Please note: this site relies heavily on the use of javascript. Without a javascript-enabled browser, this site will not function correctly. Please enable javascript and reload the page, or switch to a different browser.
0  structures 1  species 0  interactions 1  sequence 1  architecture

Protein: CHD4_MOUSE (Q6PDQ2)

Summary

This is the summary of UniProt entry CHD4_MOUSE (Q6PDQ2).

Description: Chromodomain-helicase-DNA-binding protein 4 EC=3.6.4.12
Source organism: Mus musculus (Mouse) (NCBI taxonomy ID 10090)
View Pfam proteome data.
Length: 1915 amino acids

Please note: when we start each new Pfam data release, we take a copy of the UniProt sequence database. This snapshot of UniProt forms the basis of the overview that you see here. It is important to note that, although some UniProt entries may be removed after a Pfam release, these entries will not be removed from Pfam until the next Pfam data release.

Pfam domains

Source Domain Start End
disorder n/a 1 153
low_complexity n/a 29 45
low_complexity n/a 49 69
low_complexity n/a 80 92
low_complexity n/a 107 144
coiled_coil n/a 116 136
Pfam A CHDNT 156 210
disorder n/a 205 217
low_complexity n/a 217 249
disorder n/a 232 291
low_complexity n/a 271 291
disorder n/a 293 354
low_complexity n/a 296 318
low_complexity n/a 321 347
Pfam A PHD 365 410
disorder n/a 418 435
low_complexity n/a 424 443
Pfam A PHD 444 489
disorder n/a 502 531
low_complexity n/a 506 527
Pfam A Chromo 524 570
disorder n/a 571 596
Pfam A Chromo 615 667
low_complexity n/a 675 694
disorder n/a 676 678
disorder n/a 682 691
disorder n/a 696 707
Pfam A SNF2_N 722 1018
low_complexity n/a 898 912
low_complexity n/a 1044 1056
Pfam A Helicase_C 1077 1157
disorder n/a 1222 1239
disorder n/a 1250 1267
disorder n/a 1281 1299
coiled_coil n/a 1281 1301
Pfam A DUF1087 1282 1346
low_complexity n/a 1282 1300
disorder n/a 1306 1314
disorder n/a 1318 1394
low_complexity n/a 1342 1360
Pfam A DUF1086 1359 1516
disorder n/a 1435 1437
disorder n/a 1466 1479
disorder n/a 1482 1483
disorder n/a 1505 1696
low_complexity n/a 1526 1540
low_complexity n/a 1560 1578
low_complexity n/a 1590 1633
low_complexity n/a 1635 1653
coiled_coil n/a 1659 1679
low_complexity n/a 1661 1674
Pfam A CHDCT2 1727 1899
disorder n/a 1836 1845
coiled_coil n/a 1850 1870
disorder n/a 1895 1915
low_complexity n/a 1903 1915

Show or hide domain scores.

Sequence annotations

This section shows a graphical representation of this sequence, with Pfam domains shown in the standard Pfam format. Under the Pfam domain image we show various tracks, illustrating features on this sequence that we found in other databases. You can choose which databases to include using the drop-down panel under the image. More...

Note: it can take a few seconds for this image to be generated and loaded.

Loading feature alignment...

Show sources update panel.

Sequence information

This is the amino acid sequence of the UniProt sequence database entry with the accession Q6PDQ2. This sequence is stored in the Pfam database and updated with each new Pfam release, but this means that the sequence we store may differ from that stored by UniProt.

Sequence:
1
MASGLGSPSP CSAGSEEEDM DALLNNSLPP PHPENEEDPD EDLSEAETPK
50
51
LKKKKKPKKP RDPKIPKSKR QKKELGDSSG EGPEFVEEEE EVALRSDSEG
100
101
SDYTPGKKKK KKLGPKKEKK SKSKRKEEEE EEDEDDDSKE PKSSAQLLED
150
151
WGMEDIDHVF SEEDYRTLTN YKAFSQFVRP LIAAKNPKIA VSKMMMVLGA
200
201
KWREFSTNNP FKGSSGASVA AAAAAAVAVV ESMVTATEVA PPPPPVEVPI
250
251
RKAKTKEGKG PNARRKPKGS PRVPDAKKPK PKKVAPLKIK LGGFGSKRKR
300
301
SSSEDDDLDV ESDFDDASIN SYSVSDGSTS RSSRSRKKLR TAKKKKKGEE
350
351
EVTAVDGYET DHQDYCEVCQ QGGEIILCDT CPRAYHMVCL DPDMEKAPEG
400
401
KWSCPHCEKE GIQWEAKEDN SEGEEILEEV GGDPEEEDDH HMEFCRVCKD
450
451
GGELLCCDTC PSSYHIHCLN PPLPEIPNGE WLCPRCTCPA LKGKVQKILI
500
501
WKWGQPPSPT PVPRPPDADP NTPSPKPLEG RPERQFFVKW QGMSYWHCSW
550
551
VSELQLELHC QVMFRNYQRK NDMDEPPSGD FGGDEEKSRK RKNKDPKFAE
600
601
MEERFYRYGI KPEWMMIHRI LNHSVDKKGH VHYLIKWRDL PYDQASWESE
650
651
DVEIQDYDLF KQSYWNHREL MRGEEGRPGK KLKKVKLRKL ERPPETPTVD
700
701
PTVKYERQPE YLDATGGTLH PYQMEGLNWL RFSWAQGTDT ILADEMGLGK
750
751
TVQTAVFLYS LYKEGHSKGP FLVSAPLSTI INWEREFEMW APDMYVVTYV
800
801
GDKDSRAIIR ENEFSFEDNA IRGGKKASRM KKEASVKFHV LLTSYELITI
850
851
DMAILGSIDW ACLIVDEAHR LKNNQSKFFR VLNGYSLQHK LLLTGTPLQN
900
901
NLEELFHLLN FLTPERFHNL EGFLEEFADI AKEDQIKKLH DMLGPHMLRR
950
951
LKADVFKNMP SKTELIVRVE LSPMQKKYYK YILTRNFEAL NARGGGNQVS
1000
1001
LLNVVMDLKK CCNHPYLFPV AAMEAPKMPN GMYDGSALIR ASGKLLLLQK
1050
1051
MLKNLKEGGH RVLIFSQMTK MLDLLEDFLE HEGYKYERID GGITGNMRQE
1100
1101
AIDRFNAPGA QQFCFLLSTR AGGLGINLAT ADTVIIYDSD WNPHNDIQAF
1150
1151
SRAHRIGQNK KVMIYRFVTR ASVEERITQV AKKKMMLTHL VVRPGLGSKT
1200
1201
GSMSKQELDD ILKFGTEELF KDEATDGGGD NKEGEDSSVI HYDDKAIERL
1250
1251
LDRNQDETED TELQGMNEYL SSFKVAQYVV REEEMGEEEE VEREIIKQEE
1300
1301
SVDPDYWEKL LRHHYEQQQE DLARNLGKGK RIRKQVNYND GSQEDRDWQD
1350
1351
DQSDNQSDYS VASEEGDEDF DERSEAPRRP SRKGLRNDKD KPLPPLLARV
1400
1401
GGNIEVLGFN ARQRKAFLNA IMRYGMPPQD AFTTQWLVRD LRGKSEKEFK
1450
1451
AYVSLFMRHL CEPGADGAET FADGVPREGL SRQHVLTRIG VMSLIRKKVQ
1500
1501
EFEHVNGRWS MPELAEVEEN KKMSQPGSPS PKTPTPSTPG DTQPNTPAPV
1550
1551
PPAEDGIKIE ENSLKEEEST EGEKEVKSTA PEATVECAQP PAPAPATAPA
1600
1601
TATAPEDDKA PAEPPEGEEK VEKAEVKERT EEPMETEAKG TTEVEKVEEK
1650
1651
SAVDLTPIVV EDKEEKKEEE EKKDVMLQNG ETPKDLSDEK QKKNSKQRFM
1700
1701
FNIADGGFTE LHSLWQNEER AATVTKKTYE IWHRRHDYWL LAGIINHGYA
1750
1751
RWQDIQNDPR YAILNEPFKG EMNRGNFLEI KNKFLARRFK LLEQALVIEE
1800
1801
QLRRAAYLNM SEDPSHPSMA LNTRFAEVEC LAESHQHLSK ESMAGNKPAN
1850
1851
AVLHKVLKQL EELLSDMKAD VTRLPATIAR IPPVAVRLQM SERNILSRLA
1900
1901
NRAPEPPPQQ VAQQQ                                      
1915
 

Show the unformatted sequence.

Checksums:
CRC64:CFCB83B419AE6B5A
MD5:31209b36edb64054c79386af9560e3b3

TreeFam

Below is a phylogenetic tree of animal genes, with ortholog and paralog assignments, from TreeFam.