 8479 72.50 28 49.56 Changed Transcriptional regulator PadR-like family
PADR1 PF08063 Domain 17 187 54.70 41 6.18 Changed PADR1 (NUC008) domain
PAD_M PF08527 Domain 15 201 154.90 46 24.89 Changed Protein-arginine deiminase (PAD) middle domain
PAD_N PF08526 Domain 15 190 106.60 38 17.47 Changed Protein-arginine deiminase (PAD) N-terminal domain
PAD_porph PF04371 Family 22 1778 324.50 33 93.65 Changed Porphyromonas-type peptidyl-arginine deiminase
PAE PF03283 Family 27 583 274.10 26 69.61 Changed Pectinacetylesterase
PAF-AH_p_II PF03403 Family 7 427 295.60 23 70.00 Changed Platelet-activating factor acetylhydrolase, isoform II
Paf1 PF03985 Family 12 358 334.60 24 76.57 Changed Paf1
Paf67 PF10255 Family 26 467 296.80 40 76.52 Changed RNA polymerase I-associated factor PAF67
PAG PF15347 Family 5 46 401.30 61 99.17 New Phosphoprotein associated with glycosphingolipid-enriched
PAGK PF15284 Family 3 81 65.20 61 93.70 New Phage-encoded virulence factor
PagL PF09411 Family 51 691 139.70 20 62.70 Changed Lipid A 3-O-deacylase (PagL)
PagP PF07017 Family 10 610 143.80 76 77.22 Changed Antimicrobial peptide resistance and lipid A acylation protein PagP
PAH PF02671 Repeat 121 1587 48.30 34 10.07 Changed Paired amphipathic helix repeat
Paired_CXXCH_1 PF09699 Domain 178 1252 43.00 29 19.96 Changed Doubled CXXCH motif (Paired_CXXCH_1)
Pal1 PF08316 Family 21 213 110.00 38 26.42 Changed Pal1 cell morphology protein
PalH PF08733 Family 24 159 343.90 28 55.16 Changed PalH/RIM21
Palm_thioest PF02089 Domain 2 572 229.00 32 83.50 Changed Palmitoyl protein thioesterase
PALP PF00291 Family 148 31175 295.50 21 77.75 Changed Pyridoxal-phosphate dependent enzyme
Pam16 PF03656 Family 3 354 119.10 36 83.90 Changed Pam16
Pam17 PF08566 Family 24 137 173.70 40 77.72 Changed Mitochondrial import protein Pam17
PAM2 PF07145 Motif 53 834 17.60 49 3.57 Changed Ataxin-2 C-terminal region
Pantoate_ligase PF02569 Family 7 3517 268.30 42 94.43 Changed Pantoate-beta-alanine ligase
Pantoate_transf PF02548 Family 117 3509 255.50 45 92.45 Changed Ketopantoate hydroxymethyltransferase
PAN_1 PF00024 Domain 89 2217 80.20 16 20.08 Changed PAN domain
PAN_2 PF08276 Family 106 1792 65.90 34 10.50 Changed PAN-like domain
PAN_3 PF08277 Domain 43 345 69.90 22 24.54 Changed PAN-like domain
PAN_4 PF14295 Domain 64 1029 47.50 22 13.28 Changed PAN domain
Pan_kinase PF03309 Family 194 2298 197.40 29 75.38 Changed Type III pantothenate kinase
PaO PF08417 Family 29 296 97.40 26 20.94 Changed Pheophorbide a oxygenase
PAP1 PF08601 Family 10 181 264.60 22 57.66 Changed Transcription factor PAP1
PAP2 PF01569 Family 142 14398 132.00 19 47.04 Changed PAP2 superfamily
PAP2_3 PF14378 Family 12 684 172.80 19 49.31 Changed PAP2 superfamily
PAP2_C PF14360 Domain 54 511 72.40 38 19.26 Changed PAP2 superfamily C-terminal
PAPA-1 PF04795 Family 19 276 83.40 31 21.17 Changed PAPA-1-like conserved region
PapB PF03333 Family 14 275 87.40 42 78.55 Changed Adhesin biosynthesis transcription regulatory protein
PapC_C PF13953 Domain 301 5978 67.20 28 8.66 Changed PapC C-terminal domain
PapC_N PF13954 Domain 34 5788 143.60 29 18.18 Changed PapC N-terminal domain
PapD-like PF14874 Domain 5 621 86.70 17 7.00 New Flagellar-associated PapD-like
PapD_C PF02753 Domain 155 6654 65.10 26 28.05 Changed Pili assembly chaperone PapD, C-terminal domain
PapD_N PF00345 Domain 154 7954 119.70 30 51.71 Changed Pili and flagellar-assembly chaperone, PapD N-terminal domain
PapG_C PF03628 Domain 3 75 108.50 73 33.56 Changed PapG chaperone-binding domain
PapG_N PF03627 Domain 4 66 216.30 62 66.66 Changed PapG carbohydrate binding domain
Papilloma_E5 PF03025 Family 13 139 70.20 58 92.77 Changed Papillomavirus E5
Papilloma_E5A PF05776 Family 5 25 91.00 80 99.74 Changed Papillomavirus E5A protein
PapJ PF14855 Domain 3 54 178.40 63 99.69 New Pilus-assembly fibrillin subunit, chaperone
Papo_T_antigen PF02380 Family 10 268 85.00 40 54.97 Changed T-antigen specific domain
PAPS_reduct PF01507 Family 27 7027 185.10 24 61.61 Changed Phosphoadenosine phosphosulfate reductase family
PAP_assoc PF03828 Family 112 1402 60.60 28 8.69 Changed Cid1 family poly A polymerase
PAP_central PF04928 Domain 36 745 304.90 37 49.06 Changed Poly(A) polymerase central domain
Pap_E4 PF02711 Family 40 248 91.30 42 90.27 Changed E4 protein
PAP_fibrillin PF04755 Family 12 635 170.70 22 64.03 Changed PAP_fibrillin
PAP_PilO PF06864 Family 9 257 375.10 26 91.58 Changed Pilin accessory protein (PilO)
PAP_RNA-bind PF04926 Domain 54 630 146.80 29 22.62 Changed Poly(A) polymerase predicted RNA binding domain
PAR1 PF06521 Family 4 68 144.60 49 87.47 Changed PAR1 protein
ParA PF10609 Family 250 4990 81.20 48 23.71 Changed ParA/MinD ATPase like
Paralemmin PF03285 Family 6 266 209.00 26 60.43 Changed Paralemmin
Paramecium_SA PF01508 Domain 78 1822 63.40 27 47.23 Changed Paramecium surface antigen domain
Paramyxo_C PF01692 Family 4 36 194.90 70 97.69 Changed Paramyxovirus non-structural protein c
Paramyxo_ncap PF00973 Family 9 5874 180.70 74 97.00 Changed Paramyxovirus nucleocapsid protein
Paramyxo_NS_C PF02725 Family 6 123 164.30 72 90.13 Changed Non-structural protein C
Paramyxo_P PF01806 Domain 3 39 240.10 59 42.99 Changed Paramyxovirinae P phosphoprotein C-terminal region
Paramyxo_PCT PF14320 Domain 3 49 296.20 78 57.10 Changed Phosphoprotein P region PCT disordered
Paramyxo_PNT PF13825 Family 8 536 228.70 56 64.32 Changed Paramyxovirus structural protein V/P N-terminus
Paramyx_P_V_C PF03210 Family 21 673 161.50 42 37.80 Changed Paramyxovirus P/V phosphoprotein C-terminal
Parathyroid PF01279 Family 11 168 89.80 41 64.87 Changed Parathyroid hormone family
ParB PF08775 Domain 15 218 123.10 38 38.43 Changed ParB family
ParBc PF02195 Family 51 10329 91.10 27 28.42 Changed ParB-like nuclease domain
ParBc_2 PF08857 Domain 15 262 170.00 34 65.27 Changed Putative ParB-like nuclease
ParcG PF10274 Family 21 338 152.70 38 43.48 Changed Parkin co-regulated protein
ParD PF09386 Domain 4 38 77.80 61 92.81 Changed Antitoxin ParD
Pardaxin PF07425 Family 3 5 33.00 95 100.00 Changed Pardaxin
Parecho_VpG PF06344 Domain 4 49 20.00 88 0.92 Changed Parechovirus Genome-linked protein
PaREP1 PF05942 Family 116 500 112.80 25 72.44 Changed Archaeal PaREP1/PaREP8 family
PaRep2a PF07903 Family 8 34 80.20 53 72.37 Changed PaRep2a protein
PaRep2b PF07775 Family 15 107 199.00 21 57.96 Changed PaRep2b protein
ParG PF09274 Domain 3 92 66.00 30 86.74 Changed ParG
PARG_cat PF05028 Family 23 357 279.40 30 52.28 Changed Poly (ADP-ribose) glycohydrolase (PARG)
PARP PF00644 Family 28 1951 176.60 20 23.35 Changed Poly(ADP-ribose) polymerase catalytic domain
PARP_reg PF02877 Domain 35 515 135.40 33 17.01 Changed Poly(ADP-ribose) polymerase, regulatory domain
PARP_regulatory PF01358 Domain 6 111 256.90 44 70.01 Changed Poly A polymerase regulatory subunit
Parvo_coat PF00740 Family 24 3412 301.20 29 80.82 Changed Parvovirus coat protein VP2
Parvo_coat_N PF08398 Family 11 1185 57.20 59 11.36 Changed Parvovirus coat protein VP1
Parvo_NS1 PF01057 Family 24 1228 174.20 34 51.93 Changed Parvovirus non-structural protein NS1
PAS PF00989 Domain 49 15580 102.20 15 16.49 Changed PAS fold
PASTA PF03793 Domain 237 11616 62.10 23 21.30 Changed PASTA domain
PAS_10 PF13596 Domain 87 1751 107.80 26 18.13 Changed PAS domain
PAS_11 PF14598 Domain 22 2159 106.50 29 13.98 New PAS domain
PAS_2 PF08446 Domain 41 1308 101.80 37 12.43 Changed PAS fold
PAS_3 PF08447 Domain 122 12998 87.10 19 13.27 Changed PAS fold
PAS_4 PF08448 Domain 49 13956 109.70 16 17.36 Changed PAS fold
PAS_5 PF07310 Domain 10 302 135.90 26 68.99 Changed PAS domain
PAS_6 PF08348 Domain 36 1856 116.10 38 51.45 Changed YheO-like PAS domain
PAS_7 PF12860 Domain 164 2444 113.00 23 15.73 Changed PAS fold
PAS_8 PF13188 Domain 488 8124 67.80 15 10.70 Changed PAS domain
PAS_9 PF13426 Domain 245 26423 103.90 18 17.69 Changed PAS domain
Pas_Saposin PF09016 Domain 6 38 75.40 68 99.10 Changed Pas factor saposin fold
PAT1 PF09770 Family 17 499 425.60 16 81.25 Changed Topoisomerase II-associated protein PAT1
Patatin PF01734 Family 116 10726 181.80 20 39.60 Changed Patatin-like phospholipase
Patched PF02460 Family 9 2194 372.80 15 51.82 Changed Patched family
Pathogen_betaC1 PF09593 Domain 36 475 116.10 44 96.96 Changed Beta-satellite pathogenicity beta C1 protein
PAX PF00292 Domain 6 1629 115.90 67 31.76 Changed 'Paired box' domain
Pax2_C PF12403 Family 11 295 101.30 53 28.58 Changed Paired-box protein 2 C terminal
Pax7 PF12360 Family 12 179 44.40 70 9.66 Changed Paired box protein 7
Paxillin PF03535 Family 6 135 163.20 41 33.41 Changed Paxillin family
PAXIP1_C PF15364 Family 21 81 129.70 44 61.23 New PAXIP1-associated-protein-1 C term PTIP binding protein
PAXNEB PF05625 Family 30 316 338.60 25 89.19 Changed PAXNEB protein
PAZ PF02170 Family 55 1915 132.50 21 13.63 Changed PAZ domain
PAZ_siRNAbind PF12212 Domain 10 42 45.80 56 46.23 Changed Piwi/Argonaute/Zwille siRNA-binding domain
PA_decarbox PF05870 Family 8 316 152.10 50 91.04 Changed Phenolic acid decarboxylase (PAD)
PB1 PF00564 Domain 53 2276 83.30 18 13.97 Changed PB1 domain
PB1-F2 PF11986 Domain 24 10057 83.60 71 99.95 Changed Influenza A Proapoptotic protein
PBAN PF05874 Family 10 47 136.30 57 89.94 Changed Pheromone biosynthesis activating neuropeptide (PBAN)
PBC PF03792 Family 8 415 161.20 75 49.67 Changed PBC domain
PBCV_basic_adap PF08789 Domain 24 80 37.90 44 19.68 Changed PBCV-specific basic adaptor domain
PBD PF00786 Domain 44 1824 56.30 28 11.27 Changed P21-Rho-binding domain
PBP PF01161 Domain 128 4705 145.50 26 74.89 Changed Phosphatidylethanolamine-binding protein
PBP-Tp47_a PF14889 Domain 13 26 163.80 45 21.76 New Penicillin-binding protein Tp47 domain a
PBP-Tp47_c PF14888 Domain 14 25 159.30 51 20.57 New Penicillin-binding protein Tp47 domain C
PBP1_TM PF14812 Family 26 562 78.00 74 9.53 New Transmembrane domain of transglycosylase PBP1 at N-terminal
PBP5_C PF07943 Domain 74 4610 93.00 27 23.36 Changed Penicillin-binding protein 5, C-terminal domain
PBP_dimer PF03717 Domain 165 11499 176.10 24 27.45 Changed Penicillin-binding Protein dimerisation domain
PBP_GOBP PF01395 Domain 158 2289 116.50 15 75.34 Changed PBP/GOBP family
PBP_like PF12727 Family 186 867 188.80 29 45.74 Changed PBP superfamily domain
PBP_like_2 PF12849 Family 148 7526 251.70 21 78.69 Changed PBP superfamily domain
PBP_sp32 PF07222 Family 3 56 194.90 54 48.61 Changed Proacrosin binding protein sp32
PBS_linker_poly PF00427 Family 152 614 129.90 39 46.64 Changed Phycobilisome Linker polypeptide
PC-Esterase PF13839 Family 109 1574 250.40 20 56.82 Changed GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p
PC4 PF02229 Domain 203 1136 53.70 41 52.06 Changed Transcriptional Coactivator p15 (PC4)
PCAF_N PF06466 Domain 3 179 215.60 57 31.42 Changed PCAF (P300/CBP-associated factor) N-terminal domain
Pcc1 PF09341 Family 57 386 76.60 23 62.38 Changed Transcription factor Pcc1
PCDO_beta_N PF12391 Family 79 491 35.90 41 14.71 Changed Protocatechuate 3,4-dioxygenase beta subunit N terminal
PCEMA1 PF07418 Family 8 26 235.50 36 79.28 Changed Acidic phosphoprotein precursor PCEMA1
PcF PF09461 Domain 5 31 44.60 56 36.26 Changed Phytotoxin PcF protein
PcfJ PF14284 Family 32 550 152.40 26 36.54 Changed PcfJ-like protein
PcfK PF14058 Family 18 325 125.50 39 76.36 Changed PcfK-like protein
PCI PF01399 Family 77 4727 109.70 16 22.45 Changed PCI domain
PCIF1_WW PF12237 Family 14 172 167.70 39 24.91 Changed Phosphorylated CTD interacting factor 1 WW domain
PCI_Csn8 PF10075 Family 48 621 138.70 20 59.51 Changed COP9 signalosome, subunit CSN8
PCMT PF01135 Family 9 3573 199.20 32 79.48 Changed Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
PCNA_C PF02747 Domain 12 906 118.50 31 47.57 Changed Proliferating cell nuclear antigen, C-terminal domain
PCNA_N PF00705 Domain 13 917 118.30 32 46.62 Changed Proliferating cell nuclear antigen, N-terminal domain
PCNP PF15473 Family 11 113 125.80 61 77.26 New PEST, proteolytic signal-containing nuclear protein family
PCP PF02429 Domain 9 449 140.30 71 79.66 Changed Peridinin-chlorophyll A binding protein
PCP_red PF08369 Family 132 610 46.20 42 10.64 Changed Proto-chlorophyllide reductase 57 kD subunit
PcrB PF01884 Family 5 644 227.50 42 96.70 Changed PcrB family
PCRF PF03462 Domain 100 9136 113.30 38 32.37 Changed PCRF domain
PCYCGC PF13798 Family 13 157 151.10 54 89.50 Changed Protein of unknown function with PCYCGC motif
PC_rep PF01851 Repeat 157 1407 34.70 28 7.63 Changed Proteasome/cyclosome repeat
PD-C2-AF1 PF09310 Domain 2 69 197.40 55 86.37 Changed POU domain, class 2, associating factor 1
PD40 PF07676 Repeat 127 15082 34.90 24 15.47 Changed WD40-like Beta Propeller Repeat
Pdase_C33_assoc PF14756 Domain 4 550 108.70 91 8.18 New Peptidase_C33-associated domain
PDCD2_C PF04194 Domain 24 515 170.90 25 44.09 Changed Programmed cell death protein 2, C-terminal putative domain
PDCD9 PF07147 Family 14 222 322.20 25 75.44 Changed Mitochondrial 28S ribosomal protein S30 (PDCD9)
PDDEXK_1 PF12705 Domain 258 8235 244.70 14 25.38 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_2 PF12784 Domain 73 2282 177.50 20 76.61 Changed PD-(D/E)XK nuclease family transposase
PDDEXK_3 PF13366 Domain 106 398 110.60 36 80.21 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_4 PF14281 Domain 92 355 175.10 18 46.51 Changed PD-(D/E)XK nuclease superfamily
PDDEXK_5 PF11645 Family 2 21 133.70 33 94.51 Changed PD-(D/E)XK endonuclease
PDE6_gamma PF04868 Family 5 124 77.10 77 91.72 Changed Retinal cGMP phosphodiesterase, gamma subunit
PDE8 PF08629 Family 2 24 49.50 77 6.74 Changed PDE8 phosphodiesterase
PDEase_I PF00233 Domain 8 2707 218.10 32 32.64 Changed 3'5'-cyclic nucleotide phosphodiesterase
PDEase_II PF02112 Family 5 323 254.00 25 76.11 Changed cAMP phosphodiesterases class-II
PDEase_I_N PF08499 Family 6 248 59.40 69 10.83 Changed 3'5'-cyclic nucleotide phosphodiesterase N-terminal
PDGF PF00341 Domain 57 855 80.20 36 33.29 Changed PDGF/VEGF domain
PDGF_N PF04692 Family 10 162 73.90 43 34.82 Changed Platelet-derived growth factor, N terminal region
PDGLE PF13190 Domain 127 379 89.10 25 37.34 Changed PDGLE domain
PDH PF02153 Family 10 4258 243.70 25 69.28 Changed Prephenate dehydrogenase
PDR_assoc PF08370 Family 38 427 64.60 40 4.80 Changed Plant PDR ABC transporter associated
PDR_CDR PF06422 Family 167 1227 97.70 26 7.84 Changed CDR ABC transporter
PDT PF00800 Family 134 4375 177.50 33 54.29 Changed Prephenate dehydratase
PduL PF06130 Domain 125 1579 75.90 35 69.09 Changed Propanediol utilisation protein PduL
PduV-EutP PF10662 Domain 20 1157 127.50 43 87.54 Changed Ethanolamine utilisation - propanediol utilisation
PdxA PF04166 Family 16 2867 293.60 39 88.25 Changed Pyridoxal phosphate biosynthetic protein PdxA
PdxJ PF03740 Family 9 2100 235.70 50 96.84 Changed Pyridoxal phosphate biosynthesis protein PdxJ
PDZ PF00595 Domain 58 26099 80.30 22 16.19 Changed PDZ domain (Also known as DHR or GLGF)
PDZ_1 PF12812 Domain 34 382 76.80 30 13.96 Changed PDZ-like domain
PDZ_2 PF13180 Domain 52 19233 86.90 22 21.84 Changed PDZ domain
PDZ_assoc PF10600 Domain 12 321 65.50 53 8.76 Changed PDZ-associated domain of NMDA receptors
PE PF00934 Family 135 4012 90.80 46 26.20 Changed PE family
PE-PPE PF08237 Domain 32 715 213.70 31 45.55 Changed PE-PPE domain
Pea-VEAacid PF08111 Family 2 2 15.00 93 93.75 Changed Pea-VEAacid family
PEARLI-4 PF05278 Family 6 68 216.70 24 49.53 Changed Arabidopsis phospholipase-like protein (PEARLI 4)
Pecanex_C PF05041 Family 8 305 209.20 49 13.85 Changed Pecanex protein (C-terminus)
Pectate_lyase PF03211 Family 12 678 205.80 33 67.04 Changed Pectate lyase
Pectate_lyase22 PF14583 Domain 4 173 353.20 48 90.58 New Oligogalacturonate lyase
Pectate_lyase_2 PF06917 Family 5 122 490.50 53 98.49 Changed Periplasmic pectate lyase
Pectate_lyase_3 PF12708 Family 90 2481 234.90 16 41.55 Changed Pectate lyase superfamily protein
Pectinesterase PF01095 Family 35 2674 228.80 26 55.97 Changed Pectinesterase
Pec_lyase PF09492 Family 51 198 282.70 34 61.02 Changed Pectic acid lyase
Pec_lyase_C PF00544 Domain 10 1509 190.70 27 45.93 Changed Pectate lyase
Pec_lyase_N PF04431 Family 15 105 50.40 37 14.34 Changed Pectate lyase, N terminus
Pedibin PF08182 Family 4 5 32.20 49 8.64 Changed Pedibin/Hym-346 family
PEGA PF08308 Domain 32 1445 68.30 22 20.63 Changed PEGA domain
PEGSRP PF07623 Motif 6 15 26.50 76 24.92 Changed Protein of unknown function (DUF1584)
PEHE PF15275 Family 27 274 121.70 32 15.40 New PEHE domain
Pellino PF04710 Family 8 257 347.90 58 92.85 Changed Pellino
PELOTA_1 PF15608 Domain 65 343 102.60 39 24.86 New PELOTA RNA binding domain
PemK PF02452 Family 306 4707 106.10 23 83.07 Changed PemK-like protein
PEMT PF04191 Family 105 2350 101.80 20 45.04 Changed Phospholipid methyltransferase
PEN-2 PF10251 Family 11 135 92.60 43 78.83 Changed Presenilin enhancer-2 subunit of gamma secretase
Penaeidin PF05927 Family 8 55 72.10 65 97.04 Changed Penaeidin
Penicillinase_R PF03965 Family 47 2958 112.30 25 82.47 Changed Penicillinase repressor
Penicil_amidase PF01804 Family 21 1530 651.20 21 92.28 Changed Penicillin amidase
Pentapeptide PF00805 Repeat 95 11082 38.50 33 30.01 Changed Pentapeptide repeats (8 copies)
Pentapeptide_2 PF01469 Repeat 126 12308 40.00 46 47.97 Changed Pentapeptide repeats (8 copies)
Pentapeptide_3 PF13576 Repeat 230 524 48.40 27 19.80 Changed Pentapeptide repeats (9 copies)
Pentapeptide_4 PF13599 Repeat 86 6775 77.40 16 36.50 Changed Pentapeptide repeats (9 copies)
Pentaxin PF00354 Domain 9 1094 183.20 29 30.79 Changed Pentaxin family
PEP-utilisers_N PF05524 Family 186 5872 122.50 27 19.06 Changed PEP-utilising enzyme, N-terminal
PEP-utilizers PF00391 Family 179 11592 81.70 31 11.56 Changed PEP-utilising enzyme, mobile domain
PEP-utilizers_C PF02896 Domain 17 9485 301.30 34 43.25 Changed PEP-utilising enzyme, TIM barrel domain
Pep3_Vps18 PF05131 Family 31 318 145.80 26 15.40 Changed Pep3/Vps18/deep orange family
PEPcase PF00311 Family 65 4128 540.50 36 85.56 Changed Phosphoenolpyruvate carboxylase
PEPcase_2 PF14010 Family 27 105 495.80 36 99.07 Changed Phosphoenolpyruvate carboxylase
PEPCK PF00821 Family 56 2517 325.30 56 96.18 Changed Phosphoenolpyruvate carboxykinase
PEPCK_ATP PF01293 Family 128 2905 442.70 48 86.52 Changed Phosphoenolpyruvate carboxykinase
Pepsin-I3 PF06394 Domain 13 63 70.30 29 53.54 Changed Pepsin inhibitor-3-like repeated domain
PepSY PF03413 Domain 348 4684 65.70 19 24.77 Changed Peptidase propeptide and YPEB domain
PepSY_2 PF13670 Domain 83 928 80.40 22 77.90 Changed Peptidase propeptide and YPEB domain
PepSY_TM PF03929 Family 216 157 35.30 47 13.52 Changed PepSY-associated TM helix
PepSY_TM_1 PF13172 Family 183 2589 32.10 26 8.70 Changed PepSY-associated TM helix
PepSY_TM_2 PF13703 Domain 95 2542 87.60 25 18.15 Changed PepSY-associated TM helix
PepSY_TM_3 PF13706 Domain 99 885 36.90 30 8.04 Changed PepSY-associated TM helix
Peptidase_A17 PF05380 Family 8 650 127.10 25 12.22 Changed Pao retrotransposon peptidase
Peptidase_A21 PF03566 Family 5 29 607.00 68 93.74 Changed Peptidase family A21
Peptidase_A22B PF04258 Family 14 885 274.40 29 63.39 Changed Signal peptide peptidase
Peptidase_A24 PF01478 Family 103 5022 108.60 23 49.30 Changed Type IV leader peptidase family
Peptidase_A25 PF03418 Family 2 602 219.30 31 94.65 Changed Germination protease
Peptidase_A2B PF12384 Family 2 18 140.50 27 17.31 Changed Ty3 transposon peptidase
Peptidase_A2E PF12382 Family 2 4 137.00 90 10.28 Changed Retrotransposon peptidase
Peptidase_A3 PF02160 Family 6 102 173.90 29 22.75 Changed Cauliflower mosaic virus peptidase (A3)
Peptidase_A4 PF01828 Family 22 234 194.70 32 70.59 Changed Peptidase A4 family
Peptidase_A6 PF01829 Family 3 9 359.20 60 88.70 Changed Peptidase A6 family
Peptidase_A8 PF01252 Family 181 4771 151.40 31 88.98 Changed Signal peptidase (SPase) II
Peptidase_C1 PF00112 Domain 157 7017 199.90 29 53.16 Changed Papain family cysteine protease
Peptidase_C10 PF01640 Domain 53 317 176.30 29 29.83 Changed Peptidase C10 family
Peptidase_C11 PF03415 Family 7 367 328.40 17 58.43 Changed Clostripain family
Peptidase_C12 PF01088 Domain 72 1199 189.70 30 64.44 Changed Ubiquitin carboxyl-terminal hydrolase, family 1
Peptidase_C13 PF01650 Family 34 952 226.40 30 53.62 Changed Peptidase C13 family
Peptidase_C14 PF00656 Domain 115 4033 230.40 15 47.36 Changed Caspase domain
Peptidase_C15 PF01470 Domain 9 2041 185.10 39 88.92 Changed Pyroglutamyl peptidase
Peptidase_C16 PF01831 Family 2 113 244.20 70 4.43 Changed Peptidase C16 family
Peptidase_C1_2 PF03051 Family 13 1894 362.80 34 93.53 Changed Peptidase C1-like family
Peptidase_C2 PF00648 Family 9 2514 246.30 28 35.47 Changed Calpain family cysteine protease
Peptidase_C21 PF05381 Family 13 44 105.50 35 5.58 Changed Tymovirus endopeptidase
Peptidase_C23 PF05379 Domain 12 125 87.30 35 5.41 Changed Carlavirus endopeptidase
Peptidase_C24 PF03510 Family 5 118 103.30 42 5.21 Changed 2C endopeptidase (C24) cysteine protease family
Peptidase_C25 PF01364 Domain 77 266 362.10 21 31.09 Changed Peptidase family C25
Peptidase_C25_C PF03785 Domain 3 29 79.70 41 6.38 Changed Peptidase family C25, C terminal ig-like domain
Peptidase_C26 PF07722 Domain 45 3232 205.10 31 78.01 Changed Peptidase C26
Peptidase_C27 PF05407 Family 5 69 166.00 98 11.55 Changed Rubella virus endopeptidase
Peptidase_C28 PF05408 Family 4 452 200.20 80 11.04 Changed Foot-and-mouth virus L-proteinase
Peptidase_C3 PF00548 Family 20 4118 135.60 48 11.78 Changed 3C cysteine protease (picornain 3C)
Peptidase_C30 PF05409 Family 5 594 291.30 52 5.41 Changed Coronavirus endopeptidase C30
Peptidase_C31 PF05410 Family 3 229 105.00 92 4.26 Changed Porcine arterivirus-type cysteine proteinase alpha
Peptidase_C32 PF05411 Family 4 221 127.60 80 4.95 Changed Equine arteritis virus putative proteinase
Peptidase_C33 PF05412 Family 4 524 105.90 66 6.01 Changed Equine arterivirus Nsp2-type cysteine proteinase
Peptidase_C34 PF05413 Family 5 13 92.00 74 4.88 Changed Putative closterovirus papain-like endopeptidase
Peptidase_C36 PF05415 Family 2 8 103.90 76 4.92 Changed Beet necrotic yellow vein furovirus-type papain-like endopeptidase
Peptidase_C37 PF05416 Family 5 408 490.50 74 30.25 Changed Southampton virus-type processing peptidase
Peptidase_C39 PF03412 Family 36 3484 127.90 24 22.09 Changed Peptidase C39 family
Peptidase_C39_2 PF13529 Domain 127 2151 142.70 20 40.19 Changed Peptidase_C39 like family
Peptidase_C3G PF12381 Family 3 29 225.10 36 9.79 Changed Tungro spherical virus-type peptidase
Peptidase_C4 PF00863 Family 39 1088 226.80 49 9.57 Changed Peptidase family C4
Peptidase_C41 PF05417 Family 4 183 150.30 78 9.88 Changed Hepatitis E cysteine protease
Peptidase_C42 PF05533 Domain 8 200 73.20 66 10.95 Changed Beet yellows virus-type papain-like endopeptidase C42
Peptidase_C47 PF05543 Family 4 395 172.80 60 44.73 Changed Staphopain peptidase C47
Peptidase_C48 PF02902 Domain 27 3178 164.70 15 27.92 Changed Ulp1 protease family, C-terminal catalytic domain
Peptidase_C5 PF00770 Domain 13 133 176.50 66 88.43 Changed Adenovirus endoprotease
Peptidase_C50 PF03568 Family 18 368 306.50 25 21.85 Changed Peptidase family C50
Peptidase_C53 PF05550 Domain 11 688 153.70 75 17.82 Changed Pestivirus Npro endopeptidase C53
Peptidase_C54 PF03416 Family 14 700 260.10 32 62.57 Changed Peptidase family C54
Peptidase_C57 PF03290 Family 11 72 422.30 72 98.86 Changed Vaccinia virus I7 processing peptidase
Peptidase_C58 PF03543 Family 14 182 170.80 19 15.90 Changed Yersinia/Haemophilus virulence surface antigen
Peptidase_C6 PF00851 Family 19 1177 409.10 47 19.54 Changed Helper component proteinase
Peptidase_C62 PF12380 Family 2 13 284.00 95 6.70 Changed Gill-associated viral 3C-like peptidase
Peptidase_C65 PF10275 Family 33 450 211.80 28 59.13 Changed Peptidase C65 Otubain
Peptidase_C69 PF03577 Family 13 1802 354.50 29 76.08 Changed Peptidase family C69
Peptidase_C7 PF01830 Family 14 61 157.40 65 35.17 Changed Peptidase C7 family
Peptidase_C70 PF12385 Family 4 20 158.90 28 25.46 Changed Papain-like cysteine protease AvrRpt2
Peptidase_C71 PF12386 Family 3 4 145.50 33 55.48 Changed Pseudomurein endo-isopeptidase Pei
Peptidase_C74 PF12387 Family 6 178 181.60 71 6.17 Changed Pestivirus NS2 peptidase
Peptidase_C78 PF07910 Family 38 453 187.60 30 42.79 Changed Peptidase family C78
Peptidase_C8 PF03569 Family 2 18 161.60 79 15.59 Changed Peptidase family C8
Peptidase_C80 PF11713 Domain 23 303 155.10 33 7.28 Changed Peptidase C80 family
Peptidase_C9 PF01707 Family 8 257 192.80 66 8.58 Changed Peptidase family C9
Peptidase_C93 PF06035 Family 28 779 155.80 33 71.69 Changed Bacterial transglutaminase-like cysteine proteinase BTLCP
Peptidase_C97 PF05903 Domain 41 818 135.60 31 40.10 Changed PPPDE putative peptidase domain
Peptidase_C98 PF15499 Family 14 62 238.60 57 27.06 New Ubiquitin-specific peptidase-like, SUMO isopeptidase
Peptidase_G2 PF11962 Domain 19 176 206.70 42 34.28 Changed Peptidase_G2, IMC autoproteolytic cleavage domain
Peptidase_M1 PF01433 Family 33 7280 332.40 23 43.69 Changed Peptidase family M1
Peptidase_M10 PF00413 Domain 66 3213 160.90 27 39.87 Changed Matrixin
Peptidase_M10_C PF08548 Domain 15 432 201.30 36 37.88 Changed Peptidase M10 serralysin C terminal
Peptidase_M11 PF05548 Family 6 219 252.00 23 45.09 Changed Gametolysin peptidase M11
Peptidase_M13 PF01431 Family 21 3320 191.10 36 29.63 Changed Peptidase family M13
Peptidase_M13_N PF05649 Family 156 3507 342.10 22 54.54 Changed Peptidase family M13
Peptidase_M14 PF00246 Domain 114 5755 247.20 18 49.68 Changed Zinc carboxypeptidase
Peptidase_M15 PF01427 Family 5 2743 113.20 39 86.22 Changed D-ala-D-ala dipeptidase
Peptidase_M15_2 PF05951 Family 10 1137 149.00 54 64.95 Changed Bacterial protein of unknown function (DUF882)
Peptidase_M15_3 PF08291 Domain 19 623 110.70 24 47.23 Changed Peptidase M15
Peptidase_M15_4 PF13539 Family 215 1064 71.80 28 28.71 Changed D-alanyl-D-alanine carboxypeptidase
Peptidase_M16 PF00675 Family 26 11461 136.00 20 22.38 Changed Insulinase (Peptidase family M16)
Peptidase_M16_C PF05193 Domain 181 16090 179.20 14 37.15 Changed Peptidase M16 inactive domain
Peptidase_M17 PF00883 Domain 17 5342 304.00 41 63.96 Changed Cytosol aminopeptidase family, catalytic domain
Peptidase_M17_N PF02789 Domain 103 3629 122.30 21 24.73 Changed Cytosol aminopeptidase family, N-terminal domain
Peptidase_M18 PF02127 Family 9 1876 401.10 32 91.82 Changed Aminopeptidase I zinc metalloprotease (M18)
Peptidase_M19 PF01244 Family 48 2249 312.60 26 85.48 Changed Membrane dipeptidase (Peptidase family M19)
Peptidase_M2 PF01401 Family 6 802 468.30 35 85.85 Changed Angiotensin-converting enzyme
Peptidase_M20 PF01546 Family 366 29469 326.10 13 78.41 Changed Peptidase family M20/M25/M40
Peptidase_M22 PF00814 Family 113 9668 230.60 26 77.47 Changed Glycoprotease family
Peptidase_M23 PF01551 Family 276 16518 97.80 32 25.05 Changed Peptidase family M23
Peptidase_M24 PF00557 Domain 656 20523 218.60 23 58.35 Changed Metallopeptidase family M24
Peptidase_M26_C PF07580 Family 18 836 617.60 40 40.45 Changed M26 IgA1-specific Metallo-endopeptidase C-terminal region
Peptidase_M26_N PF05342 Family 19 698 240.30 39 13.51 Changed M26 IgA1-specific Metallo-endopeptidase N-terminal region
Peptidase_M27 PF01742 Family 13 216 366.70 42 32.95 Changed Clostridial neurotoxin zinc protease
Peptidase_M28 PF04389 Family 65 5682 184.50 20 35.77 Changed Peptidase family M28
Peptidase_M29 PF02073 Family 73 2095 367.30 34 92.86 Changed Thermophilic metalloprotease (M29)
Peptidase_M3 PF01432 Family 29 8043 390.10 24 63.94 Changed Peptidase family M3
Peptidase_M30 PF10460 Family 6 71 301.10 24 54.19 Changed Peptidase M30
Peptidase_M32 PF02074 Family 3 1205 472.10 36 95.91 Changed Carboxypeptidase Taq (M32) metallopeptidase
Peptidase_M35 PF02102 Family 4 234 281.40 31 91.47 Changed Deuterolysin metalloprotease (M35) family
Peptidase_M36 PF02128 Family 31 458 321.30 31 49.08 Changed Fungalysin metallopeptidase (M36)
Peptidase_M3_N PF08439 Family 182 3235 68.60 25 11.49 Changed Oligopeptidase F
Peptidase_M4 PF01447 Domain 13 1948 143.00 32 26.78 Changed Thermolysin metallopeptidase, catalytic domain
Peptidase_M41 PF01434 Family 31 7039 203.00 39 31.13 Changed Peptidase family M41
Peptidase_M42 PF05343 Family 69 4278 284.40 30 81.45 Changed M42 glutamyl aminopeptidase
Peptidase_M43 PF05572 Family 5 563 143.40 28 22.67 Changed Pregnancy-associated plasma protein-A
Peptidase_M44 PF03410 Family 3 79 519.90 70 99.81 Changed Protein G1
Peptidase_M48 PF01435 Family 21 10571 215.40 20 61.15 Changed Peptidase family M48
Peptidase_M49 PF03571 Family 27 706 347.00 24 67.47 Changed Peptidase family M49
Peptidase_M4_C PF02868 Domain 113 1990 152.70 37 28.88 Changed Thermolysin metallopeptidase, alpha-helical domain
Peptidase_M50 PF02163 Family 68 8451 283.10 20 78.45 Changed Peptidase family M50
Peptidase_M50B PF13398 Family 100 639 197.80 26 80.07 Changed Peptidase M50B-like
Peptidase_M54 PF07998 Family 5 267 127.40 29 50.09 Changed Peptidase family M54
Peptidase_M55 PF04951 Family 41 469 259.60 34 95.97 Changed D-aminopeptidase
Peptidase_M56 PF05569 Domain 12 1807 241.60 19 47.77 Changed BlaR1 peptidase M56
Peptidase_M57 PF12388 Family 5 69 198.00 31 60.86 Changed Dual-action HEIGH metallo-peptidase
Peptidase_M6 PF05547 Domain 5 820 459.10 29 56.97 Changed Immune inhibitor A peptidase M6
Peptidase_M61 PF05299 Family 10 668 119.60 40 20.25 Changed M61 glycyl aminopeptidase
Peptidase_M64 PF09471 Family 14 251 241.70 28 47.19 Changed IgA Peptidase M64
Peptidase_M66 PF10462 Family 15 252 293.50 42 30.59 Changed Peptidase M66
Peptidase_M7 PF02031 Domain 4 82 131.00 48 61.41 Changed Streptomyces extracellular neutral proteinase (M7) family
Peptidase_M73 PF12389 Family 2 432 171.20 43 87.42 Changed Camelysin metallo-endopeptidase
Peptidase_M74 PF03411 Family 3 916 237.60 59 82.86 Changed Penicillin-insensitive murein endopeptidase
Peptidase_M75 PF09375 Family 169 1931 267.80 27 74.43 Changed Imelysin
Peptidase_M76 PF09768 Family 29 315 167.90 37 67.56 Changed Peptidase M76 family
Peptidase_M8 PF01457 Family 8 1086 328.90 21 71.05 Changed Leishmanolysin
Peptidase_M85 PF13678 Family 8 95 246.90 84 71.65 Changed NFkB-p65-degrading zinc protease
Peptidase_M9 PF01752 Family 7 608 282.40 35 35.67 Changed Collagenase
Peptidase_M90 PF06167 Family 74 1002 237.40 45 88.21 Changed Glucose-regulated metallo-peptidase M90
Peptidase_M91 PF14891 Family 13 118 175.40 23 37.51 New Effector protein
Peptidase_M9_N PF08453 Family 34 561 179.60 32 22.09 Changed Peptidase family M9 N-terminal
Peptidase_MA_2 PF13485 Domain 226 1955 137.20 14 25.04 Changed Peptidase MA superfamily
Peptidase_S10 PF00450 Domain 67 3902 353.80 21 80.72 Changed Serine carboxypeptidase
Peptidase_S11 PF00768 Domain 12 8726 235.10 31 61.21 Changed D-alanyl-D-alanine carboxypeptidase
Peptidase_S13 PF02113 Family 9 2907 317.50 25 88.36 Changed D-Ala-D-Ala carboxypeptidase 3 (S13) family
Peptidase_S15 PF02129 Family 48 2545 265.50 22 43.65 Changed X-Pro dipeptidyl-peptidase (S15 family)
Peptidase_S21 PF00716 Family 11 192 280.20 30 49.47 Changed Assemblin (Peptidase family S21)
Peptidase_S24 PF00717 Domain 228 17337 72.80 24 32.79 Changed Peptidase S24-like
Peptidase_S26 PF10502 Domain 32 3046 93.00 32 34.94 Changed Signal peptidase, peptidase S26
Peptidase_S28 PF05577 Family 12 1264 339.30 23 80.92 Changed Serine carboxypeptidase S28
Peptidase_S29 PF02907 Domain 9 8309 144.80 87 19.64 Changed Hepatitis C virus NS3 protease
Peptidase_S3 PF00944 Domain 5 862 104.80 71 12.60 Changed Alphavirus core protein
Peptidase_S30 PF01577 Family 26 1446 212.30 29 12.60 Changed Potyvirus P1 protease
Peptidase_S31 PF05578 Family 4 226 175.10 90 7.31 Changed Pestivirus NS3 polyprotein peptidase S31
Peptidase_S32 PF05579 Family 6 275 299.70 70 11.60 Changed Equine arteritis virus serine endopeptidase S32
Peptidase_S37 PF05576 Family 2 98 421.20 41 91.66 Changed PS-10 peptidase S37
Peptidase_S39 PF02122 Family 15 486 164.30 35 39.72 Changed Peptidase S39
Peptidase_S41 PF03572 Family 142 9366 171.70 27 34.34 Changed Peptidase family S41
Peptidase_S46 PF10459 Family 61 519 661.60 34 96.35 Changed Peptidase S46
Peptidase_S48 PF03574 Family 4 138 146.60 84 79.25 Changed Peptidase family S48
Peptidase_S49 PF01343 Family 20 6794 149.70 26 46.31 Changed Peptidase family S49
Peptidase_S49_N PF08496 Family 68 1104 149.80 52 44.51 Changed Peptidase family S49 N-terminal
Peptidase_S51 PF03575 Family 24 2034 152.20 25 62.84 Changed Peptidase family S51
Peptidase_S55 PF05580 Family 6 510 195.60 43 45.24 Changed SpoIVB peptidase S55
Peptidase_S58 PF03576 Family 108 1255 314.80 32 91.85 Changed Peptidase family S58
Peptidase_S6 PF02395 Family 9 1016 454.70 25 57.43 Changed Immunoglobulin A1 protease
Peptidase_S64 PF08192 Family 9 71 457.00 26 72.60 Changed Peptidase family S64
Peptidase_S66 PF02016 Family 167 2826 284.20 28 90.74 Changed LD-carboxypeptidase
Peptidase_S68 PF10461 Family 2 40 33.40 66 4.02 Changed Peptidase S68
Peptidase_S7 PF00949 Family 50 3378 149.10 68 4.59 Changed Peptidase S7, Flavivirus NS3 serine protease
Peptidase_S74 PF13884 Domain 244 1011 57.10 29 7.10 Changed Chaperone of endosialidase
Peptidase_S76 PF13611 Domain 6 57 123.60 34 5.04 Changed Serine peptidase of plant viral polyprotein, P1
Peptidase_S8 PF00082 Domain 63 15113 299.50 19 44.44 Changed Subtilase family
Peptidase_S80 PF07230 Family 11 1179 203.10 65 98.50 Changed Bacteriophage T4-like capsid assembly protein (Gp20)
Peptidase_S9 PF00326 Family 70 9052 202.90 21 30.52 Changed Prolyl oligopeptidase family
Peptidase_S9_N PF02897 Domain 30 3044 371.10 22 55.84 Changed Prolyl oligopeptidase, N-terminal beta-propeller domain
Peptidase_U32 PF01136 Family 166 7851 231.70 27 57.79 Changed Peptidase family U32
Peptidase_U35 PF04586 Family 36 1699 154.10 23 52.03 Changed Caudovirus prohead protease
Peptidase_U35_2 PF14550 Family 35 118 123.60 35 38.81 New Putative phage protease XkdF
Peptidase_U4 PF03419 Family 34 409 271.70 27 96.09 Changed Sporulation factor SpoIIGA
Peptidase_U40 PF10464 Family 2 29 171.00 92 96.88 Changed Peptidase U40
Peptidase_U49 PF10463 Family 7 29 181.90 20 57.80 Changed Peptidase U49
Peptidase_U57 PF05582 Family 25 309 268.90 49 98.65 Changed YabG peptidase U57
Peptidase_U9 PF03420 Family 2 91 196.80 38 87.65 Changed Prohead core protein protease
Pept_tRNA_hydro PF01195 Domain 116 4825 180.00 38 92.48 Changed Peptidyl-tRNA hydrolase
PepX_C PF08530 Domain 53 2418 229.10 17 35.97 Changed X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
PepX_N PF09168 Domain 24 510 141.70 47 19.29 Changed X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
Pep_deformylase PF01327 Domain 130 7120 154.60 34 87.31 Changed Polypeptide deformylase
Pep_M12B_propep PF01562 Family 119 2978 126.10 24 15.43 Changed Reprolysin family propeptide
PEP_mutase PF13714 Domain 124 2953 240.70 35 79.80 Changed Phosphoenolpyruvate phosphomutase
Per1 PF04080 Family 34 346 246.10 35 77.58 Changed Per1-like
PerB PF06590 Family 2 14 102.70 94 100.00 Changed PerB protein
PerC PF06069 Family 4 532 72.20 37 68.03 Changed PerC transcriptional activator
Pericardin_rpt PF07054 Repeat 5 240 33.30 73 44.13 Changed Pericardin like repeat
Perilipin PF03036 Family 17 474 278.60 26 73.43 Changed Perilipin family
Period_C PF12114 Family 24 250 189.60 38 17.03 Changed Period protein 2/3C-terminal region
Peripla_BP_1 PF00532 Domain 6 5137 255.60 21 79.54 Changed Periplasmic binding proteins and sugar binding domain of LacI family
Peripla_BP_2 PF01497 Domain 33 15783 233.80 16 72.71 Changed Periplasmic binding protein
Peripla_BP_3 PF13377 Domain 246 26367 160.60 23 47.18 Changed Periplasmic binding protein-like domain
Peripla_BP_4 PF13407 Family 173 12924 255.70 20 75.86 Changed Periplasmic binding protein domain
Peripla_BP_5 PF13433 Domain 64 1016 355.80 48 85.60 Changed Periplasmic binding protein domain
Peripla_BP_6 PF13458 Family 259 10778 334.70 19 81.74 Changed Periplasmic binding protein
Periviscerokin PF08259 Family 3 195 10.90 75 99.16 Changed Periviscerokinin family
Perm-CXXC PF15629 Family 10 47 31.40 54 2.09 New Permuted single zf-CXXC unit
Permease PF02405 Family 267 4359 214.40 33 75.29 Changed Permease
peroxidase PF00141 Family 162 7995 260.20 25 77.65 Changed Peroxidase
Peroxidase_2 PF01328 Family 2 357 183.60 23 63.07 Changed Peroxidase, family 2
Peroxin-13_N PF04088 Family 29 243 154.00 37 39.23 Changed Peroxin 13, N-terminal region
Peroxin-22 PF12827 Family 17 42 120.70 32 66.90 Changed Peroxisomal biogenesis protein family
Peroxin-3 PF04882 Family 32 408 283.60 23 86.51 Changed Peroxin-3
Pertactin PF03212 Family 8 2661 114.80 27 13.74 Changed Pertactin
Pertus-S4-tox PF09275 Domain 2 5 110.00 99 72.37 Changed Pertussis toxin S4 subunit
Pertus-S5-tox PF09276 Domain 2 5 97.00 96 75.90 Changed Pertussis toxin S5 subunit
Pertussis_S1 PF02917 Domain 2 121 179.80 46 59.63 Changed Pertussis toxin, subunit 1
Pertussis_S2S3 PF02918 Domain 3 72 109.00 71 70.55 Changed Pertussis toxin, subunit 2 and 3, C-terminal domain
Pes-10 PF07149 Family 5 17 278.90 21 92.35 Changed Pes-10
Pescadillo_N PF06732 Family 9 361 258.90 46 46.38 Changed Pescadillo N-terminus
PET PF06297 Domain 18 570 98.40 44 17.57 Changed PET Domain
PET122 PF05476 Family 5 30 249.50 45 89.80 Changed PET122
Pet127 PF08634 Domain 11 147 272.20 48 34.04 Changed Mitochondrial protein Pet127
Pet191_N PF10203 Family 33 259 64.60 39 59.86 Changed Cytochrome c oxidase assembly protein PET191
Pet20 PF08692 Family 6 105 97.30 28 44.10 Changed Mitochondrial protein Pet20
PetG PF02529 Family 17 647 35.10 81 95.05 Changed Cytochrome B6-F complex subunit 5
PetL PF05115 Family 28 723 30.30 69 83.62 Changed Cytochrome B6-F complex subunit VI (PetL)
PetM PF08041 Family 21 131 31.40 46 45.33 Changed PetM family of cytochrome b6f complex subunit 7
PetN PF03742 Family 22 1420 25.50 91 97.19 Changed PetN
PEX-1N PF09262 Domain 32 271 81.00 35 7.38 Changed Peroxisome biogenesis factor 1, N-terminal
PEX-2N PF09263 Domain 2 52 83.50 64 7.17 Changed Peroxisome biogenesis factor 1, N-terminal
PEX11 PF05648 Family 61 883 206.20 18 85.16 Changed Peroxisomal biogenesis factor 11 (PEX11)
Pex14_N PF04695 Family 53 413 121.40 28 31.63 Changed Peroxisomal membrane anchor protein (Pex14p) conserved region
Pex16 PF08610 Family 18 280 296.50 26 84.37 Changed Peroxisomal membrane protein (Pex16)
Pex19 PF04614 Family 27 341 236.60 24 75.49 Changed Pex19 protein family
Pex24p PF06398 Family 54 690 261.70 22 35.45 Changed Integral peroxisomal membrane peroxin
Pex26 PF07163 Family 3 66 266.40 54 93.40 Changed Pex26 protein
Pex2_Pex12 PF04757 Family 113 868 218.00 17 58.58 Changed Pex2 / Pex12 amino terminal region
PE_PPE_C PF12484 Family 86 1529 84.80 32 22.29 Changed Polymorphic PE/PPE proteins C terminal
PFEMP PF03011 Domain 41 832 120.50 28 18.86 Changed PFEMP DBL domain
Pfg27 PF09216 Domain 2 7 176.60 49 44.52 Changed Pfg27
PFK PF00365 Domain 12 6795 268.50 35 74.02 Changed Phosphofructokinase
PfkB PF00294 Family 64 26513 285.90 18 86.51 Changed pfkB family carbohydrate kinase
PFL PF02901 Family 129 4920 572.20 38 79.76 Changed Pyruvate formate lyase
PFO_beta_C PF12367 Family 69 635 70.40 42 24.41 Changed Pyruvate ferredoxin oxidoreductase beta subunit C terminal
PFU PF09070 Domain 39 348 111.50 39 15.52 Changed PFU (PLAA family ubiquitin binding)
PfUIS3 PF11567 Family 2 9 97.60 57 46.07 Changed Plasmodium falciparum UIS3 membrane protein
Pga1 PF10333 Family 5 47 180.10 31 85.69 Changed GPI-Mannosyltransferase II co-activator
PGA2 PF07543 Family 6 125 112.90 28 84.02 Changed Protein trafficking PGA2
PgaD PF13994 Family 34 382 123.60 45 83.02 Changed PgaD-like protein
PGAMP PF07644 Family 4 8 34.80 52 15.43 Changed Planctomycete PGAMP
PGAP1 PF07819 Family 20 1253 153.30 17 24.56 Changed PGAP1-like protein
PGA_cap PF09587 Domain 181 2048 235.10 26 60.66 Changed Bacterial capsule synthesis protein PGA_cap
PGBA_C PF15437 Family 7 118 85.50 60 25.41 New Plasminogen-binding protein pgbA C-terminal
PGBA_N PF15436 Family 27 196 213.50 51 74.30 New Plasminogen-binding protein pgbA N-terminal
PGC7_Stella PF15549 Family 11 48 155.40 37 88.99 New PGC7/Stella/Dppa3 domain
PGDYG PF14083 Family 6 78 101.70 77 69.33 Changed PGDYG protein
PGG PF13962 Domain 259 1615 108.80 26 29.59 Changed Domain of unknown function
PGI PF00342 Domain 10 7325 366.00 35 89.39 Changed Phosphoglucose isomerase
PGK PF00162 Domain 154 5701 364.90 46 93.99 Changed Phosphoglycerate kinase
PglZ PF08665 Domain 16 530 178.40 25 24.53 Changed PglZ domain
PGM_PMM_I PF02878 Domain 89 14497 133.00 29 27.44 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
PGM_PMM_II PF02879 Domain 98 14085 103.50 26 21.14 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
PGM_PMM_III PF02880 Domain 584 13734 115.60 24 23.67 Changed Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
PGM_PMM_IV PF00408 Family 112 12833 81.50 20 16.51 Changed Phosphoglucomutase/phosphomannomutase, C-terminal domain
PgpA PF04608 Family 172 2384 145.30 32 86.26 Changed Phosphatidylglycerophosphatase A
PGPGW PF09656 Family 29 301 51.40 35 34.98 Changed Putative transmembrane protein (PGPGW)
PGP_phosphatase PF09419 Family 16 326 152.60 27 70.39 Changed Mitochondrial PGP phosphatase
PG_binding_1 PF01471 Domain 237 10090 56.00 25 14.51 Changed Putative peptidoglycan binding domain
PG_binding_2 PF08823 Domain 9 96 69.20 26 22.05 Changed Putative peptidoglycan binding domain
PG_binding_3 PF09374 Domain 20 823 75.60 34 37.79 Changed Predicted Peptidoglycan domain
PG_binding_4 PF12229 Domain 117 1823 115.10 15 32.20 Changed Putative peptidoglycan binding domain
PH PF00169 Domain 133 16347 107.30 17 13.94 Changed PH domain
Ph1570 PF09638 Domain 4 13 152.10 56 97.29 Changed Ph1570 protein
PHA-1 PF06542 Family 8 118 344.80 28 74.95 Changed Regulator protein PHA-1
PhaC_N PF07167 Family 37 1217 145.90 45 28.33 Changed Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
Phage-A118_gp45 PF10653 Family 2 34 60.50 87 100.00 Changed Protein gp45 of Bacteriophage A118
Phage-Gp8 PF09215 Domain 10 76 281.80 34 83.52 Changed Bacteriophage T4, Gp8
Phage-MuB_C PF09077 Domain 15 110 77.00 46 25.15 Changed Mu B transposition protein, C terminal
Phage-scaffold PF09306 Domain 2 104 273.20 52 92.96 Changed Bacteriophage, scaffolding protein
Phage-tail_1 PF09097 Domain 5 31 194.80 57 49.04 Changed Baseplate structural protein, domain 1
Phage-tail_2 PF09096 Domain 6 29 166.00 58 42.44 Changed Baseplate structural protein, domain 2
Phage-tail_3 PF13550 Domain 106 1924 159.10 38 15.89 Changed Putative phage tail protein
PhageMin_Tail PF10145 Family 185 2672 209.40 19 20.43 Changed Phage-related minor tail protein
PhageP22-tail PF09251 Domain 6 48 509.60 79 82.26 Changed Salmonella phage P22 tail-spike
Phageshock_PspD PF09584 Family 7 520 63.30 79 86.29 Changed Phage shock protein PspD (Phageshock_PspD)
Phageshock_PspG PF09583 Family 13 608 64.50 71 79.78 Changed Phage shock protein G (Phageshock_PspG)
Phage_1_1 PF08200 Family 6 29 42.50 49 88.58 Changed Bacteriophage 1.1 Protein
Phage_30_3 PF08010 Family 5 72 149.50 59 98.28 Changed Bacteriophage protein GP30.3
Phage_30_8 PF06019 Family 2 31 112.20 68 99.49 Changed Phage GP30.8 protein
Phage_AlpA PF05930 Family 23 2885 49.80 31 65.72 Changed Prophage CP4-57 regulatory protein (AlpA)
Phage_antitermQ PF06530 Family 4 887 118.00 44 91.35 Changed Phage antitermination protein Q
Phage_antiter_Q PF06323 Family 9 404 214.30 70 99.44 Changed Phage antitermination protein Q
Phage_ASH PF10554 Family 19 596 95.40 36 41.17 Changed Ash protein family
Phage_attach PF05354 Domain 6 548 112.70 74 98.42 Changed Phage Head-Tail Attachment
Phage_B PF02304 Family 6 76 115.60 64 97.99 Changed Scaffold protein B
Phage_base_V PF04717 Family 71 4590 90.00 34 15.09 Changed Phage-related baseplate assembly protein
Phage_BR0599 PF09356 Family 73 343 76.40 37 28.73 Changed Phage conserved hypothetical protein BR0599
Phage_C PF12025 Family 3 67 65.40 71 83.07 Changed Phage protein C
Phage_capsid PF05065 Family 189 3200 261.30 16 68.16 Changed Phage capsid family
Phage_Capsid_P3 PF09018 Domain 3 7 394.00 100 99.75 Changed P3 major capsid protein
Phage_cap_E PF03864 Family 77 1242 301.00 29 96.11 Changed Phage major capsid protein E
Phage_cap_P2 PF05125 Family 5 788 308.10 45 94.81 Changed Phage major capsid protein, P2 family
Phage_CII PF05269 Family 3 497 84.00 41 89.93 Changed Bacteriophage CII protein
Phage_CI_repr PF07022 Domain 14 693 63.90 28 33.13 Changed Bacteriophage CI repressor helix-turn-helix domain
Phage_coat PF09063 Domain 2 2 127.00 96 99.61 Changed Phage PP7 coat protein
Phage_Coat_A PF05357 Domain 3 41 63.30 45 24.64 Changed Phage Coat Protein A
Phage_Coat_B PF05356 Family 2 14 80.70 65 99.56 Changed Phage Coat protein B
Phage_Coat_Gp8 PF05371 Family 7 29 51.20 51 69.77 Changed Phage major coat protein, Gp8
Phage_connector PF05352 Family 4 23 271.50 30 88.42 Changed Phage Connector (GP10)
Phage_connect_1 PF05135 Domain 81 1873 94.80 16 85.42 Changed Phage gp6-like head-tail connector protein
Phage_Cox PF10743 Family 6 218 81.20 49 85.59 Changed Regulatory phage protein cox
Phage_CP76 PF06892 Family 15 350 153.50 44 91.22 Changed Phage regulatory protein CII (CP76)
Phage_CRI PF05144 Family 13 166 238.00 25 63.01 Changed Phage replication protein CRI
Phage_DNA_bind PF02303 Domain 3 81 84.70 33 88.25 Changed Helix-destabilising protein
Phage_DsbA PF11126 Family 7 36 68.50 52 76.26 Changed Transcriptional regulator DsbA
Phage_endo_I PF05367 Domain 6 64 136.50 49 98.32 Changed Phage endonuclease I
Phage_F PF02305 Domain 7 248 229.10 36 98.46 Changed Capsid protein (F protein)
Phage_fiber PF03335 Repeat 38 2424 13.50 43 14.97 Changed Phage tail fibre repeat
Phage_fiber_2 PF03406 Repeat 50 1985 43.20 57 13.82 Changed Phage tail fibre repeat
Phage_fiber_C PF06820 Family 2 1275 62.30 64 34.03 Changed Putative prophage tail fibre C-terminus
Phage_FRD3 PF05798 Family 4 35 75.30 80 99.28 Changed Bacteriophage FRD3 protein
Phage_G PF02306 Domain 6 79 173.40 60 100.00 Changed Major spike protein (G protein)
Phage_glycop_gL PF11108 Family 9 36 109.10 32 71.22 Changed Viral glycoprotein L
Phage_Gp111 PF07410 Family 2 14 98.30 43 76.44 Changed Streptococcus thermophilus bacteriophage Gp111 protein
Phage_Gp14 PF10666 Family 2 24 127.00 72 98.20 Changed Phage protein Gp14
Phage_Gp15 PF06854 Family 9 188 160.00 27 87.85 Changed Bacteriophage Gp15 protein
Phage_Gp19 PF09355 Domain 8 161 113.30 32 84.71 Changed Phage protein Gp19/Gp15/Gp42
Phage_GP20 PF06810 Family 21 296 154.40 25 79.64 Changed Phage minor structural protein GP20
Phage_Gp23 PF10669 Family 3 16 120.90 88 55.90 Changed Protein gp23 (Bacteriophage A118)
Phage_gp49_66 PF13876 Family 52 176 88.40 41 69.80 Changed Phage protein (N4 Gp49/phage Sf6 gene 66) family
Phage_gp53 PF11246 Family 12 70 187.90 33 87.24 Changed Base plate wedge protein 53
Phage_GPA PF05840 Family 11 1036 329.10 36 50.68 Changed Bacteriophage replication gene A protein (GPA)
Phage_GPD PF05954 Family 283 5310 285.80 18 48.10 Changed Phage late control gene D protein (GPD)
Phage_GPL PF05926 Family 33 714 136.30 41 87.08 Changed Phage head completion protein (GPL)
Phage_GPO PF05929 Family 5 734 255.80 42 93.46 Changed Phage capsid scaffolding protein (GPO) serine peptidase
Phage_head_chap PF11113 Family 10 33 55.70 46 51.23 Changed Head assembly gene product
Phage_head_fibr PF11133 Family 3 66 123.30 22 66.00 Changed Head fiber protein
Phage_HK97_TLTM PF06120 Family 2 304 245.40 55 27.07 Changed Tail length tape measure protein
Phage_holin PF04688 Family 24 332 44.80 42 47.79 Changed Phage lysis protein, holin
Phage_holin_1 PF04531 Family 23 523 78.90 39 81.28 Changed Bacteriophage holin
Phage_holin_2 PF04550 Family 6 181 89.80 62 93.82 Changed Phage holin family 2
Phage_holin_3 PF05106 Family 25 643 96.80 31 90.20 Changed Phage holin family (Lysis protein S)
Phage_holin_4 PF05105 Family 57 986 117.20 29 83.22 Changed Holin family
Phage_holin_5 PF06946 Family 2 44 88.70 41 94.32 Changed Phage holin
Phage_holin_6 PF10746 Family 4 52 62.70 52 94.44 Changed Phage holin family 6
Phage_holin_T PF11031 Family 5 43 200.40 49 98.42 Changed Bacteriophage T holin
Phage_hub_GP28 PF11110 Family 6 31 148.30 46 84.65 Changed Baseplate hub distal subunit
Phage_H_T_join PF05521 Family 131 1460 96.10 18 85.37 Changed Phage head-tail joining protein
Phage_integrase PF00589 Family 35 44346 168.00 19 51.02 Changed Phage integrase family
Phage_Integr_2 PF13009 Family 22 56 318.40 30 34.49 Changed Putative phage integrase
Phage_integ_N PF09003 Domain 17 707 71.50 43 19.78 Changed Bacteriophage lambda integrase, N-terminal domain
Phage_int_SAM_1 PF02899 Domain 37 10422 83.20 22 26.81 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_2 PF12834 Domain 22 357 87.30 33 31.33 Changed Phage integrase, N-terminal
Phage_int_SAM_3 PF14659 Domain 221 5045 57.40 19 15.31 New Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_4 PF13495 Domain 83 3438 84.40 20 27.95 Changed Phage integrase, N-terminal SAM-like domain
Phage_int_SAM_5 PF13102 Domain 60 914 145.40 17 38.17 Changed Phage integrase SAM-like domain
Phage_lambda_P PF06992 Family 2 541 200.50 54 94.62 Changed Replication protein P
Phage_lambd_GpG PF06894 Family 7 773 122.70 54 90.90 Changed Bacteriophage lambda minor tail protein (GpG)
Phage_lysis PF03245 Domain 30 1696 120.20 51 80.99 Changed Bacteriophage Rz lysis protein
Phage_lysozyme PF00959 Domain 18 3255 110.60 29 59.84 Changed Phage lysozyme
Phage_mat-A PF03863 Family 11 306 218.90 48 94.72 Changed Phage maturation protein
Phage_min_cap2 PF06152 Family 9 238 309.60 23 78.56 Changed Phage minor capsid protein 2
Phage_min_tail PF05939 Family 33 1252 107.20 47 95.89 Changed Phage minor tail protein
Phage_Mu_F PF04233 Family 13 1923 114.20 19 30.44 Changed Phage Mu protein F like protein
Phage_Mu_Gam PF07352 Family 27 345 146.00 27 85.80 Changed Bacteriophage Mu Gam like protein
Phage_Mu_Gp45 PF06890 Family 8 376 162.70 32 86.85 Changed Bacteriophage Mu Gp45 protein
Phage_NinH PF06322 Family 4 231 62.60 66 96.08 Changed Phage NinH protein
Phage_Nu1 PF07471 Family 11 762 138.20 50 83.26 Changed Phage DNA packaging protein Nu1
Phage_Orf51 PF06194 Family 3 378 75.10 89 98.57 Changed Phage Conserved Open Reading Frame 51
Phage_P2_GpE PF06528 Family 17 525 39.10 54 85.46 Changed Phage P2 GpE
Phage_P2_GpU PF06995 Family 55 1047 118.70 37 69.33 Changed Phage P2 GpU
Phage_portal PF04860 Family 127 3192 315.20 19 80.95 Changed Phage portal protein
Phage_portal_2 PF05136 Family 62 1366 316.40 34 69.92 Changed Phage portal protein, lambda family
Phage_pRha PF09669 Family 122 1673 87.90 27 38.68 Changed Phage regulatory protein Rha (Phage_pRha)
Phage_prot_Gp6 PF05133 Family 56 1289 413.50 14 90.04 Changed Phage portal protein, SPP1 Gp6-like
Phage_rep_O PF04492 Family 9 670 97.40 48 35.34 Changed Bacteriophage replication protein O
Phage_rep_org_N PF09681 Family 26 638 117.60 31 43.88 Changed N-terminal phage replisome organiser (Phage_rep_org_N)
Phage_RpbA PF10789 Family 8 36 103.20 35 85.48 Changed Phage RNA polymerase binding, RpbA
Phage_sheath_1 PF04984 Family 41 3025 301.10 16 92.64 Changed Phage tail sheath protein
Phage_stabilise PF11134 Family 3 145 449.10 82 97.02 Changed Phage stabilisation protein
Phage_T4_gp19 PF06841 Family 97 689 139.90 19 81.40 Changed T4-like virus tail tube protein gp19
Phage_T4_Gp30_7 PF06919 Family 2 33 121.30 86 99.55 Changed Phage Gp30.7 protein
Phage_T4_gp36 PF03903 Family 6 60 172.50 31 32.80 Changed Phage T4 tail fibre
Phage_T4_Ndd PF06591 Family 2 31 148.50 58 98.82 Changed T4-like phage nuclear disruption protein (Ndd)
Phage_T7_Capsid PF05396 Family 6 46 122.10 41 41.72 Changed Phage T7 capsid assembly protein
Phage_T7_tail PF03906 Family 10 136 162.20 35 27.80 Changed Phage T7 tail fibre protein
Phage_TAC PF06222 Family 6 219 121.60 75 96.51 Changed Phage tail assembly chaperone
Phage_tail PF04630 Family 14 370 175.60 25 78.65 Changed Phage major tail protein
Phage_tail_2 PF06199 Family 63 727 135.50 20 78.71 Changed Phage major tail protein 2
Phage_tail_3 PF08813 Family 12 222 149.50 24 74.81 Changed Phage tail protein
Phage_tail_L PF05100 Family 8 1425 186.40 62 86.69 Changed Phage minor tail protein L
phage_tail_N PF08400 Family 9 1004 125.20 65 25.71 Changed Prophage tail fibre N-terminal
Phage_tail_S PF05069 Family 46 1328 130.20 23 91.49 Changed Phage virion morphogenesis family
Phage_tail_T PF06223 Family 4 777 96.40 61 80.47 Changed Minor tail protein T
Phage_tail_U PF06141 Family 8 798 127.30 64 99.43 Changed Phage minor tail protein U
Phage_tail_X PF05489 Domain 32 981 58.70 40 67.46 Changed Phage Tail Protein X
Phage_terminase PF10668 Domain 6 212 60.70 37 24.56 Changed Phage terminase small subunit
Phage_term_sma PF07141 Family 2 45 172.70 91 98.00 Changed Putative bacteriophage terminase small subunit
Phage_term_smal PF05944 Family 36 711 130.40 42 55.90 Changed Phage small terminase subunit
Phage_Treg PF04761 Family 2 33 56.50 75 97.85 Changed Lactococcus bacteriophage putative transcription regulator
Phage_tube PF04985 Family 53 1069 163.70 38 97.85 Changed Phage tail tube protein FII
Phage_X PF05155 Family 18 179 88.90 29 24.99 Changed Phage X family
Phage_XkdX PF09693 Family 23 600 39.20 39 73.28 Changed Phage uncharacterised protein (Phage_XkdX)
PhaG_MnhG_YufB PF03334 Family 234 1788 82.50 33 67.13 Changed Na+/H+ antiporter subunit
PhaP_Bmeg PF09602 Family 2 94 162.60 80 76.60 Changed Polyhydroxyalkanoic acid inclusion protein (PhaP_Bmeg)
Phasin PF05597 Family 31 264 129.00 33 71.12 Changed Poly(hydroxyalcanoate) granule associated protein (phasin)
Phasin_2 PF09361 Domain 132 960 99.50 18 65.25 Changed Phasin protein
PHAT PF09246 Domain 4 24 110.20 45 11.80 Changed PHAT
PHA_gran_rgn PF09650 Family 24 217 89.10 29 90.59 Changed Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn)
PHA_synth_III_E PF09712 Family 10 111 237.60 22 79.03 Changed Poly(R)-hydroxyalkanoic acid synthase subunit (PHA_synth_III_E)
PHBC_N PF12551 Family 58 186 45.40 41 7.67 Changed Poly-beta-hydroxybutyrate polymerase N terminal
PHB_acc PF05233 Domain 72 555 40.90 38 29.37 Changed PHB accumulation regulatory domain
PHB_acc_N PF07879 Domain 47 465 63.80 56 33.74 Changed PHB/PHA accumulation regulator DNA-binding domain
PHB_depo_C PF06850 Family 11 544 200.80 49 46.95 Changed PHB de-polymerase C-terminus
PHD PF00628 Domain 92 10006 49.80 31 6.20 Changed PHD-finger
PhdYeFM_antitox PF02604 Domain 156 5612 70.50 18 79.79 Changed Antitoxin Phd_YefM, type II toxin-antitoxin system
PHD_2 PF13831 Family 28 1358 35.50 47 3.52 Changed PHD-finger
PHD_3 PF13922 Domain 13 166 65.00 59 4.50 Changed PHD domain of transcriptional enhancer, Asx
Phenol_Hydrox PF02332 Domain 23 1141 186.10 33 63.63 Changed Methane/Phenol/Toluene Hydroxylase
Phenol_hyd_sub PF06099 Family 23 83 58.60 42 70.33 Changed Phenol hydroxylase subunit
Phenol_MetA_deg PF13557 Family 154 1206 237.20 14 76.57 Changed Putative MetA-pathway of phenol degradation
Phenol_monoox PF04663 Family 25 87 66.00 43 56.72 Changed Phenol hydroxylase conserved region
Phenyl_P_gamma PF09662 Family 2 10 81.30 43 96.10 Changed Phenylphosphate carboxylase gamma subunit (Phenyl_P_gamma)
Pheromone PF08015 Family 38 68 61.10 24 97.63 Changed Fungal mating-type pheromone
Phe_hydrox_dim PF07976 Family 78 504 164.70 24 25.89 Changed Phenol hydroxylase, C-terminal dimerisation domain
Phe_tRNA-synt_N PF02912 Domain 53 4298 72.50 33 21.23 Changed Aminoacyl tRNA synthetase class II, N-terminal domain
Phe_ZIP PF08916 Domain 7 161 58.10 48 9.67 Changed Phenylalanine zipper
PHF5 PF03660 Family 19 319 103.40 71 89.84 Changed PHF5-like protein
Phg_2220_C PF09524 Domain 26 362 73.70 47 26.64 Changed Conserved phage C-terminus (Phg_2220_C)
Phi-29_GP16_7 PF06720 Family 2 6 129.30 60 99.11 Changed Bacteriophage phi-29 early protein GP16.7
Phi-29_GP3 PF05435 Family 3 7 265.90 66 100.00 Changed Phi-29 DNA terminal protein GP3
Phi-29_GP4 PF05464 Family 3 7 125.40 73 99.32 Changed Phi-29-like late genes activator (early protein GP4)
phiKZ_IP PF12699 Family 14 27 299.70 13 68.77 Changed phiKZ-like phage internal head proteins
Phi_1 PF04674 Family 21 304 240.80 43 84.05 Changed Phosphate-induced protein 1 conserved region
Phlebovirus_G1 PF07243 Family 4 348 338.10 54 53.03 Changed Phlebovirus glycoprotein G1
Phlebovirus_G2 PF07245 Family 4 259 373.20 38 33.86 Changed Phlebovirus glycoprotein G2
Phlebovirus_NSM PF07246 Family 3 151 102.90 40 14.73 Changed Phlebovirus nonstructural protein NS-M
PhnA PF03831 Family 104 2536 55.40 62 47.32 Changed PhnA protein
PhnA_Zn_Ribbon PF08274 Domain 34 2095 31.30 58 26.06 Changed PhnA Zinc-Ribbon
PhnG PF06754 Family 50 665 145.30 51 96.70 Changed Phosphonate metabolism protein PhnG
PhnH PF05845 Family 73 670 188.20 48 96.50 Changed Bacterial phosphonate metabolism protein (PhnH)
PhnI PF05861 Family 46 678 346.70 67 97.64 Changed Bacterial phosphonate metabolism protein (PhnI)
PhnJ PF06007 Family 32 691 272.60 76 95.83 Changed Phosphonate metabolism protein PhnJ
PHO4 PF01384 Family 174 5075 368.90 29 86.21 Changed Phosphate transporter family
Pho86 PF11124 Family 10 45 287.50 41 91.77 Changed Inorganic phosphate transporter Pho86
Pho88 PF10032 Family 27 200 178.70 39 92.04 Changed Phosphate transport (Pho88)
PhoD PF09423 Domain 148 1704 392.20 20 71.03 Changed PhoD-like phosphatase
PhoH PF02562 Family 164 6190 200.10 47 57.55 Changed PhoH-like protein
PhoPQ_related PF10142 Family 26 293 341.20 42 71.85 Changed PhoPQ-activated pathogenicity-related protein
PhoQ_Sensor PF08918 Domain 10 556 178.50 77 37.00 Changed PhoQ Sensor
Phosducin PF02114 Domain 2 1240 169.10 36 84.47 Changed Phosducin
PhosphMutase PF10143 Family 92 556 172.10 32 41.38 Changed 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
Phosphodiest PF01663 Family 70 4764 283.30 14 54.15 Changed Type I phosphodiesterase / nucleotide pyrophosphatase
Phosphoesterase PF04185 Family 20 2105 335.40 23 58.08 Changed Phosphoesterase family
Phospholamban PF04272 Domain 2 32 52.00 90 96.41 Changed Phospholamban
Phospholip_A2_1 PF00068 Domain 37 1645 114.20 33 69.11 Changed Phospholipase A2
Phospholip_A2_2 PF05826 Family 23 357 92.80 33 37.16 Changed Phospholipase A2
Phospholip_A2_3 PF09056 Domain 18 148 106.50 36 37.65 Changed Prokaryotic phospholipase A2
Phospholip_B PF04916 Family 6 390 411.50 27 85.60 Changed Phospholipase B
Phosphonate-bd PF12974 Family 178 3450 236.80 20 68.71 Changed ABC transporter, phosphonate, periplasmic substrate-binding protein
Phosphoprotein PF00922 Family 5 426 151.00 51 89.39 Changed Vesiculovirus phosphoprotein
Phosphorylase PF00343 Family 9 4954 590.10 40 79.46 Changed Carbohydrate phosphorylase
Phospho_p8 PF10195 Family 13 132 57.90 46 70.61 Changed DNA-binding nuclear phosphoprotein p8
Phostensin PF13914 Domain 5 99 122.60 49 22.28 Changed Phostensin PP1-binding and SH3-binding region
Phostensin_N PF13916 Domain 4 58 83.50 56 14.78 Changed PP1-regulatory protein, Phostensin N-terminal
Phos_pyr_kin PF08543 Family 132 8058 233.80 27 80.50 Changed Phosphomethylpyrimidine kinase
Photo_RC PF00124 Family 55 8728 232.40 49 91.25 Changed Photosynthetic reaction centre protein
PhoU PF01895 Domain 388 11541 87.20 22 51.69 Changed PhoU domain
PhoU_div PF01865 Family 9 1815 205.00 24 94.91 Changed Protein of unknown function DUF47
PHP PF02811 Family 69 14520 213.50 16 29.40 Changed PHP domain
PHP_C PF13263 Domain 143 736 49.30 25 16.25 Changed PHP-associated
PHR PF08005 Domain 18 549 142.80 41 14.32 Changed PHR domain
PhrC_PhrF PF11131 Family 4 36 37.00 62 95.28 Changed Rap-phr extracellular signalling
PHTB1_C PF14728 Family 6 158 312.30 34 42.03 New PTHB1 C-terminus
PHTB1_N PF14727 Family 25 181 348.90 39 50.44 New PTHB1 N-terminus
Phtf-FEM1B_bdg PF12129 Domain 3 198 143.60 60 22.68 Changed Male germ-cell putative homeodomain transcription factor
PHY PF00360 Family 80 3555 152.50 56 28.28 Changed Phytochrome region
Phycobilisome PF00502 Domain 22 4056 96.30 32 84.97 Changed Phycobilisome protein
Phycoerythr_ab PF02972 Family 5 25 56.60 54 46.87 Changed Phycoerythrin, alpha/beta chain
PhyH PF05721 Family 39 3239 205.00 16 65.62 Changed Phytanoyl-CoA dioxygenase (PhyH)
Phytase PF02333 Domain 2 586 193.30 42 71.03 Changed Phytase
Phytase-like PF13449 Domain 51 1288 314.60 19 66.08 Changed Esterase-like activity of phytase
Phyto-Amp PF15438 Family 3 24 179.30 70 82.31 New Antigenic membrane protein of phytoplasma
Phytochelatin PF05023 Domain 20 280 197.80 39 55.01 Changed Phytochelatin synthase
Phytochelatin_C PF09328 Family 14 95 238.20 45 54.33 Changed Domain of unknown function (DUF1984)
Phytoreo_P8 PF07124 Family 4 19 423.20 64 100.00 Changed Phytoreovirus outer capsid protein P8
Phytoreo_Pns PF05451 Family 4 13 330.40 43 93.21 Changed Phytoreovirus nonstructural protein Pns10/11
Phytoreo_S7 PF07236 Family 4 20 470.80 42 87.70 Changed Phytoreovirus S7 protein
Phyto_Pns9_10 PF05878 Family 3 17 296.10 38 94.27 Changed Phytoreovirus nonstructural protein Pns9/Pns10
PHZA_PHZB PF03284 Domain 8 88 153.10 69 98.67 Changed Phenazine biosynthesis protein A/B
PhzC-PhzF PF02567 Family 14 3486 247.90 26 93.31 Changed Phenazine biosynthesis-like protein
PH_10 PF15411 Domain 39 249 117.60 29 12.77 New Pleckstrin homology domain
PH_11 PF15413 Domain 7 262 108.70 26 18.63 New Pleckstrin homology domain
PH_2 PF08458 Family 9 142 106.40 39 26.64 Changed Plant pleckstrin homology-like region
PH_3 PF14593 Family 31 202 102.20 47 18.57 New PH domain
PH_4 PF15404 Domain 32 91 169.50 38 15.94 New Pleckstrin homology domain
PH_5 PF15405 Domain 42 284 136.40 27 11.08 New Pleckstrin homology domain
PH_6 PF15406 Domain 13 72 108.00 51 19.22 New Pleckstrin homology domain
PH_7 PF15408 Domain 2 2 103.00 27 10.99 New Pleckstrin homology domain
PH_8 PF15409 Domain 11 458 89.10 43 10.24 New Pleckstrin homology domain
PH_9 PF15410 Domain 16 917 111.50 33 7.42 New Pleckstrin homology domain
PH_BEACH PF14844 Domain 47 917 103.80 25 4.48 New PH domain associated with Beige/BEACH
PI-PLC-X PF00388 Family 140 2890 145.10 30 19.62 Changed Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y PF00387 Family 86 1860 113.40 41 11.94 Changed Phosphatidylinositol-specific phospholipase C, Y domain
PI31_Prot_C PF08577 Family 26 230 74.20 35 24.24 Changed PI31 proteasome regulator
PI31_Prot_N PF11566 Family 42 340 146.10 22 42.76 Changed PI31 proteasome regulator N-terminal
PI3Ka PF00613 Family 16 1353 179.80 26 14.57 Changed Phosphoinositide 3-kinase family, accessory domain (PIK domain)
PI3K_1B_p101 PF10486 Family 4 166 485.90 28 92.84 Changed Phosphoinositide 3-kinase gamma adapter protein p101 subunit
PI3K_C2 PF00792 Domain 24 929 139.70 21 12.87 Changed Phosphoinositide 3-kinase C2
PI3K_p85B PF02192 Family 13 271 76.20 47 7.94 Changed PI3-kinase family, p85-binding domain
PI3K_rbd PF00794 Family 12 588 105.50 25 9.04 Changed PI3-kinase family, ras-binding domain
PI3_PI4_kinase PF00454 Family 43 4451 225.50 21 15.05 Changed Phosphatidylinositol 3- and 4-kinase
Picorna_P3A PF06363 Family 4 57 99.70 76 4.63 Changed Picornaviridae P3A protein
Pico_P1A PF02226 Family 31 6859 67.40 60 13.37 Changed Picornavirus coat protein (VP4)
Pico_P2A PF00947 Domain 9 2140 113.10 63 8.57 Changed Picornavirus core protein 2A
Pico_P2B PF01552 Family 22 1455 99.00 57 5.36 Changed Picornavirus 2B protein
PID PF00640 Domain 25 2909 128.10 21 22.94 Changed Phosphotyrosine interaction domain (PTB/PID)
PID_2 PF14719 Domain 10 195 164.10 34 47.36 New Phosphotyrosine interaction domain (PTB/PID)
PIF PF05092 Family 26 72 489.90 37 94.42 Changed Per os infectivity
PIF1 PF05970 Family 13 2557 193.20 19 32.75 Changed PIF1-like helicase
PIG-F PF06699 Family 25 274 180.90 27 70.52 Changed GPI biosynthesis protein family Pig-F
PIG-H PF10181 Family 33 259 69.60 33 28.05 Changed GPI-GlcNAc transferase complex, PIG-H component
PIG-L PF02585 Family 137 4157 136.10 25 45.05 Changed GlcNAc-PI de-N-acetylase
PIG-P PF08510 Family 38 303 126.70 31 50.41 Changed PIG-P
PIG-S PF10510 Family 32 374 405.30 24 84.23 Changed Phosphatidylinositol-glycan biosynthesis class S protein
PIG-U PF06728 Family 64 358 321.40 29 81.80 Changed GPI transamidase subunit PIG-U
PIG-X PF08320 Domain 22 258 194.10 24 54.09 Changed PIG-X / PBN1
PIG-Y PF15159 Family 10 56 68.90 33 66.62 New Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y
PIGA PF08288 Family 23 340 87.90 55 19.14 Changed PIGA (GPI anchor biosynthesis)
Pigment_DH PF06324 Family 7 54 17.80 76 21.14 Changed Pigment-dispersing hormone (PDH)
PigN PF04987 Family 39 370 374.50 26 46.08 Changed Phosphatidylinositolglycan class N (PIG-N)
PIH1 PF08190 Family 26 646 212.10 14 58.79 Changed pre-RNA processing PIH1/Nop17
Pik1 PF11522 Family 20 95 50.50 41 5.27 Changed Yeast phosphatidylinositol-4-OH kinase Pik1
Pil1 PF13805 Family 7 285 249.20 51 65.78 Changed Eisosome component PIL1
PilI PF10623 Family 2 72 80.10 63 92.57 Changed Plasmid conjugative transfer protein PilI
Pilin PF00114 Domain 147 1425 110.70 23 71.92 Changed Pilin (bacterial filament)
Pilin_PilA PF14245 Family 48 287 100.80 20 62.61 Changed Type IV pilin PilA
Pilin_PilX PF11530 Family 2 59 126.50 71 79.05 Changed Minor type IV pilin, PilX
PilJ PF13675 Domain 504 2034 110.10 25 20.36 Changed Type IV pili methyl-accepting chemotaxis transducer N-term
PilM PF07419 Family 13 197 135.90 31 92.57 Changed PilM
PilM_2 PF11104 Family 37 952 315.90 25 86.32 Changed Type IV pilus assembly protein PilM;
PilN PF05137 Family 214 1587 79.40 23 35.54 Changed Fimbrial assembly protein (PilN)
PilO PF04350 Family 75 807 144.00 26 68.03 Changed Pilus assembly protein, PilO
PilP PF04351 Family 54 679 140.50 27 79.17 Changed Pilus assembly protein, PilP
PilS PF08805 Domain 18 332 137.50 30 72.62 Changed PilS N terminal
Pilt PF15453 Family 15 99 224.40 47 54.09 New Protein incorporated later into Tight Junctions
Pilus_CpaD PF09476 Family 38 190 181.00 27 84.57 Changed Pilus biogenesis CpaD protein (pilus_cpaD)
Pilus_PilP PF11356 Family 91 1330 88.20 22 37.51 Changed Type IV pilus biogenesis
PilX PF13681 Domain 20 47 97.10 25 40.70 Changed Type IV pilus assembly protein PilX C-term
PilX_N PF14341 Family 69 454 50.80 32 22.54 Changed PilX N-terminal
PilZ PF07238 Domain 191 5848 102.40 16 32.82 Changed PilZ domain
PIN PF01850 Domain 170 8807 121.10 16 80.11 Changed PIN domain
Pinin_SDK_memA PF04696 Family 11 266 123.00 32 28.27 Changed pinin/SDK/memA/ protein conserved region
Pinin_SDK_N PF04697 Family 2 80 126.30 73 20.63 Changed pinin/SDK conserved region
PINIT PF14324 Domain 38 474 149.60 39 24.75 Changed PINIT domain
PIN_2 PF10130 Domain 15 82 122.10 24 90.15 Changed PIN domain
PIN_3 PF13470 Domain 201 1089 110.50 21 70.24 Changed PIN domain
PIN_4 PF13638 Domain 147 2263 140.90 26 23.81 Changed PIN domain
PIP49_C PF12260 Family 36 397 186.10 26 48.34 Changed Protein-kinase domain of FAM69
PIP49_N PF14875 Domain 15 182 138.70 34 35.20 New N-term cysteine-rich ER, FAM69
PIP5K PF01504 Family 117 1752 260.10 28 29.93 Changed Phosphatidylinositol-4-phosphate 5-Kinase
PipA PF07108 Family 4 164 174.20 86 93.04 Changed PipA protein
PIR PF00399 Repeat 17 804 17.80 68 21.99 Changed Yeast PIR protein repeat
Pirin PF02678 Family 52 4965 109.40 35 40.71 Changed Pirin
Pirin_C PF05726 Domain 34 2522 103.60 28 34.49 Changed Pirin C-terminal cupin domain
PIRT PF15099 Family 10 80 125.90 42 88.69 New Phosphoinositide-interacting protein family
PITH PF06201 Domain 56 613 146.30 31 56.41 Changed PITH domain
Piwi PF02171 Family 18 2067 263.30 32 35.31 Changed Piwi domain
PixA PF12306 Family 33 128 167.10 25 93.80 Changed Inclusion body protein
PK PF00224 Family 13 7047 326.30 42 68.66 Changed Pyruvate kinase, barrel domain
PKD PF00801 Domain 93 5437 70.40 22 13.50 Changed PKD domain
PKD_channel PF08016 Family 13 1249 268.20 19 25.62 Changed Polycystin cation channel
PKI PF02827 Family 9 148 68.20 41 81.75 Changed cAMP-dependent protein kinase inhibitor
pKID PF02173 Family 17 369 42.00 56 14.79 Changed pKID domain
Pkinase PF00069 Domain 54 114309 237.60 20 40.43 Changed Protein kinase domain
Pkinase_C PF00433 Family 160 3537 48.00 30 6.79 Changed Protein kinase C terminal domain
Pkinase_Tyr PF07714 Domain 145 24806 232.30 26 33.84 Changed Protein tyrosine kinase
Pkip-1 PF06878 Family 19 40 162.40 33 93.32 Changed Pkip-1 protein
PKK PF12474 Family 23 413 135.60 35 24.19 Changed Polo kinase kinase
PknH_C PF14032 Domain 68 678 188.20 19 66.25 Changed PknH-like extracellular domain
Pkr1 PF08636 Family 20 147 74.60 44 37.83 Changed ER protein Pkr1
PK_C PF02887 Domain 173 6414 116.60 30 23.66 Changed Pyruvate kinase, alpha/beta domain
PLA1 PF02253 Domain 78 1227 244.60 43 80.00 Changed Phospholipase A1
PLA2G12 PF06951 Family 8 176 169.50 40 81.12 Changed Group XII secretory phospholipase A2 precursor (PLA2G12)
PLA2_B PF01735 Family 15 966 338.50 26 56.67 Changed Lysophospholipase catalytic domain
PLA2_inh PF02988 Family 5 85 82.30 38 41.96 Changed Phospholipase A2 inhibitor
PLAC PF08686 Domain 29 739 34.10 37 3.34 Changed PLAC (protease and lacunin) domain
PLAC8 PF04749 Family 114 1148 103.20 24 44.26 Changed PLAC8 family
PLAC9 PF15205 Family 4 31 68.10 66 72.19 New Placenta-specific protein 9
Planc_extracel PF07595 Motif 27 37 24.90 37 1.14 Changed Planctomycete extracellular
Plant_all_beta PF10532 Domain 10 22 105.40 36 16.50 Changed Plant specific N-all beta domain
Plant_NMP1 PF06694 Family 2 45 238.30 52 89.86 Changed Plant nuclear matrix protein 1 (NMP1)
Plant_tran PF04827 Family 5 275 132.70 41 47.04 Changed Plant transposon protein
Plant_vir_prot PF01307 Family 78 326 104.10 33 92.51 Changed Plant viral movement protein
Plant_zn_clust PF10533 Domain 21 226 45.10 53 14.48 Changed Plant zinc cluster domain
Plasmid_killer PF05015 Family 8 1079 89.40 31 94.60 Changed Plasmid maintenance system killer protein
Plasmid_parti PF01672 Family 34 451 83.30 42 46.53 Changed Putative plasmid partition protein
Plasmid_RAQPRD PF09686 Family 30 227 80.10 40 72.02 Changed Plasmid protein of unknown function (Plasmid_RAQPRD)
Plasmid_stabil PF05016 Family 158 6528 85.40 16 88.52 Changed Plasmid stabilisation system protein
Plasmid_stab_B PF10784 Family 11 396 68.40 37 59.10 Changed Plasmid stability protein
plasmid_Toxin PF12703 Family 6 28 70.20 59 92.47 Changed Toxin of toxin-antitoxin type 1 system
Plasmid_Txe PF06769 Family 13 1544 78.40 41 89.94 Changed Plasmid encoded toxin Txe
Plasmodium_HRP PF05403 Family 3 1003 117.00 75 96.41 Changed Plasmodium histidine-rich protein (HRPII/III)
Plasmodium_Vir PF05795 Family 125 471 296.30 13 89.84 Changed Plasmodium vivax Vir protein
Plasmod_dom_1 PF09715 Family 5 9 66.30 39 31.54 Changed Plasmodium protein of unknown function (Plasmod_dom_1)
Plasmod_MYXSPDY PF07981 Repeat 24 71 17.00 79 98.85 Changed Plasmodium repeat_MYXSPDY
Plasmod_Pvs28 PF06247 Family 11 164 197.10 58 88.67 Changed Plasmodium ookinete surface protein Pvs28
PLAT PF01477 Domain 84 3359 109.70 19 17.37 Changed PLAT/LH2 domain
PLATZ PF04640 Family 12 304 71.90 52 29.08 Changed PLATZ transcription factor
PLC-beta_C PF08703 Domain 8 215 168.00 38 15.68 Changed PLC-beta C terminal
PLDc PF00614 Family 48 1567 29.50 40 4.30 Changed Phospholipase D Active site motif
PLDc_2 PF13091 Domain 205 18675 139.20 19 41.80 Changed PLD-like domain
PLDc_3 PF13918 Domain 5 475 169.10 38 45.75 Changed PLD-like domain
PLDc_N PF13396 Domain 441 4348 46.90 27 12.42 Changed Phospholipase_D-nuclease N-terminal
PLD_C PF12357 Family 66 288 73.40 46 9.38 Changed Phospholipase D C terminal
Plectin PF00681 Repeat 119 3591 43.40 31 9.87 Changed Plectin repeat
Plexin_cytopl PF08337 Domain 11 880 437.30 47 33.18 Changed Plexin cytoplasmic RasGAP domain
PLRV_ORF5 PF01690 Family 14 317 377.50 41 71.26 Changed Potato leaf roll virus readthrough protein
PLU-1 PF08429 Family 30 546 291.60 26 21.73 Changed PLU-1-like protein
Plug PF07715 Domain 742 36469 109.70 22 13.45 Changed TonB-dependent Receptor Plug Domain
Plug_translocon PF10559 Domain 68 686 34.60 52 7.47 Changed Plug domain of Sec61p
Plus-3 PF03126 Domain 39 464 106.20 28 16.55 Changed Plus-3 domain
PM0188 PF11477 Family 4 21 347.70 37 81.47 Changed Sialyltransferase PMO188
PMAIP1 PF15150 Family 3 17 50.50 67 80.49 New Phorbol-12-myristate-13-acetate-induced
PmbA_TldD PF01523 Family 158 5034 291.30 25 63.32 Changed Putative modulator of DNA gyrase
PMBR PF09373 Repeat 49 106 32.50 28 8.87 Changed Pseudomurein-binding repeat
PMC2NT PF08066 Domain 31 282 91.50 28 11.48 Changed PMC2NT (NUC016) domain
PMD PF10536 Domain 44 1219 222.00 17 35.00 Changed Plant mobile domain
PMEI PF04043 Domain 142 1441 147.00 18 43.47 Changed Plant invertase/pectin methylesterase inhibitor
PMG PF05287 Family 15 251 146.40 33 89.87 Changed PMG protein
PMI_typeI PF01238 Family 8 4066 273.80 26 82.30 Changed Phosphomannose isomerase type I
PMM PF03332 Family 9 691 202.50 39 83.41 Changed Eukaryotic phosphomannomutase
PmoA PF14100 Family 65 174 281.70 25 73.69 Changed Methane oxygenase PmoA
PMP1_2 PF08114 Family 2 29 39.90 63 68.42 Changed ATPase proteolipid family
PMP22_Claudin PF00822 Family 13 2113 165.70 24 76.65 Changed PMP-22/EMP/MP20/Claudin family
Pmp3 PF01679 Family 117 1655 50.50 45 65.92 Changed Proteolipid membrane potential modulator
PMR5N PF14416 Domain 63 964 55.20 41 12.91 Changed PMR5 N terminal Domain
PmrD PF11183 Family 3 441 79.60 76 92.99 Changed Polymyxin resistance protein PmrD
PMSI1 PF15322 Family 11 35 272.00 60 89.90 New Protein missing in infertile sperm 1, putative
PMSR PF01625 Family 66 6530 153.90 41 66.75 Changed Peptide methionine sulfoxide reductase
PMT PF02366 Family 22 2315 228.90 21 38.08 Changed Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT_2 PF13231 Family 106 4872 159.90 15 29.25 Changed Dolichyl-phosphate-mannose-protein mannosyltransferase
PMT_C PF11647 Family 14 184 66.70 40 3.18 Changed C-terminal region of Pasteurella multocida toxin residues 569-1285
Pneumovirus_M2 PF06436 Family 4 75 156.70 58 82.92 Changed Pneumovirus matrix protein 2 (M2)
Pneumo_att_G PF05539 Family 3 103 160.30 60 99.79 Changed Pneumovirinae attachment membrane glycoprotein G
Pneumo_M2 PF07380 Family 3 21 84.50 67 96.47 Changed Pneumovirus M2 protein
Pneumo_matrix PF03393 Family 9 182 183.10 74 99.13 Changed Pneumovirus matrix protein
Pneumo_ncap PF03246 Family 4 663 129.50 46 99.85 Changed Pneumovirus nucleocapsid protein
Pneumo_NS1 PF03438 Family 2 37 136.00 85 98.24 Changed Pneumovirus NS1 protein
Pneumo_phosprot PF02478 Family 8 859 99.10 76 96.37 Changed Pneumovirus phosphoprotein
PNGaseA PF12222 Family 9 253 347.50 26 62.87 Changed Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A
PNK3P PF08645 Family 32 1136 164.20 32 45.94 Changed Polynucleotide kinase 3 phosphatase
PNMA PF14893 Family 13 255 253.30 30 58.05 New PNMA
PNPase PF03726 Domain 21 4259 81.70 30 11.36 Changed Polyribonucleotide nucleotidyltransferase, RNA binding domain
PNPase_C PF12111 Domain 16 611 38.90 67 3.77 Changed Polyribonucleotide phosphorylase C terminal
PNPOx_C PF10590 Domain 243 2399 42.50 54 19.13 Changed Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region
PNP_UDP_1 PF01048 Domain 159 15802 227.10 18 76.95 Changed Phosphorylase superfamily
PNRC PF15365 Family 36 209 56.20 38 22.51 New Proline-rich nuclear receptor coactivator
PNTB PF02233 Family 10 2429 439.00 53 87.05 Changed NAD(P) transhydrogenase beta subunit
POC1 PF10450 Family 3 40 242.90 33 98.06 Changed POC1 chaperone
PocR PF10114 Domain 71 805 166.20 26 39.32 Changed Sensory domain found in PocR
Podoplanin PF05808 Family 4 44 151.90 41 76.82 Changed Podoplanin
Podovirus_Gp16 PF05894 Family 4 17 330.60 31 93.00 Changed Podovirus DNA encapsidation protein (Gp16)
PolC_DP2 PF03833 Family 6 125 805.40 45 69.80 Changed DNA polymerase II large subunit DP2
Pollen_allerg_1 PF01357 Domain 136 1558 77.50 40 32.72 Changed Pollen allergen
Pollen_allerg_2 PF01620 Family 12 100 121.20 46 87.34 Changed Ribonuclease (pollen allergen)
Pollen_Ole_e_I PF01190 Family 91 693 93.10 23 40.42 Changed Pollen proteins Ole e I like
POLO_box PF00659 Family 81 913 67.70 25 17.34 Changed POLO box duplicated region
PolyA_pol PF01743 Domain 21 6516 124.10 35 27.78 Changed Poly A polymerase head domain
PolyA_pol_arg_C PF12626 Domain 70 1295 125.80 44 27.24 Changed Polymerase A arginine-rich C-terminus
PolyA_pol_RNAbd PF12627 Domain 312 6138 63.10 27 14.21 Changed Probable RNA and SrmB- binding site of polymerase A
PolyG_pol PF01518 Family 4 145 334.10 58 99.39 Changed Sigma NS protein
Polyhedrin PF00738 Family 17 392 188.10 78 98.09 Changed Polyhedrin
Polyketide_cyc PF03364 Family 95 3012 127.70 23 69.89 Changed Polyketide cyclase / dehydrase and lipid transport
Polyketide_cyc2 PF10604 Family 179 5359 142.00 13 81.08 Changed Polyketide cyclase / dehydrase and lipid transport
Polyoma_agno PF01736 Family 3 130 58.10 81 91.17 Changed Polyomavirus agnoprotein
Polyoma_coat PF00718 Domain 12 3425 141.30 62 81.55 Changed Polyomavirus coat protein
Polyoma_coat2 PF00761 Family 8 383 225.50 48 91.94 Changed Polyomavirus coat protein
Polyoma_lg_T_C PF06431 Family 3 1776 116.30 75 64.60 Changed Polyomavirus large T antigen C-terminus
polyprenyl_synt PF00348 Domain 16 11487 242.40 28 77.16 Changed Polyprenyl synthetase
Polysacc_deac_1 PF01522 Family 104 13288 133.50 20 38.42 Changed Polysaccharide deacetylase
Polysacc_deac_2 PF04748 Family 134 1399 203.80 39 64.31 Changed Divergent polysaccharide deacetylase
Polysacc_deac_3 PF15421 Family 8 18 428.50 40 52.98 New Putative polysaccharide deacetylase
Polysacc_lyase PF14099 Family 54 240 233.50 15 63.76 Changed Polysaccharide lyase
Polysacc_synt PF01943 Family 31 9954 278.40 14 58.36 Changed Polysaccharide biosynthesis protein
Polysacc_synt_2 PF02719 Family 77 3666 278.60 42 55.79 Changed Polysaccharide biosynthesis protein
Polysacc_synt_3 PF13440 Family 52 1715 248.50 15 56.48 Changed Polysaccharide biosynthesis protein
Polysacc_synt_4 PF04669 Family 29 437 142.80 30 66.25 Changed Polysaccharide biosynthesis
Polysacc_synt_C PF14667 Family 347 5970 133.80 17 27.14 New Polysaccharide biosynthesis C-terminal domain
Polysacc_syn_2C PF08485 Family 50 564 47.90 54 14.07 Changed Polysaccharide biosynthesis protein C-terminal
Poly_export PF02563 Family 183 3850 91.50 27 23.26 Changed Polysaccharide biosynthesis/export protein
Pol_alpha_B_N PF08418 Family 27 272 213.00 20 36.09 Changed DNA polymerase alpha subunit B N-terminal
POM121 PF15229 Family 32 248 179.20 33 32.00 New POM121 family
Pombe_5TM PF09437 Family 2 8 120.00 34 85.26 Changed Pombe specific 5TM protein
Ponericin PF07442 Family 3 5 29.00 71 97.32 Changed Ponericin
POP1 PF06978 Family 38 354 151.60 31 21.10 Changed Ribonucleases P/MRP protein subunit POP1
Popeye PF04831 Family 10 249 145.50 45 44.99 Changed Popeye protein conserved region
POPLD PF08170 Domain 31 292 95.00 31 11.29 Changed POPLD (NUC188) domain
POR PF01558 Family 119 5899 177.10 23 24.80 Changed Pyruvate ferredoxin/flavodoxin oxidoreductase
PorB PF11565 Family 4 21 103.70 35 77.37 Changed Alpha helical Porin B
Porin_1 PF00267 Domain 18 5868 301.00 39 93.43 Changed Gram-negative porin
Porin_2 PF02530 Family 16 586 326.40 28 88.24 Changed Porin subfamily
Porin_3 PF01459 Family 90 1317 250.60 22 88.76 Changed Eukaryotic porin
Porin_4 PF13609 Domain 115 4742 323.20 20 89.64 Changed Gram-negative porin
Porin_OmpG PF09381 Family 4 299 288.50 92 99.37 Changed Outer membrane protein G (OmpG)
Porin_OmpL1 PF11389 Family 3 83 247.50 83 87.46 Changed Leptospira porin protein OmpL1
Porin_O_P PF07396 Family 34 1073 310.00 14 76.92 Changed Phosphate-selective porin O and P
Porphobil_deam PF01379 Domain 19 4004 207.30 46 65.99 Changed Porphobilinogen deaminase, dipyromethane cofactor binding domain
Porphobil_deamC PF03900 Domain 21 3787 74.20 34 23.23 Changed Porphobilinogen deaminase, C-terminal domain
Porph_ging PF09697 Family 44 420 59.90 41 22.25 Changed Protein of unknown function (Porph_ging)
PORR PF11955 Family 27 336 298.50 30 73.17 Changed Plant organelle RNA recognition domain
POR_N PF01855 Family 32 5386 224.70 28 29.55 Changed Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
Post_transc_reg PF13797 Family 26 293 86.50 35 87.77 Changed Post-transcriptional regulator
POT1 PF02765 Domain 48 329 138.30 21 19.57 Changed Telomeric single stranded DNA binding POT1/CDC13
Potassium_chann PF11404 Family 2 56 28.50 76 4.63 Changed Potassium voltage-gated channel
Potass_KdpF PF09604 Family 40 728 25.00 44 58.04 Changed F subunit of K+-transporting ATPase (Potass_KdpF)
potato_inhibit PF00280 Domain 60 372 61.90 42 75.93 Changed Potato inhibitor I family
Potex_coat PF06184 Family 2 45 148.20 92 83.07 Changed Potexvirus coat protein
POTRA_1 PF08478 Family 92 3670 69.80 23 23.53 Changed POTRA domain, FtsQ-type
POTRA_2 PF08479 Family 60 1933 75.00 24 13.68 Changed POTRA domain, ShlB-type
Potyvirid-P3 PF13608 Family 65 976 381.00 35 16.23 Changed Protein P3 of Potyviral polyprotein
Poty_coat PF00767 Family 33 6595 218.30 55 33.96 Changed Potyvirus coat protein
Poty_PP PF08440 Family 63 1068 222.90 45 9.43 Changed Potyviridae polyprotein
Pou PF00157 Domain 20 1357 69.20 59 18.40 Changed Pou domain - N-terminal to homeobox domain
POX PF07526 Domain 39 330 129.90 38 22.83 Changed Associated with HOX
Poxvirus PF06227 Family 37 475 156.50 20 92.13 Changed dsDNA Poxvirus
Poxvirus_B22R PF04395 Family 14 108 176.60 39 11.78 Changed Poxvirus B22R protein
Poxvirus_B22R_C PF13168 Family 19 94 196.20 58 10.66 Changed Poxvirus B22R protein C-terminal
Poxvirus_B22R_N PF13169 Family 18 90 90.90 44 5.09 Changed Poxvirus B22R protein N-terminal
Pox_A11 PF05061 Family 9 62 290.10 58 99.77 Changed Poxvirus A11 Protein
Pox_A12 PF04651 Family 11 69 182.20 63 97.69 Changed Poxvirus A12 protein
Pox_A14 PF05767 Family 9 50 89.70 60 99.01 Changed Poxvirus virion envelope protein A14
Pox_A21 PF05323 Family 11 60 112.80 61 97.71 Changed Poxvirus A21 Protein
Pox_A22 PF04848 Family 13 94 152.10 38 81.27 Changed Poxvirus A22 protein
Pox_A28 PF04584 Family 15 68 139.50 60 99.61 Changed Poxvirus A28 family
Pox_A30L_A26L PF06086 Family 3 96 208.20 60 42.94 Changed Orthopoxvirus A26L/A30L protein
Pox_A31 PF05771 Family 6 59 112.70 75 84.00 Changed Poxvirus A31 protein
Pox_A32 PF04665 Family 10 981 165.70 48 66.54 Changed Poxvirus A32 protein
Pox_A3L PF05288 Family 12 91 66.90 66 95.24 Changed Poxvirus A3L Protein
Pox_A51 PF04948 Family 8 76 276.80 52 97.71 Changed Poxvirus A51 protein
Pox_A6 PF04924 Family 12 67 362.30 62 98.12 Changed Poxvirus A6 protein
Pox_A8 PF04745 Family 5 56 287.30 66 98.14 Changed VITF-3 subunit protein
Pox_A9 PF04835 Family 8 68 54.00 71 55.25 Changed A9 protein conserved region
Pox_Ag35 PF03286 Family 10 84 198.20 52 93.58 Changed Pox virus Ag35 surface protein
Pox_ATPase-GT PF10640 Domain 14 75 314.60 67 37.27 Changed mRNA capping enzyme N-terminal, ATPase and guanylyltransferase
Pox_A_type_inc PF04508 Repeat 27 453 22.90 49 16.96 Changed Viral A-type inclusion protein repeat
Pox_C4_C10 PF03336 Family 8 127 260.00 52 96.81 Changed Poxvirus C4/C10 protein
Pox_C7_F8A PF03287 Family 11 76 148.20 44 89.05 Changed Poxvirus C7/F8A protein
Pox_D2 PF04701 Family 10 55 135.20 51 90.63 Changed Pox virus D2 protein
Pox_D3 PF04580 Family 10 66 225.60 54 96.18 Changed Chordopoxvirinae D3 protein
Pox_D5 PF03288 Domain 41 1059 91.70 20 16.60 Changed Poxvirus D5 protein-like
Pox_E10 PF04805 Family 11 59 69.90 74 73.15 Changed E10-like protein conserved region
Pox_E2-like PF04497 Family 27 184 610.30 29 95.71 Changed Poxviridae protein
Pox_E6 PF04656 Family 11 74 552.40 72 100.00 Changed Pox virus E6 protein
Pox_E8 PF03394 Family 8 66 236.70 77 85.75 Changed Poxvirus E8 protein
Pox_F11 PF04943 Family 7 107 197.40 38 88.29 Changed Poxvirus F11 protein
Pox_F12L PF03337 Family 11 87 615.20 60 99.36 Changed Poxvirus F12L protein
Pox_F15 PF04596 Family 11 51 136.20 68 88.25 Changed Poxvirus protein F15
Pox_F16 PF04708 Family 9 65 212.30 56 91.97 Changed Poxvirus F16 protein
Pox_F17 PF04767 Family 11 57 95.10 63 94.23 Changed DNA-binding 11 kDa phosphoprotein
Pox_G5 PF04599 Family 11 78 413.50 57 96.90 Changed Poxvirus G5 protein
Pox_G7 PF05503 Family 11 66 356.90 62 98.52 Changed Poxvirus G7-like
Pox_H7 PF04787 Family 9 66 142.60 56 98.71 Changed Late protein H7
Pox_I1 PF03289 Family 11 65 307.60 73 99.43 Changed Poxvirus protein I1
Pox_I3 PF04661 Family 11 69 259.30 58 95.83 Changed Poxvirus I3 ssDNA-binding protein
Pox_I5 PF04713 Family 11 51 76.80 53 97.05 Changed Poxvirus protein I5
Pox_I6 PF04595 Family 13 110 309.40 41 87.11 Changed Poxvirus I6-like family
Pox_int_trans PF05718 Family 12 61 375.30 68 99.35 Changed Poxvirus intermediate transcription factor
Pox_J1 PF03338 Family 12 67 143.40 63 94.92 Changed Poxvirus J1 protein
Pox_L3_FP4 PF03339 Family 5 71 314.20 61 90.71 Changed Poxvirus L3/FP4 protein
Pox_L5 PF04872 Family 12 65 76.90 55 61.63 Changed Poxvirus L5 protein family
Pox_LP_H2 PF03356 Family 12 119 179.90 64 97.56 Changed Viral late protein H2
Pox_M2 PF04887 Family 4 53 194.80 75 88.90 Changed Poxvirus M2 protein
Pox_MCEL PF03291 Family 11 647 284.20 25 61.34 Changed mRNA capping enzyme
Pox_mRNA-cap PF03341 Family 9 57 279.60 73 99.50 Changed Poxvirus mRNA capping enzyme, small subunit
Pox_P21 PF05313 Family 10 62 188.40 56 95.28 Changed Poxvirus P21 membrane protein
Pox_P35 PF03213 Family 12 130 279.60 48 99.48 Changed Poxvirus P35 protein
Pox_P4A PF03395 Family 4 92 847.60 67 98.38 Changed Poxvirus P4A protein
Pox_P4B PF03292 Family 9 314 273.70 52 97.52 Changed Poxvirus P4B major core protein
Pox_polyA_pol PF03296 Domain 13 65 149.10 72 31.45 Changed Poxvirus poly(A) polymerase nucleotidyltransferase domain
Pox_polyA_pol_C PF12629 Domain 13 66 197.10 65 42.22 Changed Poxvirus poly(A) polymerase C-terminal domain
Pox_polyA_pol_N PF12630 Domain 13 66 112.10 65 24.00 Changed Poxvirus poly(A) polymerase N-terminal domain
Pox_Rap94 PF03294 Family 10 107 595.20 68 99.97 Changed RNA polymerase-associated transcription specificity factor, Rap94
Pox_Rif PF03340 Family 11 69 518.40 71 98.91 Changed Poxvirus rifampicin resistance protein
Pox_RNA_pol PF03293 Family 10 55 160.00 73 97.25 Changed Poxvirus DNA-directed RNA polymerase, 18 kD subunit
Pox_RNA_Pol_19 PF05320 Family 12 52 165.80 63 95.59 Changed Poxvirus DNA-directed RNA polymerase 19 kDa subunit
Pox_RNA_Pol_22 PF05273 Family 10 53 182.10 69 99.44 Changed Poxvirus RNA polymerase 22 kDa subunit
Pox_RNA_pol_35 PF03396 Family 11 79 275.80 64 95.56 Changed Poxvirus DNA-directed RNA polymerase, 35 kD subunit
Pox_ser-thr_kin PF05445 Family 9 74 427.40 67 96.40 Changed Poxvirus serine/threonine protein kinase
Pox_T4_C PF04490 Family 6 35 141.70 45 64.07 Changed Poxvirus T4 protein, C terminus
Pox_T4_N PF04491 Family 5 44 46.50 59 24.35 Changed Poxvirus T4 protein, N terminus
Pox_TAA1 PF03295 Family 10 57 62.90 71 41.95 Changed Poxvirus trans-activator protein A1 C-terminal
Pox_TAP PF03355 Family 5 56 253.90 80 99.79 Changed Viral Trans-Activator Protein
Pox_VERT_large PF04441 Family 9 69 696.20 72 98.19 Changed Poxvirus early transcription factor (VETF), large subunit
Pox_vIL-18BP PF05566 Family 2 55 123.30 86 99.62 Changed Orthopoxvirus interleukin 18 binding protein
Pox_VLTF3 PF04947 Family 23 135 169.80 31 59.54 Changed Poxvirus Late Transcription Factor VLTF3 like
Pox_VP8_L4R PF04498 Family 8 58 216.10 66 86.45 Changed Poxvirus nucleic acid binding protein VP8/L4R
PP-binding PF00550 Domain 163 41592 66.40 23 7.49 Changed Phosphopantetheine attachment site
PP-binding_2 PF14573 Domain 5 15 91.30 44 35.82 New Acyl-carrier
PP1 PF07430 Family 3 26 125.60 24 88.55 Changed Phloem filament protein PP1
PP1c_bdg PF10488 Domain 5 184 131.80 36 35.04 Changed Phosphatase-1 catalytic subunit binding region
PP1_bind PF15276 Family 12 102 62.80 49 4.09 New Protein phosphatase 1 binding
PP1_inhibitor PF05361 Family 8 231 108.80 38 79.73 Changed PKC-activated protein phosphatase-1 inhibitor
PP2 PF14299 Family 88 511 150.10 27 61.38 Changed Phloem protein 2
PP28 PF10252 Domain 22 247 84.40 51 39.93 Changed Casein kinase substrate phosphoprotein PP28
PP2C PF00481 Family 31 7190 218.80 20 49.91 Changed Protein phosphatase 2C
PP2C_2 PF13672 Family 68 3942 219.60 18 65.13 Changed Protein phosphatase 2C
PP2C_C PF07830 Domain 15 272 75.90 49 20.16 Changed Protein serine/threonine phosphatase 2C, C-terminal domain
PPAK PF02818 Motif 33 559 27.60 59 1.68 Changed PPAK motif
PPARgamma_N PF12577 Family 8 132 83.90 64 18.98 Changed PPAR gamma N-terminal region
PPC PF04151 Domain 151 2040 70.40 24 12.12 Changed Bacterial pre-peptidase C-terminal domain
PPDFL PF15060 Family 7 87 95.70 50 94.60 New Differentiation and proliferation regulator
PPDK_N PF01326 Family 101 5203 323.40 27 40.31 Changed Pyruvate phosphate dikinase, PEP/pyruvate binding domain
PPE PF00823 Family 146 3533 151.60 45 28.01 Changed PPE family
PPI_Ypi1 PF07491 Family 38 331 66.50 40 41.30 Changed Protein phosphatase inhibitor
PPK2 PF03976 Domain 10 2990 226.10 37 80.64 Changed Polyphosphate kinase 2 (PPK2)
PPO1_DWL PF12142 Domain 39 355 52.10 52 10.25 Changed Polyphenol oxidase middle domain
PPO1_KFDV PF12143 Domain 32 337 119.10 40 22.90 Changed Protein of unknown function (DUF_B2219)
PPP1R35_C PF15503 Family 21 62 138.20 29 58.61 New Protein phosphatase 1 regulatory subunit 35 C-terminus
PPP4R2 PF09184 Family 15 305 204.50 22 50.95 Changed PPP4R2
PPP5 PF08321 Family 10 434 88.60 30 17.10 Changed PPP5 TPR repeat region
PPPI_inhib PF14895 Family 17 94 304.60 35 76.71 New Protein phosphatase 1 inhibitor
PPR PF01535 Family 518 31410 29.30 21 15.97 Changed PPR repeat
PPR_1 PF12854 Repeat 433 3378 33.10 30 7.47 Changed PPR repeat
PPR_2 PF13041 Repeat 436 33080 49.20 26 28.42 Changed PPR repeat family
PPR_3 PF13812 Repeat 132 5769 33.00 18 6.79 Changed Pentatricopeptide repeat domain
PPTA PF01239 Repeat 143 2973 30.30 27 27.00 Changed Protein prenyltransferase alpha subunit repeat
Pput2613-deam PF14427 Family 4 6 116.50 34 4.32 Changed Pput_2613-like deaminase
PPV_E1_C PF00519 Family 66 1112 256.40 49 68.38 Changed Papillomavirus helicase
PPV_E1_N PF00524 Family 76 514 123.50 39 22.24 Changed E1 Protein, N terminal domain
PPV_E2_C PF00511 Domain 99 565 76.60 44 22.58 Changed E2 (early) protein, C terminal
PPV_E2_N PF00508 Family 82 467 197.90 44 51.73 Changed E2 (early) protein, N terminal
Ppx-GppA PF02541 Family 10 5020 281.70 27 64.20 Changed Ppx/GppA phosphatase family
PP_kinase PF02503 Domain 173 3692 200.80 31 31.95 Changed Polyphosphate kinase middle domain
PP_kinase_C PF13090 Domain 174 3665 303.40 49 47.92 Changed Polyphosphate kinase C-terminal domain
PP_kinase_N PF13089 Domain 174 3094 105.30 41 15.31 Changed Polyphosphate kinase N-terminal domain
PP_M1 PF03012 Family 11 932 217.20 76 99.90 Changed Phosphoprotein
PQ-loop PF04193 Repeat 255 3702 59.40 21 35.09 Changed PQ loop repeat
PqiA PF04403 Family 167 3875 157.40 30 72.64 Changed Paraquat-inducible protein A
PQQ PF01011 Repeat 130 3998 36.40 26 10.04 Changed PQQ enzyme repeat
PqqA PF08042 Family 26 215 20.90 53 63.51 Changed PqqA family
PqqD PF05402 Family 330 1200 72.60 20 58.04 Changed Coenzyme PQQ synthesis protein D (PqqD)
PQQ_2 PF13360 Domain 112 7855 182.50 15 45.19 Changed PQQ-like domain
PQQ_3 PF13570 Repeat 1244 1943 41.50 27 13.21 Changed PQQ-like domain
PRA-CH PF01502 Family 168 3692 75.10 51 36.77 Changed Phosphoribosyl-AMP cyclohydrolase
PRA-PH PF01503 Family 53 4463 91.00 30 42.54 Changed Phosphoribosyl-ATP pyrophosphohydrolase
PRA1 PF03208 Family 58 779 144.50 22 68.28 Changed PRA1 family protein
PRAI PF00697 Domain 23 3795 193.90 32 66.13 Changed N-(5'phosphoribosyl)anthranilate (PRA) isomerase
PRANC PF09372 Domain 77 463 93.10 24 17.31 Changed PRANC domain
PRAP PF15314 Family 15 33 44.80 55 28.18 New Proline-rich acidic protein 1, pregnancy-specific uterine
PRC PF05239 Domain 114 6817 76.30 21 44.59 Changed PRC-barrel domain
PrcB_C PF14343 Family 96 234 60.10 26 27.35 Changed PrcB C-terminal
PRCC PF10253 Family 43 260 214.30 19 52.85 Changed Mitotic checkpoint regulator, MAD2B-interacting
PRCH PF03967 Family 21 85 137.20 45 53.31 Changed Photosynthetic reaction centre, H-chain N-terminal region
PRD PF00874 Domain 211 15913 90.60 18 28.55 Changed PRD domain
Prd1-P2 PF09214 Domain 2 7 555.70 90 93.92 Changed Bacteriophage Prd1, adsorption protein P2
PRD_Mga PF08270 Family 13 638 210.10 29 43.86 Changed M protein trans-acting positive regulator (MGA) PRD domain
Pre-SET PF05033 Motif 86 1039 109.60 28 14.91 Changed Pre-SET motif
Prefoldin PF02996 Family 37 1254 116.60 19 50.84 Changed Prefoldin subunit
Prefoldin_2 PF01920 Family 56 1643 102.30 18 68.87 Changed Prefoldin subunit
Prefoldin_3 PF13758 Domain 23 73 97.40 41 15.65 Changed Prefoldin subunit
PRELI PF04707 Family 16 922 145.80 29 50.50 Changed PRELI-like family
Prenylcys_lyase PF07156 Family 5 325 298.00 29 68.63 Changed Prenylcysteine lyase
Prenyltrans PF00432 Repeat 69 2497 43.70 26 14.26 Changed Prenyltransferase and squalene oxidase repeat
Prenyltransf PF01255 Family 94 5931 213.10 40 85.11 Changed Putative undecaprenyl diphosphate synthase
Prenyltrans_1 PF13243 Domain 26 810 105.50 17 18.46 Changed Prenyltransferase-like
Prenyltrans_2 PF13249 Domain 105 3084 121.60 19 29.92 Changed Prenyltransferase-like
PRESAN PF09687 Domain 162 210 125.10 16 30.63 Changed Plasmodium RESA N-terminal
Presenilin PF01080 Family 6 478 264.60 37 83.85 Changed Presenilin
Preseq_ALAS PF09029 Domain 2 196 83.20 29 19.56 Changed 5-aminolevulinate synthase presequence
PRE_C2HC PF07530 Domain 10 61 64.50 22 11.32 Changed Associated with zinc fingers
PRF PF06875 Family 2 260 204.80 59 94.64 Changed Plethodontid receptivity factor PRF
PrgH PF09480 Family 8 407 296.60 47 95.75 Changed Type III secretion system protein PrgH-EprH (PrgH)
PrgI PF12666 Family 74 644 93.20 27 64.99 Changed PrgI family protein
PrgU PF09627 Domain 2 54 100.60 89 88.98 Changed PrgU-like protein
PRiA4_ORF3 PF07929 Family 18 780 155.20 21 60.93 Changed Plasmid pRiA4b ORF-3-like protein
Pribosyltran PF00156 Domain 71 30853 121.40 18 48.82 Changed Phosphoribosyl transferase domain
Pribosyltran_N PF13793 Domain 429 6720 117.60 47 35.76 Changed N-terminal domain of ribose phosphate pyrophosphokinase
Pribosyl_synth PF14572 Domain 11 6166 127.90 40 39.16 New Phosphoribosyl synthetase-associated domain
priB_priC PF07445 Family 21 862 162.00 41 94.83 Changed Primosomal replication protein priB and priC
PriCT_1 PF08708 Domain 93 1023 69.20 23 18.39 Changed Primase C terminal 1 (PriCT-1)
PriCT_2 PF08707 Domain 50 419 76.60 23 10.50 Changed Primase C terminal 2 (PriCT-2)
Prim-Pol PF09250 Domain 98 956 175.10 18 37.07 Changed Bifunctional DNA primase/polymerase, N-terminal
Prim_Zn_Ribbon PF08273 Domain 18 651 37.60 54 6.24 Changed Zinc-binding domain of primase-helicase
Prion PF00377 Domain 7 730 107.50 71 50.15 Changed Prion/Doppel alpha-helical domain
Prion_bPrPp PF11587 Family 8 461 28.10 83 11.54 Changed Major prion protein bPrPp - N terminal
Prion_octapep PF03991 Repeat 5 127 7.80 94 27.84 Changed Copper binding octapeptide repeat
Prismane PF03063 Family 251 2395 468.60 34 95.85 Changed Prismane/CO dehydrogenase family
PRK PF00485 Domain 12 8151 168.80 27 60.59 Changed Phosphoribulokinase / Uridine kinase family
PrkA PF06798 Family 43 1353 252.60 58 39.39 Changed PrkA serine protein kinase C-terminal domain
PRKCSH PF07915 Family 104 586 84.40 27 19.03 Changed Glucosidase II beta subunit-like protein
PRKCSH-like PF12999 Family 5 445 145.60 32 32.92 Changed Glucosidase II beta subunit-like
PRKCSH_1 PF13015 Family 5 406 146.00 26 30.43 Changed Glucosidase II beta subunit-like protein
PrmA PF06325 Family 31 4673 251.40 29 79.81 Changed Ribosomal protein L11 methyltransferase (PrmA)
PRMT5 PF05185 Family 35 750 345.80 25 63.15 Changed PRMT5 arginine-N-methyltransferase
pRN1_helical PF13010 Domain 9 9 132.40 48 16.02 Changed Primase helical domain
PRNT PF15174 Family 3 15 49.00 70 73.43 New Prion-related protein testis-specific
Pro-kuma_activ PF09286 Domain 124 1063 137.50 21 20.46 Changed Pro-kumamolisin, activation domain
Pro-MCH PF05824 Family 2 63 76.60 70 52.87 Changed Pro-melanin-concentrating hormone (Pro-MCH)
Pro-NT_NN PF07421 Family 3 47 151.40 68 98.12 Changed Neurotensin/neuromedin N precursor
Pro-rich PF15240 Family 16 217 107.60 39 99.71 New Proline-rich
Pro-rich_19 PF15455 Family 8 30 307.60 61 73.26 New Proline-rich 19
PRO8NT PF08082 Domain 24 428 136.00 71 7.54 Changed PRO8NT (NUC069), PrP8 N-terminal domain
PROCN PF08083 Domain 12 433 328.20 62 18.09 Changed PROCN (NUC071) domain
PROCT PF08084 Domain 32 394 107.70 55 5.71 Changed PROCT (NUC072) domain
Profilin PF00235 Domain 72 1081 121.20 33 90.65 Changed Profilin
Prog_receptor PF02161 Family 5 113 382.60 60 62.18 Changed Progesterone receptor
Proho_convert PF12177 Domain 3 51 41.00 76 5.49 Changed Prohormone convertase enzyme
Prok-E2_A PF14457 Family 12 50 146.50 22 21.40 Changed Prokaryotic E2 family A
Prok-E2_B PF14461 Family 15 108 129.40 22 23.12 Changed Prokaryotic E2 family B
Prok-E2_C PF14459 Family 4 5 129.40 59 25.17 Changed Prokaryotic E2 family C
Prok-E2_D PF14460 Family 17 151 171.90 23 72.96 Changed Prokaryotic E2 family D
Prok-E2_E PF14462 Family 5 36 123.80 31 52.33 Changed Prokaryotic E2 family E
Prok-JAB PF14464 Family 111 2146 105.60 29 49.36 Changed Prokaryotic homologs of the JAB domain
Prok-RING_1 PF14446 Family 14 24 52.80 34 12.45 Changed Prokaryotic RING finger family 1
Prok-RING_2 PF14445 Family 2 3 57.00 53 61.96 Changed Prokaryotic RING finger family 2
Prok-RING_4 PF14447 Family 10 46 54.70 37 7.14 Changed Prokaryotic RING finger family 4
Prok-TraM PF09228 Domain 14 32 100.10 36 95.07 Changed Prokaryotic Transcriptional repressor TraM
Prokineticin PF06607 Family 7 187 94.80 39 70.82 Changed Prokineticin
Prok_Ub PF14454 Family 7 94 66.90 41 79.77 Changed Prokaryotic Ubiquitin
PROL5-SMR PF15621 Family 16 60 99.30 40 68.32 New Proline-rich submaxillary gland androgen-regulated family
Prolactin_RP PF15172 Family 8 46 46.20 57 48.59 New Prolactin-releasing peptide
Prolamin_like PF05617 Domain 75 362 67.40 25 51.37 Changed Prolamin-like
Prominin PF05478 Family 14 435 541.40 21 85.92 Changed Prominin
PRONE PF03759 Family 16 263 316.50 52 68.73 Changed PRONE (Plant-specific Rop nucleotide exchanger)
Propeptide_C1 PF08127 Motif 60 407 41.70 37 13.35 Changed Peptidase family C1 propeptide
Propeptide_C25 PF08126 Motif 4 56 185.60 21 14.11 Changed Propeptide_C25
Propep_M14 PF02244 Domain 103 1016 73.10 22 16.68 Changed Carboxypeptidase activation peptide
Prophage_tail PF06605 Family 23 808 344.80 18 55.62 Changed Prophage endopeptidase tail
ProQ PF04352 Domain 46 1580 115.00 41 57.46 Changed ProQ/FINO family
ProRS-C_1 PF09180 Domain 82 1277 73.60 33 12.63 Changed Prolyl-tRNA synthetase, C-terminal
ProRS-C_2 PF09181 Domain 4 16 65.10 57 14.15 Changed Prolyl-tRNA synthetase, C-terminal
ProSAAS PF07259 Family 2 25 165.00 77 74.38 Changed ProSAAS precursor
Prosystemin PF07376 Family 3 8 197.50 82 99.87 Changed Prosystemin
Protamine_3 PF08188 Family 2 2 48.00 98 100.00 Changed Spermatozal protamine family
Protamine_P1 PF00260 Family 14 147 47.40 74 96.52 Changed Protamine P1
Protamine_P2 PF00841 Family 4 60 92.80 65 88.38 Changed Sperm histone P2
Proteasome PF00227 Domain 174 10806 173.50 21 77.89 Changed Proteasome subunit
Proteasome_A_N PF10584 Domain 74 2896 22.80 63 9.05 Changed Proteasome subunit A N-terminal signature
Proteasom_PSMB PF10508 Family 9 249 365.10 21 83.06 Changed Proteasome non-ATPase 26S subunit
Proteasom_Rpn13 PF04683 Family 78 393 86.10 40 26.93 Changed Proteasome complex subunit Rpn13 ubiquitin receptor
Protein_K PF12283 Family 2 51 55.50 78 100.00 Changed Bacteriophage protein K
Prothymosin PF03247 Family 8 185 90.50 59 75.61 Changed Prothymosin/parathymosin family
Protocadherin PF08374 Family 7 319 198.20 47 21.31 Changed Protocadherin
Protoglobin PF11563 Family 104 1086 155.20 20 36.20 Changed Protoglobin
Prot_inhib_II PF02428 Domain 10 341 48.10 62 74.95 Changed Potato type II proteinase inhibitor family
Pro_3_hydrox_C PF05373 Domain 5 13 100.30 26 34.00 Changed L-proline 3-hydroxylase, C-terminal
Pro_Al_protease PF02983 Domain 35 302 59.80 28 15.82 Changed Alpha-lytic protease prodomain
Pro_CA PF00484 Domain 497 5590 149.00 28 64.39 Changed Carbonic anhydrase
Pro_dh PF01619 Family 15 3379 291.10 31 35.23 Changed Proline dehydrogenase
Pro_dh-DNA_bdg PF14850 Domain 114 1463 113.30 63 9.56 New DNA-binding domain of Proline dehydrogenase
Pro_isomerase PF00160 Domain 168 13237 159.30 35 60.14 Changed Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Pro_racemase PF05544 Family 14 1248 313.20 35 95.24 Changed Proline racemase
Prp18 PF02840 Family 29 352 137.60 42 40.45 Changed Prp18 domain
Prp19 PF08606 Domain 30 339 69.20 57 13.94 Changed Prp19/Pso4-like
Prp19_bind PF06991 Family 5 330 231.40 35 59.81 Changed Splicing factor, Prp19-binding domain
PRP1_N PF06424 Domain 33 327 141.10 45 16.43 Changed PRP1 splicing factor, N-terminal
PRP21_like_P PF12230 Family 16 364 219.60 28 38.44 Changed Pre-mRNA splicing factor PRP21 like protein
PRP3 PF08572 Domain 21 355 212.70 39 38.51 Changed pre-mRNA processing factor 3 (PRP3)
Prp31_C PF09785 Family 28 315 129.70 42 25.27 Changed Prp31 C terminal domain
PRP38 PF03371 Family 41 560 168.00 32 51.79 Changed PRP38 family
PRP38_assoc PF12871 Domain 72 139 102.60 25 19.68 Changed Pre-mRNA-splicing factor 38-associated hydrophilic C-term
PRP4 PF08799 Domain 61 535 29.90 51 6.74 Changed pre-mRNA processing factor 4 (PRP4) like
PRP8_domainIV PF12134 Domain 14 350 220.60 76 10.05 Changed PRP8 domain IV core
PrpF PF04303 Family 6 1338 341.90 45 96.08 Changed PrpF protein
PrpR_N PF06506 Domain 47 943 172.70 37 30.19 Changed Propionate catabolism activator
PRRSV_2b PF07069 Family 2 55 72.30 84 100.00 Changed Porcine reproductive and respiratory syndrome virus 2b
PRRSV_Env PF02340 Family 4 222 230.50 83 92.22 Changed PRRSV putative envelope protein
PrsW-protease PF13367 Family 184 1339 189.90 23 55.85 Changed Protease prsW family
PRTase_1 PF11202 Family 68 350 247.50 50 60.57 Changed Phosphoribosyl transferase (PRTase)
PRTase_2 PF15609 Family 67 330 196.20 43 44.89 New Phosphoribosyl transferase
PRTase_3 PF15610 Family 17 23 273.30 30 91.63 New PRTase ComF-like
PRTP PF01366 Family 32 211 587.10 37 83.17 Changed Herpesvirus processing and transport protein
PRT_C PF08372 Family 29 485 140.40 36 18.93 Changed Plant phosphoribosyltransferase C-terminal
PRY PF13765 Family 191 3648 48.80 38 9.97 Changed SPRY-associated domain
Pr_beta_C PF12465 Family 63 391 37.50 38 13.88 Changed Proteasome beta subunits C terminal
PS-DH PF14765 Domain 177 5569 275.10 19 12.09 New Polyketide synthase dehydratase
PsaA_PsaB PF00223 Family 22 3289 538.70 58 96.78 Changed Photosystem I psaA/psaB protein
PsaD PF02531 Family 20 196 127.70 66 81.82 Changed PsaD
PsaL PF02605 Family 21 179 149.10 48 79.09 Changed Photosystem I reaction centre subunit XI
PsaM PF07465 Family 40 300 28.70 48 91.33 Changed Photosystem I protein M (PsaM)
PsaN PF05479 Family 3 69 113.70 42 77.64 Changed Photosystem I reaction centre subunit N (PSAN or PSI-N)
PsaX PF08078 Family 2 15 36.10 63 68.65 Changed PsaX family
Psb28 PF03912 Family 34 184 103.70 44 82.25 Changed Psb28 protein
PsbH PF00737 Family 19 1173 39.10 76 66.99 Changed Photosystem II 10 kDa phosphoprotein
PsbI PF02532 Family 15 674 35.40 85 96.30 Changed Photosystem II reaction centre I protein (PSII 4.8 kDa protein)
PsbJ PF01788 Family 25 1304 31.80 78 95.70 Changed PsbJ
PsbK PF02533 Family 25 756 40.60 78 72.83 Changed Photosystem II 4 kDa reaction centre component
PsbL PF02419 Family 14 1035 36.70 90 86.43 Changed PsbL protein
PsbM PF05151 Family 19 1155 26.80 81 83.33 Changed Photosystem II reaction centre M protein (PsbM)
PsbN PF02468 Family 32 1871 43.00 83 95.48 Changed Photosystem II reaction centre N protein (psbN)
PsbP PF01789 Family 30 539 160.70 22 65.89 Changed PsbP
PsbQ PF05757 Family 18 175 161.80 26 81.35 Changed Oxygen evolving enhancer protein 3 (PsbQ)
PsbR PF04725 Family 5 100 92.70 63 71.49 Changed Photosystem II 10 kDa polypeptide PsbR
PsbT PF01405 Family 3 1892 27.70 90 83.23 Changed Photosystem II reaction centre T protein
PsbU PF06514 Family 24 89 91.40 44 59.54 Changed Photosystem II 12 kDa extrinsic protein (PsbU)
PsbW PF07123 Family 9 66 117.30 50 97.19 Changed Photosystem II reaction centre W protein (PsbW)
PsbX PF06596 Family 22 156 38.30 48 46.53 Changed Photosystem II reaction centre X protein (PsbX)
PsbY PF06298 Family 22 176 35.00 45 49.48 Changed Photosystem II protein Y (PsbY)
PSCyt1 PF07635 Family 141 688 58.40 31 7.34 Changed Planctomycete cytochrome C
PSCyt2 PF07583 Family 176 580 204.70 35 22.91 Changed Protein of unknown function (DUF1549)
PSCyt3 PF07627 Family 92 252 101.80 36 12.41 Changed Protein of unknown function (DUF1588)
PSD1 PF07587 Family 41 593 244.70 30 28.00 Changed Protein of unknown function (DUF1553)
PSD2 PF07624 Family 63 199 75.30 25 9.62 Changed Protein of unknown function (DUF1585)
PSD3 PF07626 Family 66 193 67.80 31 8.22 Changed Protein of unknown function (DUF1587)
PSD4 PF07631 Family 85 245 126.60 31 15.60 Changed Protein of unknown function (DUF1592)
PSD5 PF07637 Family 81 218 63.60 29 7.82 Changed Protein of unknown function (DUF1595)
PSDC PF12588 Family 45 205 133.40 35 31.88 Changed Phophatidylserine decarboxylase
PseudoU_synth_1 PF01416 Domain 118 11373 104.70 20 69.27 Changed tRNA pseudouridine synthase
PseudoU_synth_2 PF00849 Family 57 25319 147.20 25 50.03 Changed RNA pseudouridylate synthase
PSGP PF07276 Repeat 3 74 13.00 96 81.03 Changed Apopolysialoglycoprotein (PSGP)
PSI PF01437 Family 95 2947 54.60 25 6.46 Changed Plexin repeat
PsiA PF06952 Family 7 330 217.40 69 97.79 Changed PsiA protein
PsiB PF06290 Family 5 311 137.20 79 96.56 Changed Plasmid SOS inhibition protein (PsiB)
PsiE PF06146 Family 96 1842 68.20 32 49.00 Changed Phosphate-starvation-inducible E
PsiF_repeat PF07769 Repeat 35 1450 34.50 64 64.33 Changed psiF repeat
PSII PF00421 Family 19 3769 386.90 46 96.73 Changed Photosystem II protein
PSII_BNR PF14870 Domain 23 762 140.60 23 53.77 New Photosynthesis system II assembly factor YCF48
PSII_Pbs27 PF13326 Family 61 146 141.20 29 87.46 Changed Photosystem II Pbs27
PSII_Ycf12 PF05969 Family 40 232 32.40 54 71.40 Changed Photosystem II complex subunit Ycf12
PSI_8 PF00796 Family 36 650 23.70 74 61.13 Changed Photosystem I reaction centre subunit VIII
PSI_PsaE PF02427 Domain 25 181 62.20 61 69.39 Changed Photosystem I reaction centre subunit IV / PsaE
PSI_PsaF PF02507 Family 10 178 142.20 43 86.29 Changed Photosystem I reaction centre subunit III
PSI_PsaH PF03244 Family 6 67 124.50 62 96.53 Changed Photosystem I reaction centre subunit VI
PSI_PsaJ PF01701 Family 31 684 36.80 72 80.63 Changed Photosystem I reaction centre subunit IX / PsaJ
PSI_PSAK PF01241 Family 9 219 76.60 33 73.61 Changed Photosystem I psaG / psaK
PSK PF06404 Family 39 143 80.10 35 86.39 Changed Phytosulfokine precursor protein (PSK)
PSK_trans_fac PF07704 Domain 29 347 81.60 36 96.75 Changed Rv0623-like transcription factor
PSP PF04046 Family 40 488 49.30 49 8.24 Changed PSP
PSP1 PF04468 Family 138 1828 88.50 40 24.33 Changed PSP1 C-terminal conserved region
PSP94 PF05825 Domain 6 122 86.20 31 74.93 Changed Beta-microseminoprotein (PSP-94)
PspA_IM30 PF04012 Family 11 2762 219.40 26 93.85 Changed PspA/IM30 family
PspB PF06667 Family 36 768 74.20 63 97.85 Changed Phage shock protein B
PspC PF04024 Domain 182 3398 60.70 32 37.58 Changed PspC domain
PSRP-3_Ycf65 PF04839 Family 24 145 48.90 60 35.66 Changed Plastid and cyanobacterial ribosomal protein (PSRP-3 / Ycf65)
PSRT PF07636 Motif 4 7 30.60 59 19.12 Changed PSRT
PSS PF03034 Family 18 319 251.10 42 61.24 Changed Phosphatidyl serine synthase
Psu PF07455 Family 5 269 163.10 41 85.17 Changed Phage polarity suppression protein (Psu)
PS_Dcarbxylase PF02666 Family 112 3949 203.70 27 63.28 Changed Phosphatidylserine decarboxylase
PS_pyruv_trans PF04230 Family 163 2481 275.20 15 70.68 Changed Polysaccharide pyruvyl transferase
PT PF04886 Repeat 15 489 37.20 41 7.69 Changed PT repeat
PT-HINT PF07591 Family 4 642 116.00 33 14.87 Changed Pretoxin HINT domain
PT-TG PF14449 Family 37 309 81.40 27 17.49 Changed Pre-toxin TG
PT-VENN PF04829 Family 32 725 52.90 36 4.05 Changed Pre-toxin domain with VENN motif
PTase_Orf2 PF11468 Family 12 25 292.20 28 93.44 Changed Aromatic prenyltransferase Orf2
PTA_PTB PF01515 Family 21 7061 287.60 33 59.22 Changed Phosphate acetyl/butaryl transferase
PTB PF08416 Family 14 631 127.00 29 14.53 Changed Phosphotyrosine-binding domain
PTCB-BRCT PF12738 Family 49 1637 64.10 25 10.14 Changed twin BRCT domain
PTCRA PF15028 Domain 3 29 146.70 75 63.73 New Pre-T-cell antigen receptor
PTE PF02126 Domain 4 1183 301.20 34 95.71 Changed Phosphotriesterase family
PTEN_C2 PF10409 Family 61 847 136.70 24 15.32 Changed C2 domain of PTEN tumour-suppressor protein
Pterin_4a PF01329 Domain 136 2229 90.20 32 78.95 Changed Pterin 4 alpha carbinolamine dehydratase
Pterin_bind PF00809 Domain 42 8265 202.90 28 37.28 Changed Pterin binding enzyme
PTH2 PF01981 Family 69 1006 109.50 31 60.74 Changed Peptidyl-tRNA hydrolase PTH2
PTN_MK_C PF01091 Domain 10 216 60.10 45 38.44 Changed PTN/MK heparin-binding protein family, C-terminal domain
PTN_MK_N PF05196 Domain 6 140 58.00 63 38.71 Changed PTN/MK heparin-binding protein family, N-terminal domain
PTPA PF03095 Family 53 620 265.50 37 78.11 Changed Phosphotyrosyl phosphate activator (PTPA) protein
PTPLA PF04387 Family 70 686 151.90 32 59.31 Changed Protein tyrosine phosphatase-like protein, PTPLA
PTPlike_phytase PF14566 Domain 103 540 143.50 25 39.58 New Inositol hexakisphosphate
PTPS PF01242 Domain 149 3812 126.40 30 87.70 Changed 6-pyruvoyl tetrahydropterin synthase
PTPS_related PF10131 Family 10 172 380.40 25 62.59 Changed 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
PTP_N PF12453 Family 7 91 27.30 48 5.26 Changed Protein tyrosine phosphatase N terminal
PTR PF12789 Repeat 16 1947 47.00 41 23.61 Changed Phage tail repeat like
PTR2 PF00854 Family 25 7665 304.30 20 67.32 Changed POT family
PTRF_SDPR PF15237 Family 30 215 216.10 41 68.95 New PTRF/SDPR family
PTS-HPr PF00381 Domain 168 8181 83.30 31 35.45 Changed PTS HPr component phosphorylation site
PTSIIA_gutA PF03829 Family 35 1216 117.30 39 95.66 Changed PTS system glucitol/sorbitol-specific IIA component
PTSIIB_sorb PF03830 Family 122 5348 149.20 34 73.55 Changed PTS system sorbose subfamily IIB component
PTS_2-RNA PF01885 Family 88 1070 168.10 38 78.73 Changed RNA 2'-phosphotransferase, Tpt1 / KptA family
PTS_EIIA_1 PF00358 Domain 14 7674 132.00 41 27.04 Changed phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
PTS_EIIA_2 PF00359 Family 153 18510 141.30 21 36.45 Changed Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
PTS_EIIB PF00367 Domain 138 13320 34.90 43 6.63 Changed phosphotransferase system, EIIB
PTS_EIIC PF02378 Family 55 25880 300.10 17 57.49 Changed Phosphotransferase system, EIIC
PTS_EIIC_2 PF13303 Family 67 1977 317.10 29 92.29 Changed Phosphotransferase system, EIIC
PTS_IIA PF02255 Domain 110 4200 94.80 39 88.68 Changed PTS system, Lactose/Cellobiose specific IIA subunit
PTS_IIB PF02302 Domain 245 18949 89.10 20 29.08 Changed PTS system, Lactose/Cellobiose specific IIB subunit
PUA PF01472 Family 108 4603 74.30 29 20.31 Changed PUA domain
PUA_2 PF14306 Domain 89 1267 155.00 30 31.10 Changed PUA-like domain
PUB PF09409 Domain 76 656 85.50 22 15.60 Changed PUB domain
PUCC PF03209 Family 11 317 383.60 31 84.17 Changed PUCC protein
PucR PF07905 Family 113 1282 122.10 25 24.49 Changed Purine catabolism regulatory protein-like family
PUD PF03714 Domain 39 1526 104.40 26 14.47 Changed Bacterial pullanase-associated domain
PUF PF00806 Repeat 50 6866 33.70 25 20.65 Changed Pumilio-family RNA binding repeat
PufQ PF05398 Family 11 24 74.20 43 95.60 Changed PufQ cytochrome subunit
PUL PF08324 Domain 22 406 256.60 19 36.81 Changed PUL domain
PulG PF11773 Family 9 340 79.20 58 88.03 Changed Type II secretory pathway pseudopilin
PulS_OutS PF09691 Family 8 624 99.80 72 82.95 Changed Bacterial chaperone lipoprotein (PulS_OutS)
Pup PF05639 Family 15 351 65.20 44 96.99 Changed Pup-like protein
Pup_ligase PF03136 Family 31 731 443.10 44 90.47 Changed Pup-ligase protein
PurA PF04845 Family 6 296 177.70 43 73.55 Changed PurA ssDNA and RNA-binding protein
PurS PF02700 Family 102 1833 77.80 38 68.30 Changed Phosphoribosylformylglycinamidine (FGAM) synthase
Pur_DNA_glyco PF02245 Domain 149 1752 183.20 36 88.25 Changed Methylpurine-DNA glycosylase (MPG)
PuR_N PF09182 Domain 37 1165 68.50 57 25.17 Changed Bacterial purine repressor, N-terminal
Put_DNA-bind_N PF06971 Family 17 1817 49.40 47 22.82 Changed Putative DNA-binding protein N-terminus
Put_Phosphatase PF06888 Family 9 337 208.20 31 78.97 Changed Putative Phosphatase
PV-1 PF06637 Family 2 56 320.80 46 79.83 Changed PV-1 protein (PLVAP)
PvlArgDC PF01862 Family 33 246 163.40 30 93.55 Changed Pyruvoyl-dependent arginine decarboxylase (PvlArgDC)
PVL_ORF50 PF07768 Family 6 423 113.60 54 91.85 Changed PVL ORF-50-like family
PV_NSP1 PF12433 Family 5 227 65.90 56 16.25 Changed Parvovirus non-structural protein 1
PWI PF01480 Family 34 907 72.20 28 10.85 Changed PWI domain
PWWP PF00855 Domain 273 2569 92.50 23 11.99 Changed PWWP domain
PX PF00787 Domain 71 7076 114.90 20 19.35 Changed PX domain
PXA PF02194 Family 69 830 167.90 23 19.45 Changed PXA domain
PXB PF12828 Domain 28 179 138.40 37 14.82 Changed PX-associated
PXPV PF12778 Repeat 7 141 22.60 66 23.66 Changed PXPV repeat (3 copies)
PXT1 PF15214 Family 2 16 50.90 72 56.96 New Peroxisomal testis-specific protein 1
PYC_OADA PF02436 Family 139 3341 192.00 34 23.79 Changed Conserved carboxylase domain
PYNP_C PF07831 Domain 54 2815 73.80 36 16.87 Changed Pyrimidine nucleoside phosphorylase C-terminal domain
PyocinActivator PF11112 Family 26 221 74.50 34 80.92 Changed Pyocin activator protein PrtN
Pyocin_S PF06958 Family 39 258 134.20 31 24.52 Changed S-type Pyocin
PyrBI_leader PF08052 Family 2 185 38.10 90 91.70 Changed PyrBI operon leader peptide
PyrI PF01948 Domain 60 1268 95.50 52 59.80 Changed Aspartate carbamoyltransferase regulatory chain, allosteric domain
Pyridoxal_deC PF00282 Family 11 7254 298.70 24 67.83 Changed Pyridoxal-dependent decarboxylase conserved domain
Pyridox_oxase_2 PF12766 Family 60 319 100.10 30 42.69 Changed Pyridoxamine 5'-phosphate oxidase
Pyridox_oxidase PF01243 Domain 141 8674 89.20 19 47.13 Changed Pyridoxamine 5'-phosphate oxidase
Pyridox_ox_2 PF12900 Family 153 1956 137.20 22 77.98 Changed Pyridoxamine 5'-phosphate oxidase
Pyrid_oxidase_2 PF13883 Domain 37 676 156.70 25 61.64 Changed Pyridoxamine 5'-phosphate oxidase
PYRIN PF02758 Domain 38 767 81.90 26 11.69 Changed PAAD/DAPIN/Pyrin domain
PyrI_C PF02748 Domain 70 1294 51.10 47 31.64 Changed Aspartate carbamoyltransferase regulatory chain, metal binding domain
Pyrophosphatase PF00719 Domain 157 4053 156.90 40 75.74 Changed Inorganic pyrophosphatase
Pyr_excise PF03013 Domain 26 421 114.10 37 90.02 Changed Pyrimidine dimer DNA glycosylase
Pyr_redox PF00070 Domain 130 40648 81.90 22 17.40 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_2 PF07992 Domain 139 57441 259.00 18 57.57 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3 PF13738 Family 38 7189 196.30 22 41.32 Changed Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_dim PF02852 Domain 102 18533 109.20 27 23.24 Changed Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
PYST-C1 PF09690 Domain 22 27 60.10 38 47.86 Changed Plasmodium yoelii subtelomeric region (PYST-C1)
PY_rept_46 PF09689 Domain 7 34 43.80 61 80.98 Changed Plasmodium yoelii repeat (PY_rept_46)
P_C PF06640 Family 5 26 179.70 52 62.13 Changed P protein C-terminus
P_gingi_FimA PF06321 Family 32 270 299.40 14 54.52 Changed Major fimbrial subunit protein (FimA)
P_proprotein PF01483 Family 75 1577 87.90 31 11.11 Changed Proprotein convertase P-domain
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